IGDB.NSCLC Chromosome View

Chromosome 7
7p22 7p21 7p15 7p14 7p13 7p12 7p11 7q11 7q21 7q22 7q31 7q32 7q33 7q34 7q35 7q36         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
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    Lung Cancer Genes with Experimental Evidence         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: up-regulation / green : down-regulation / gray : mutation)

EGFR, up, 69/125(55%) EGFR, up, 92/167(55%) EGFR, up, 47/60(78%) EGFR, up, 86/172(50%) EGFR, up, 73/130(56%) EGFR, up, 31/96(32%) EGFR, up, 94/169(56%) EGFR, up, 66/111(59%) EGFR, up, 101/130(78%) EGFR, up, 20/30(67%) EGFR, up, 58/82(71%) EGFR, up, 121/200(61%) EGFR, up, 48/72(67%) EGFR, 34.22%, 4845/14158

(Click the gene to hyperlink to gene view.)    

    Gene Expression Microarray Data         (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        HG_U95 (Meyerson, GSE2514)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      ZPBP,FC=0.15,p=0.360746801 IKZF1,FC=-0.23,p=0.051615182 IKZF1,FC=-0.05,p=0.660276038 DDC,FC=0.52,p=0.09671798 GRB10,FC=-0.06,p=0.637619159 COBL,FC=-1.29,p=1.54e-08 SEC61G,FC=0.63,p=1.09e-06 EGFR,FC=0.62,p=0.028878125 EGFR,FC=-0.12,p=0.607573493 GBAS,FC=0.04,p=0.771800959 PSPH,FC=0.95,p=0.011404608 PSPH,FC=0.80,p=0.005669543 CCT6A,FC=0.25,p=0.033700638 PHKG1,FC=0.30,p=0.023512933 ZNF273,FC=0.73,p=0.001920133 ZNF117,FC=0.14,p=0.241799252 ZNF92,FC=0.36,p=0.06415824 GUSB,FC=0.23,p=0.010149625 ASL,FC=0.03,p=0.906086651 TPST1,FC=-0.14,p=0.53233676 KCTD7,FC=0.08,p=0.53665671 KCTD7,FC=0.56,p=0.000377685 KCTD7,FC=0.24,p=0.003534323 AUTS2,FC=0.02,p=0.915096918

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      ZPBP,FC=-0.06,p=0.76792784 IKZF1,FC=-0.39,p=0.006315701 IKZF1,FC=-0.17,p=0.209401433 DDC,FC=-0.21,p=0.287330101 GRB10,FC=0.10,p=0.503741415 COBL,FC=-3.00,p=4.67e-17 SEC61G,FC=0.50,p=0.0020429 EGFR,FC=1.07,p=0.004167734 EGFR,FC=0.37,p=0.147832839 GBAS,FC=-0.17,p=0.26316763 PSPH,FC=1.54,p=0.00146832 PSPH,FC=1.30,p=0.000483266 CCT6A,FC=0.43,p=0.000890324 PHKG1,FC=-0.30,p=0.122169585 ZNF273,FC=1.17,p=0.000195749 ZNF117,FC=-0.16,p=0.339284425 ZNF92,FC=0.09,p=0.753711615 GUSB,FC=-0.29,p=0.000511644 ASL,FC=-1.04,p=0.001033731 TPST1,FC=0.21,p=0.447626269 KCTD7,FC=0.12,p=0.520925688 KCTD7,FC=0.71,p=0.00339319 KCTD7,FC=0.30,p=0.011398168 AUTS2,FC=0.04,p=0.832884892


        HG_U133A (GSE7670, GSE17475, DCLungStudy, GSE4573, GSE10072)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      ZPBP,FC=0.42,p=0.001138028 IKZF1,FC=-0.14,p=0.061877159 IKZF1,FC=-0.18,p=0.132905329 IKZF1,FC=0.15,p=0.289287756 DDC,FC=0.23,p=0.191388526 DDC,FC=-0.47,p=0.041717439 GRB10,FC=0.30,p=3.6e-06 GRB10,FC=-0.27,p=0.00226419 GRB10,FC=0.03,p=0.848653006 GRB10,FC=0.47,p=4.25e-06 COBL,FC=-1.05,p=1.62e-11 SEC61G,FC=0.97,p=8.85e-43 EGFR,FC=0.07,p=0.62967159 EGFR,FC=0.01,p=0.971040267 EGFR,FC=-0.29,p=7.03e-05 EGFR,FC=0.05,p=0.36279473 EGFR,FC=0.14,p=0.33479461 EGFR,FC=0.22,p=0.058342933 LANCL2,FC=0.45,p=9.01e-10 MRPS17,FC=0.76,p=2.9e-29 GBAS,FC=0.29,p=0.000975569 PSPH,FC=0.98,p=0.000499988 PSPH,FC=0.96,p=4.71e-18 CCT6A,FC=0.44,p=5.08e-07 CCT6A,FC=1.02,p=1.55e-42 PHKG1,FC=-0.45,p=3.13e-07 CHCHD2,FC=0.36,p=3.16e-10 ZNF107,FC=0.80,p=4.46e-10 ZNF273,FC=0.24,p=0.00051876 ZNF117,FC=0.72,p=8.88e-12 ZNF117,FC=0.52,p=0.000113056 GUSB,FC=0.30,p=0.000105042 ASL,FC=0.04,p=0.522526714 ASL,FC=0.08,p=0.287739802 ASL,FC=0.64,p=1.62e-24 TPST1,FC=0.31,p=6.81e-07 KCTD7,FC=-0.27,p=1.09e-05 C7orf42,FC=0.64,p=6.08e-29 TYW1,FC=0.07,p=0.094889216 STAG3L4,FC=-0.19,p=0.015182835 AUTS2,FC=-0.16,p=0.235127733

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      ZPBP,FC=2.15,p=6.31e-38 IKZF1,FC=-3.70,p=1.08e-69 IKZF1,FC=1.31,p=6.63e-34 IKZF1,FC=0.63,p=0.000128043 DDC,FC=0.26,p=0.011092159 DDC,FC=1.67,p=2.31e-36 GRB10,FC=-0.35,p=4.09e-05 GRB10,FC=-0.54,p=1.69e-13 GRB10,FC=1.25,p=5.51e-23 GRB10,FC=2.39,p=6.53e-80 COBL,FC=-0.59,p=3.59e-10 SEC61G,FC=-1.31,p=2.67e-16 EGFR,FC=-3.65,p=1.38e-101 EGFR,FC=3.51,p=1.13e-36 EGFR,FC=7.56,p=1.8e-194 EGFR,FC=-1.24,p=1.07e-46 EGFR,FC=4.62,p=1.43e-110 EGFR,FC=2.59,p=9.31e-112 LANCL2,FC=1.22,p=1.82e-41 MRPS17,FC=-0.73,p=1.88e-27 GBAS,FC=-0.06,p=0.488482977 PSPH,FC=1.69,p=2.85e-07 PSPH,FC=2.32,p=1.98e-45 CCT6A,FC=0.01,p=0.899826995 CCT6A,FC=1.80,p=2.32e-76 PHKG1,FC=0.88,p=1.56e-15 CHCHD2,FC=-6.99,p=3.46e-144 ZNF107,FC=2.77,p=4.31e-41 ZNF273,FC=2.12,p=1.24e-63 ZNF117,FC=-1.76,p=9.35e-28 ZNF117,FC=-3.12,p=5.78e-51 GUSB,FC=-2.11,p=1.37e-69 ASL,FC=0.83,p=5.89e-25 ASL,FC=-0.77,p=8.38e-14 ASL,FC=0.20,p=0.068047381 TPST1,FC=1.04,p=2.62e-46 KCTD7,FC=0.80,p=3.73e-29 C7orf42,FC=-4.74,p=2.42e-99 TYW1,FC=3.29,p=1.37e-123 STAG3L4,FC=1.08,p=1.35e-34 AUTS2,FC=0.75,p=6.64e-21


        HG_U133_Plus2 (GSE3141, GSE10245, GSE10445, GSE12667, GSE10799, GSE16538, GSE7307, GSE3526)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      ZPBP,FC=-0.25,p=0.178540464 IKZF1,FC=0.06,p=0.776893808 IKZF1,FC=0.45,p=0.034627091 IKZF1,FC=-0.61,p=1.08e-07 IKZF1,FC=-0.84,p=2.56e-09 IKZF1,FC=-0.75,p=1.29e-06 IKZF1,FC=0.37,p=0.085805426 IKZF1,FC=-0.07,p=0.583327777 FIGNL1,FC=1.09,p=1.02e-16 FIGNL1,FC=0.97,p=5e-21 DDC,FC=-1.04,p=0.002271502 DDC,FC=0.23,p=0.339037619 DDC,FC=-0.24,p=0.20809301 GRB10,FC=0.12,p=0.32910925 GRB10,FC=-0.71,p=7.68e-05 GRB10,FC=0.10,p=0.369098495 GRB10,FC=0.24,p=0.021172491 COBL,FC=-1.26,p=2.54e-10 COBL,FC=-1.47,p=1.33e-08 COBL,FC=-0.16,p=0.435169248 PELO,FC=-1.42,p=4.17e-37 POM121L12,FC=1.01,p=1.1e-05 POM121L12,FC=0.56,p=0.001732865 VSTM2A,FC=0.47,p=0.035445576 VSTM2A,FC=0.09,p=0.583792318 SEC61G,FC=0.68,p=1.75e-16 TCEA1,FC=-0.21,p=0.261490497 EGFR,FC=0.50,p=0.027854343 EGFR,FC=0.34,p=0.000120822 EGFR,FC=0.46,p=0.00026381 EGFR,FC=-0.46,p=0.055331971 EGFR,FC=-0.66,p=0.000325503 EGFR,FC=0.29,p=0.175864536 EGFR,FC=0.01,p=0.958697235 EGFR,FC=1.17,p=2.7e-05 EGFR,FC=-0.36,p=0.027892368 EGFR,FC=0.90,p=2.23e-05 EGFR,FC=0.42,p=0.001682164 LANCL2,FC=-0.02,p=0.925272289 LANCL2,FC=-0.29,p=0.00010867 LANCL2,FC=0.28,p=0.001387461 ZNF713,FC=-0.37,p=0.090980599 MRPS17,FC=0.96,p=3.85e-24 GBAS,FC=0.61,p=0.000291498 GBAS,FC=-0.03,p=0.744369434 PSPH,FC=0.93,p=0.003357336 PSPH,FC=1.11,p=1.86e-07 PSPH,FC=1.10,p=5.85e-20 CCT6A,FC=0.50,p=4.5e-09 CCT6A,FC=0.41,p=4.52e-08 SUMF2,FC=0.98,p=1.14e-19 PHKG1,FC=0.40,p=0.036820034 CHCHD2,FC=0.57,p=2.33e-18 GTPBP5,FC=-0.01,p=0.970165301 ZNF583,FC=0.21,p=0.322368348 DPY19L2,FC=-0.06,p=0.787103321 ZNF680,FC=0.38,p=0.001841857 ZNF107,FC=-0.40,p=0.098801127 ZNF107,FC=0.96,p=8.59e-08 ZNF107,FC=0.56,p=1.48e-06 ZNF138,FC=0.87,p=1.9e-22 ZNF273,FC=0.24,p=0.006726004 ZNF273,FC=0.48,p=0.00776581 ZNF117,FC=-0.02,p=0.927902223 ZNF117,FC=0.26,p=0.127064422 ZNF117,FC=0.56,p=1.97e-05 ZNF117,FC=1.06,p=1.8e-05 ZNF92,FC=0.49,p=4.5e-05 ZNF92,FC=0.48,p=0.035428593 ZNF92,FC=0.45,p=0.01260508 VKORC1L1,FC=0.50,p=0.000371583 GUSB,FC=0.15,p=0.054755518 ASL,FC=0.60,p=2.54e-14 ASL,FC=0.61,p=5.42e-09 ASL,FC=-0.07,p=0.422641163 TPST1,FC=-0.02,p=0.800843953 NCRNA00174,FC=0.57,p=1.78e-05 KCTD7,FC=-0.50,p=6.93e-11 KCTD7,FC=0.40,p=0.037288656 KCTD7,FC=0.21,p=0.317331443 C7orf42,FC=0.32,p=3.11e-06 C7orf42,FC=-0.46,p=7.06e-10 SBDS,FC=-1.17,p=2.19e-33 TYW1,FC=0.18,p=0.001052728 STAG3L4,FC=0.01,p=0.884325434 STAG3L4,FC=-0.00,p=0.964797603 AUTS2,FC=-1.31,p=1.44e-18 AUTS2,FC=-1.43,p=5.25e-12 AUTS2,FC=-0.74,p=1.38e-06 AUTS2,FC=-0.11,p=0.630086662 AUTS2,FC=-1.36,p=3.83e-10 AUTS2,FC=-0.86,p=6.27e-05 WBSCR17,FC=-1.24,p=1.24e-08 WBSCR17,FC=-0.18,p=0.344496479

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      ZPBP,FC=0.28,p=0.165723315 IKZF1,FC=0.04,p=0.862694067 IKZF1,FC=0.36,p=0.129674055 IKZF1,FC=-1.03,p=2.16e-11 IKZF1,FC=-1.68,p=8.72e-12 IKZF1,FC=-1.55,p=1.64e-12 IKZF1,FC=-0.36,p=0.101452112 IKZF1,FC=-0.69,p=6.39e-05 FIGNL1,FC=1.34,p=7.81e-15 FIGNL1,FC=1.07,p=2.74e-15 DDC,FC=-2.47,p=6.32e-17 DDC,FC=-0.39,p=0.05264569 DDC,FC=0.05,p=0.832870092 GRB10,FC=0.26,p=0.070062517 GRB10,FC=-0.85,p=6.24e-08 GRB10,FC=0.09,p=0.390904183 GRB10,FC=0.61,p=3.69e-07 COBL,FC=-2.99,p=6.35e-30 COBL,FC=-3.84,p=3.18e-33 COBL,FC=-0.93,p=1.12e-06 PELO,FC=-1.69,p=8.08e-32 POM121L12,FC=1.72,p=2.58e-09 POM121L12,FC=0.96,p=4.86e-07 VSTM2A,FC=0.64,p=0.009424857 VSTM2A,FC=0.02,p=0.892396871 SEC61G,FC=0.85,p=1.14e-17 TCEA1,FC=-0.59,p=0.002706796 EGFR,FC=0.65,p=0.012462796 EGFR,FC=0.34,p=0.001910324 EGFR,FC=0.86,p=2.32e-08 EGFR,FC=-0.56,p=0.010394364 EGFR,FC=-0.53,p=0.015904522 EGFR,FC=0.41,p=0.089047723 EGFR,FC=0.18,p=0.230181892 EGFR,FC=1.21,p=3.45e-06 EGFR,FC=0.28,p=0.102846725 EGFR,FC=1.13,p=1.19e-06 EGFR,FC=1.27,p=1.19e-13 LANCL2,FC=0.14,p=0.484975722 LANCL2,FC=-0.11,p=0.196439835 LANCL2,FC=0.57,p=2.48e-06 ZNF713,FC=-1.14,p=1.42e-05 MRPS17,FC=1.18,p=3.75e-21 GBAS,FC=0.62,p=0.001168185 GBAS,FC=-0.30,p=0.005631731 PSPH,FC=1.61,p=8.38e-06 PSPH,FC=1.28,p=7.23e-07 PSPH,FC=1.79,p=5.61e-20 CCT6A,FC=0.71,p=9.23e-11 CCT6A,FC=0.74,p=1.77e-11 SUMF2,FC=0.74,p=1.88e-09 PHKG1,FC=1.26,p=3.5e-09 CHCHD2,FC=0.74,p=7.23e-21 GTPBP5,FC=0.18,p=0.305191814 ZNF583,FC=0.84,p=0.000359868 DPY19L2,FC=0.07,p=0.761489118 ZNF680,FC=0.06,p=0.689241214 ZNF107,FC=0.25,p=0.382525056 ZNF107,FC=1.36,p=1.66e-09 ZNF107,FC=0.52,p=1.59e-05 ZNF138,FC=0.92,p=4.84e-17 ZNF273,FC=0.53,p=5.13e-06 ZNF273,FC=0.89,p=0.000134682 ZNF117,FC=-1.04,p=0.000232735 ZNF117,FC=-0.41,p=0.00537526 ZNF117,FC=0.51,p=0.000133942 ZNF117,FC=1.18,p=1.22e-06 ZNF92,FC=0.14,p=0.299783947 ZNF92,FC=0.18,p=0.504545385 ZNF92,FC=0.21,p=0.348777049 VKORC1L1,FC=-0.08,p=0.60950843 GUSB,FC=-0.20,p=0.019289719 ASL,FC=0.90,p=1.98e-19 ASL,FC=0.65,p=5.27e-11 ASL,FC=-0.89,p=6.77e-14 TPST1,FC=0.30,p=0.003869289 NCRNA00174,FC=0.41,p=0.003740017 KCTD7,FC=-0.66,p=1.96e-15 KCTD7,FC=-0.27,p=0.136143234 KCTD7,FC=-0.09,p=0.688066065 C7orf42,FC=0.50,p=4.7e-10 C7orf42,FC=-0.55,p=2.47e-12 SBDS,FC=-1.33,p=3.63e-24 TYW1,FC=0.28,p=5.49e-05 STAG3L4,FC=-0.15,p=0.138302023 STAG3L4,FC=0.28,p=0.012263705 AUTS2,FC=-1.43,p=3.94e-23 AUTS2,FC=-1.23,p=1.21e-07 AUTS2,FC=-0.05,p=0.640623628 AUTS2,FC=0.09,p=0.668422701 AUTS2,FC=-1.33,p=2.68e-07 AUTS2,FC=-0.48,p=0.053928358 WBSCR17,FC=-1.56,p=2.41e-12 WBSCR17,FC=-0.57,p=0.008917455


        Stanford (GSE3398)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      ZPBP,FC=-1.05,p=0.041146063 DDC,FC=0.32,p=0.564490808 GRB10,FC=0.34,p=0.398656649 SEC61G,FC=0.60,p=0.133444861 EGFR,FC=0.32,p=0.613736886 EGFR,FC=-0.22,p=0.477131183 EGFR,FC=0.19,p=0.764737625 PSPH,FC=0.70,p=0.022572284 CCT6A,FC=-1.31,p=1.15e-05 CCT6A,FC=1.09,p=0.000356403 CCT6A,FC=1.00,p=0.005649431 ZNF273,FC=1.21,p=0.039352199 ZNF117,FC=1.03,p=0.01625243 GUSB,FC=0.09,p=0.797964891 ASL,FC=-0.19,p=0.354842819

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      ZPBP,FC=-0.62,p=0.163601159 DDC,FC=0.15,p=0.804856146 GRB10,FC=0.27,p=0.415522226 SEC61G,FC=0.63,p=0.041139429 EGFR,FC=0.63,p=0.108025189 EGFR,FC=-0.35,p=0.509777198 EGFR,FC=0.30,p=0.461800626 PSPH,FC=0.98,p=0.002832394 CCT6A,FC=-1.08,p=8.67e-05 CCT6A,FC=0.99,p=0.008050117 CCT6A,FC=0.98,p=0.004642733 ZNF273,FC=0.85,p=0.045165333 ZNF117,FC=0.91,p=0.174191327 GUSB,FC=-0.50,p=0.067959499 ASL,FC=-0.55,p=0.022342396


        Agilent_HS_21.6K (GSE11969)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      ZPBP,FC=-0.10,p=0.001208668 FIGNL1,FC=0.05,p=0.111890023 DDC,FC=0.07,p=0.400753844 GRB10,FC=0.17,p=2.07e-05 GRB10,FC=-0.06,p=0.652148314 SEC61G,FC=0.20,p=0.056691356 EGFR,FC=0.03,p=0.46125061 LANCL2,FC=0.03,p=0.706346524 MRPS17,FC=0.34,p=0.006268589 GBAS,FC=0.22,p=0.010665865 PSPH,FC=0.33,p=0.009735997 CCT6A,FC=0.32,p=0.002911463 SUMF2,FC=-0.06,p=0.024029613 CHCHD2,FC=0.34,p=0.001881054 ZNF138,FC=0.06,p=0.065966467 ZNF138,FC=-0.31,p=0.003149143 ZNF273,FC=-0.00,p=0.973547305 ZNF117,FC=-0.05,p=0.328525785 ZNF92,FC=0.29,p=0.000649923 VKORC1L1,FC=0.03,p=0.627067703 GUSB,FC=-0.14,p=0.019207279 ASL,FC=-0.20,p=0.002188454 TPST1,FC=0.03,p=0.747396859 KCTD7,FC=0.09,p=0.031662773 RABGEF1,FC=-0.01,p=0.852157881 AUTS2,FC=0.17,p=0.153115619 AUTS2,FC=0.19,p=0.010858373 AUTS2,FC=0.19,p=0.064898361 WBSCR17,FC=-0.00,p=0.87262311

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      ZPBP,FC=-0.13,p=0.00058928 FIGNL1,FC=0.07,p=0.022930533 DDC,FC=0.05,p=0.4799656 GRB10,FC=0.16,p=0.000334413 GRB10,FC=0.03,p=0.864335713 SEC61G,FC=0.24,p=0.000734696 EGFR,FC=0.03,p=0.484948803 LANCL2,FC=0.12,p=0.119881119 MRPS17,FC=0.44,p=1.46e-05 GBAS,FC=0.14,p=0.007448561 PSPH,FC=0.35,p=0.019123661 CCT6A,FC=0.44,p=3.01e-07 SUMF2,FC=-0.09,p=0.002049787 CHCHD2,FC=0.35,p=4.7e-06 ZNF138,FC=0.05,p=0.116329316 ZNF138,FC=-0.33,p=0.004674381 ZNF273,FC=0.04,p=0.307508575 ZNF117,FC=-0.13,p=0.029469251 ZNF92,FC=0.30,p=8e-05 VKORC1L1,FC=-0.04,p=0.424288933 GUSB,FC=-0.23,p=0.000156108 ASL,FC=-0.33,p=0.000841739 TPST1,FC=0.22,p=0.037593917 KCTD7,FC=0.10,p=0.012377727 RABGEF1,FC=0.06,p=0.193022889 AUTS2,FC=0.17,p=0.039083081 AUTS2,FC=0.21,p=0.011025358 AUTS2,FC=0.15,p=0.054127615 WBSCR17,FC=-0.00,p=0.969887653


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    Copy Number Alteration Data        (help)
            ( red: amplification / green : deletion)

         Adenocarcinoma          Squamous Cell Carcinoma
        Meyerson Adenocarcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE17958 Squamous Cell Carcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE12280_SGOL (SCC / aCGH)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

      

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    miRNA Expression Data        (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        GSE15201
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        GSE18692
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

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    Paired (U133A/aCGH) AD Sample Data        (help) (PubMed)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

ZPBP,FC=-0.08,p=0.650975937 IKZF1,FC=0.13,p=0.096919968 IKZF1,FC=-0.27,p=0.030370911 IKZF1,FC=0.40,p=0.00926914 DDC,FC=0.11,p=0.512573314 DDC,FC=-0.92,p=7.41e-05 GRB10,FC=0.18,p=0.006970893 GRB10,FC=-0.32,p=0.000347952 GRB10,FC=0.26,p=0.122541261 GRB10,FC=0.30,p=0.006582482 COBL,FC=-1.21,p=2e-11 SEC61G,FC=0.78,p=5.32e-27 EGFR,FC=0.48,p=0.001370492 EGFR,FC=0.21,p=0.261609898 EGFR,FC=-0.57,p=1.64e-10 EGFR,FC=-0.32,p=0.000944635 EGFR,FC=0.49,p=0.002863402 EGFR,FC=0.28,p=0.02241963 LANCL2,FC=0.40,p=1.62e-06 MRPS17,FC=0.62,p=6.58e-19 GBAS,FC=0.51,p=1.84e-09 PSPH,FC=1.34,p=5.08e-05 PSPH,FC=1.20,p=1.02e-17 CCT6A,FC=0.45,p=9.35e-08 CCT6A,FC=0.93,p=6.23e-32 PHKG1,FC=-0.63,p=1.18e-08 CHCHD2,FC=0.26,p=7.52e-06 ZNF107,FC=0.99,p=1.99e-21 ZNF273,FC=0.38,p=1.06e-06 ZNF117,FC=0.98,p=3.93e-18 ZNF117,FC=0.90,p=2.52e-09 GUSB,FC=0.39,p=8.49e-08 ASL,FC=0.11,p=0.107318077 ASL,FC=0.06,p=0.428685025 ASL,FC=0.85,p=2.25e-27 TPST1,FC=0.26,p=4.65e-05 KCTD7,FC=-0.41,p=5.6e-12 C7orf42,FC=0.55,p=7.56e-22 TYW1,FC=-0.01,p=0.914930464 STAG3L4,FC=0.02,p=0.758994596 AUTS2,FC=0.04,p=0.780002641

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    Array CGH Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

RP11-95E2, 2/50, 0.04 RP11-95E2, 1/50, 0.02 RP4-718N17, 3/50, 0.06 RP4-718N17, 7/50, 0.14 RP11-324M21, 4/50, 0.08 RP11-324M21, 2/50, 0.04 RP11-449G3, 8/50, 0.16 RP11-449G3, 3/50, 0.06 RP5-1091E12, 7/50, 0.14 RP5-1091E12, 4/50, 0.08 RP11-339F13, 11/50, 0.22 RP11-339F13, 2/50, 0.04 RP4-725G10, 7/50, 0.14 RP4-725G10, 0/50, 0 RP11-10F11, 8/50, 0.16 RP11-10F11, 4/50, 0.08 RP5-905H7, 13/50, 0.26 RP5-905H7, 3/50, 0.06 RP11-340I6, 8/50, 0.16 RP11-340I6, 0/50, 0 RP11-479O9, 13/50, 0.26 RP11-479O9, 4/50, 0.08 RP4-756H11, 11/50, 0.22 RP4-756H11, 1/50, 0.02 RP11-458F8, 20/50, 0.4 RP11-458F8, 2/50, 0.04 RP4-736H5, 8/50, 0.16 RP4-736H5, 0/50, 0 RP11-358M3, 21/50, 0.42 RP11-358M3, 0/50, 0 RP11-156A14, 7/50, 0.14 RP11-156A14, 0/50, 0 RP11-3P22, 6/50, 0.12 RP11-3P22, 0/50, 0 RP4-715F13, 9/50, 0.18 RP4-715F13, 1/50, 0.02

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    CGH Minimal Deletion Region Data        (help)      Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

PMID=11391799 PMID=11748636 PMID=12367789 PMID=14581340 PMID=15093586 PMID=15093586 PMID=16322280 PMID=16322280 PMID=9591638

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    LOH Frequency Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.

Our unpublished data D7S506, 11/20, 55% Our unpublished data D7S2475, 14/31, 45% Our unpublished data D7S2550, 19/35, 54% Our unpublished data D7S659, 18/45, 40% Our unpublished data D7S2429, 18/37, 49% Our unpublished data D7S3046, 9/29, 31% PMID=10987304 D7S502, 3/20, 15%

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