IGDB.NSCLC Chromosome View

Chromosome 9
9p24 9p23 9p22 9p21 9p13 9p12 9p11 9q11 9q12 9q13 9q21 9q22 9q31 9q32 9q33 9q34         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
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    Lung Cancer Genes with Experimental Evidence         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: up-regulation / green : down-regulation / gray : mutation)

, , TAF1L, 5.66%, 3/53

(Click the gene to hyperlink to gene view.)    

    Gene Expression Microarray Data         (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        HG_U95 (Meyerson, GSE2514)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      ACO1,FC=-0.12,p=0.258262546 TOPORS,FC=-0.34,p=0.000388175 NDUFB6,FC=-0.28,p=0.224184716 DNAJA1,FC=-0.45,p=8.5e-09 DNAJA1,FC=-0.38,p=0.000143398 B4GALT1,FC=-0.15,p=0.497066493 B4GALT1,FC=0.09,p=0.343015789 SPINK4,FC=0.69,p=0.002670028 BAG1,FC=-0.48,p=3.09e-05 NFX1,FC=0.18,p=0.03993935 AQP7,FC=0.26,p=0.167311174 AQP7,FC=0.41,p=3.06e-06 AQP3,FC=-0.04,p=0.908806745 AQP3,FC=-0.12,p=0.703982888 PRSS3,FC=1.35,p=0.000254055 CNTFR,FC=-0.02,p=0.913257591 DCTN3,FC=-0.23,p=0.000721785 SIGMAR1,FC=0.58,p=5.44e-12 GALT,FC=-0.05,p=0.584350411 IL11RA,FC=-0.43,p=5.11e-06 CCL27,FC=0.13,p=0.300096844 CCL19,FC=0.98,p=0.005070566 CCL21,FC=-0.81,p=9.16e-05 C9orf144,FC=-0.06,p=0.794015039 KIAA1045,FC=-0.20,p=0.266551198 DNAJB5,FC=-0.23,p=0.193565775 VCP,FC=0.13,p=0.068316704 FANCG,FC=0.42,p=9.56e-07 PIGO,FC=0.29,p=0.008439011 STOML2,FC=0.44,p=2.32e-09 KIAA1539,FC=0.12,p=0.341286845 KIAA1539,FC=-0.06,p=0.416535838 KIAA1539,FC=0.29,p=0.00644668 UNC13B,FC=-0.51,p=0.001464889

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      ACO1,FC=-0.91,p=1.77e-10 TOPORS,FC=-0.16,p=0.279350759 NDUFB6,FC=-0.14,p=0.65953978 DNAJA1,FC=-0.53,p=2.28e-06 DNAJA1,FC=-0.41,p=0.002993344 B4GALT1,FC=-0.29,p=0.30181388 B4GALT1,FC=-0.13,p=0.291936656 SPINK4,FC=0.45,p=0.076430215 BAG1,FC=-0.46,p=0.001716284 NFX1,FC=0.38,p=0.004020317 AQP7,FC=0.21,p=0.412282028 AQP7,FC=0.30,p=0.004798435 AQP3,FC=-0.96,p=0.028902066 AQP3,FC=-1.07,p=0.003526036 PRSS3,FC=1.37,p=0.000515809 CNTFR,FC=-0.13,p=0.559271176 DCTN3,FC=-0.03,p=0.752701994 SIGMAR1,FC=0.96,p=4.51e-12 GALT,FC=-0.16,p=0.098241824 IL11RA,FC=-0.48,p=9.91e-05 CCL27,FC=0.04,p=0.817257082 CCL19,FC=0.83,p=0.04649371 CCL21,FC=-1.03,p=0.000325347 C9orf144,FC=-0.18,p=0.575028035 KIAA1045,FC=-0.20,p=0.351260563 DNAJB5,FC=-0.12,p=0.62992035 VCP,FC=0.39,p=0.002195179 FANCG,FC=0.90,p=1.4e-10 PIGO,FC=0.40,p=0.011409374 STOML2,FC=0.76,p=1.39e-08 KIAA1539,FC=0.40,p=0.054514072 KIAA1539,FC=-0.10,p=0.292507494 KIAA1539,FC=0.26,p=0.065739089 UNC13B,FC=-1.28,p=1.32e-14


        HG_U133A (GSE7670, GSE17475, DCLungStudy, GSE4573, GSE10072)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      ACO1,FC=-0.08,p=0.20513501 DDX58,FC=-0.25,p=0.013131925 TOPORS,FC=-0.36,p=1.27e-05 NDUFB6,FC=0.03,p=0.552924794 APTX,FC=-0.09,p=0.061093182 DNAJA1,FC=-0.56,p=6.89e-25 DNAJA1,FC=-0.15,p=0.014646746 SMU1,FC=0.30,p=0.000275727 B4GALT1,FC=0.15,p=0.022923214 B4GALT1,FC=0.71,p=2.37e-08 B4GALT1,FC=0.62,p=2.23e-08 B4GALT1,FC=1.04,p=4.65e-11 SPINK4,FC=0.86,p=1e-09 BAG1,FC=-0.19,p=0.014623913 BAG1,FC=-0.10,p=0.229574301 CHMP5,FC=0.25,p=0.003885045 CHMP5,FC=-0.00,p=0.953373057 NFX1,FC=1.24,p=3.25e-17 NFX1,FC=-0.18,p=0.001624956 NFX1,FC=0.48,p=3.1e-12 AQP7,FC=0.16,p=0.218411447 AQP3,FC=1.02,p=1.31e-07 AQP3,FC=0.24,p=0.174079133 AQP3,FC=0.38,p=0.007859833 NOL6,FC=0.54,p=1.39e-10 ANXA2P2,FC=-0.28,p=7.35e-05 PRSS3,FC=0.46,p=0.001068356 PRSS3,FC=0.47,p=0.000198274 UBAP2,FC=-0.22,p=9.94e-05 UBAP2,FC=-0.07,p=0.297614952 UBAP1,FC=0.11,p=0.054109342 UBAP1,FC=0.13,p=0.02677843 KIF24,FC=0.57,p=0.000103982 NUDT2,FC=0.17,p=0.330838496 DNAI1,FC=-1.07,p=2.43e-13 CNTFR,FC=0.75,p=1.69e-15 DCTN3,FC=-0.31,p=1.33e-07 SIGMAR1,FC=1.22,p=1.79e-25 SIGMAR1,FC=0.54,p=1.65e-13 GALT,FC=-0.21,p=2.31e-05 IL11RA,FC=-1.04,p=4.02e-40 CCL27,FC=0.72,p=1.38e-06 CCL19,FC=0.60,p=0.000800528 CCL21,FC=-0.50,p=0.000784307 C9orf144,FC=-0.28,p=0.066338146 KIAA1045,FC=-0.11,p=0.360883289 KIAA1045,FC=-0.34,p=2.11e-06 DNAJB5,FC=-0.03,p=0.624423427 DNAJB5,FC=-0.23,p=6.65e-05 VCP,FC=-0.17,p=0.000544628 VCP,FC=0.22,p=0.000167262 FANCG,FC=1.05,p=5.42e-24 PIGO,FC=-0.03,p=0.780698203 PIGO,FC=0.15,p=0.189734 PIGO,FC=0.09,p=0.083989327 STOML2,FC=0.62,p=3.41e-17 KIAA1539,FC=-0.41,p=3.74e-11 KIAA1539,FC=-0.35,p=2.68e-08 UNC13B,FC=-0.35,p=5.81e-05

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      ACO1,FC=-4.89,p=1.24e-143 DDX58,FC=0.21,p=0.005003859 TOPORS,FC=1.83,p=1.15e-59 NDUFB6,FC=-5.45,p=2.47e-100 APTX,FC=0.24,p=1.2e-05 DNAJA1,FC=-4.82,p=4.41e-131 DNAJA1,FC=-3.93,p=4.12e-68 SMU1,FC=3.05,p=1.03e-68 B4GALT1,FC=0.30,p=0.000181875 B4GALT1,FC=5.39,p=3.95e-101 B4GALT1,FC=0.78,p=1.13e-12 B4GALT1,FC=1.02,p=4.28e-10 SPINK4,FC=1.53,p=5.03e-37 BAG1,FC=-0.36,p=1.34e-08 BAG1,FC=-5.48,p=5.84e-177 CHMP5,FC=-1.54,p=2.38e-27 CHMP5,FC=-5.16,p=3.33e-112 NFX1,FC=1.49,p=3.7e-05 NFX1,FC=0.63,p=3.27e-10 NFX1,FC=-0.23,p=0.155143029 AQP7,FC=-0.50,p=5.19e-06 AQP3,FC=0.27,p=0.002319538 AQP3,FC=-3.47,p=1.91e-124 AQP3,FC=0.75,p=2.22e-18 NOL6,FC=-2.09,p=2.83e-42 ANXA2P2,FC=-4.60,p=1.54e-129 PRSS3,FC=-0.71,p=1.44e-12 PRSS3,FC=0.73,p=2.89e-11 UBAP2,FC=-3.70,p=9.85e-97 UBAP2,FC=0.22,p=0.000864288 UBAP1,FC=0.34,p=3.78e-09 UBAP1,FC=0.13,p=0.014974787 KIF24,FC=2.88,p=7.62e-58 NUDT2,FC=4.23,p=3.54e-72 DNAI1,FC=-3.31,p=1.74e-60 CNTFR,FC=-3.51,p=1.67e-91 DCTN3,FC=-1.37,p=1.3e-18 SIGMAR1,FC=2.17,p=5.28e-53 SIGMAR1,FC=0.61,p=2.8e-15 GALT,FC=1.01,p=9.74e-14 IL11RA,FC=-1.70,p=1.55e-28 CCL27,FC=4.11,p=6.43e-94 CCL19,FC=0.64,p=3.85e-07 CCL21,FC=0.10,p=0.379615156 C9orf144,FC=3.53,p=1.39e-76 KIAA1045,FC=3.20,p=4.53e-58 KIAA1045,FC=0.78,p=7.8e-18 DNAJB5,FC=1.23,p=7.04e-17 DNAJB5,FC=1.21,p=3.96e-34 VCP,FC=-2.18,p=9.6e-40 VCP,FC=-0.44,p=3.86e-08 FANCG,FC=2.02,p=2.09e-50 PIGO,FC=1.77,p=4.24e-18 PIGO,FC=1.20,p=1.81e-21 PIGO,FC=-1.01,p=4.7e-35 STOML2,FC=1.91,p=4.01e-50 KIAA1539,FC=-3.24,p=1.03e-63 KIAA1539,FC=-3.44,p=1.39e-81 UNC13B,FC=-0.83,p=6.7e-15


        HG_U133_Plus2 (GSE3141, GSE10245, GSE10445, GSE12667, GSE10799, GSE16538, GSE7307, GSE3526)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      LINGO2,FC=0.91,p=2.58e-08 HCG18,FC=0.09,p=0.28557733 ACO1,FC=0.06,p=0.469479522 DDX58,FC=-0.21,p=0.065577489 DDX58,FC=-0.03,p=0.700868292 DDX58,FC=0.05,p=0.663709055 TOPORS,FC=-0.21,p=0.03532937 NDUFB6,FC=-0.00,p=0.985768718 NDUFB6,FC=-0.09,p=0.156941709 TAF1L,FC=-0.20,p=0.213923823 APTX,FC=-0.05,p=0.790912851 APTX,FC=0.28,p=9.93e-06 APTX,FC=0.34,p=1.08e-05 DNAJA1,FC=-0.58,p=2.59e-17 DNAJA1,FC=-0.31,p=0.000340144 SMU1,FC=0.06,p=0.527753572 SMU1,FC=-0.51,p=5.34e-10 SMU1,FC=-0.44,p=2.17e-05 SMU1,FC=-0.66,p=9.57e-08 B4GALT1,FC=1.17,p=8.31e-09 B4GALT1,FC=-0.61,p=0.000547651 B4GALT1,FC=0.32,p=0.049329714 B4GALT1,FC=1.07,p=3.9e-15 B4GALT1,FC=1.11,p=7.41e-14 SPINK4,FC=0.98,p=7.7e-05 BAG1,FC=-0.14,p=0.26494834 BAG1,FC=-0.27,p=0.005614435 BAG1,FC=-0.40,p=0.000133612 CHMP5,FC=-0.10,p=0.349403169 CHMP5,FC=0.09,p=0.353367496 LOC284100,FC=0.45,p=0.000750934 NFX1,FC=-0.30,p=0.007550764 NFX1,FC=-0.64,p=2.28e-08 NFX1,FC=-0.26,p=0.039506809 NFX1,FC=-0.98,p=4.8e-08 NFX1,FC=-0.27,p=2.86e-05 AQP7,FC=0.18,p=0.303214651 AQP3,FC=-0.18,p=0.41380121 AQP3,FC=-0.72,p=0.000439716 AQP3,FC=0.19,p=0.344693108 NOL6,FC=0.52,p=0.000717523 NOL6,FC=0.28,p=0.00884804 NOL6,FC=0.77,p=4.42e-05 NOL6,FC=0.35,p=0.002075044 ANXA2P2,FC=-0.45,p=1.8e-06 PRSS3,FC=1.40,p=3.95e-09 PRSS3,FC=1.09,p=3.42e-07 UBE2R2,FC=0.18,p=0.011475468 UBE2R2,FC=0.27,p=0.000273541 UBAP2,FC=0.23,p=0.002650321 UBAP2,FC=0.35,p=4.37e-05 DCAF12,FC=0.59,p=3.3e-13 UBAP1,FC=0.29,p=0.000139064 UBAP1,FC=0.18,p=0.011696455 KIF24,FC=0.92,p=1.97e-05 NUDT2,FC=-0.42,p=0.002378587 KIAA1161,FC=0.07,p=0.607152943 C9orf24,FC=-2.00,p=4.15e-13 C9orf25,FC=-0.14,p=0.160194434 DNAI1,FC=0.47,p=0.000416768 DNAI1,FC=-1.42,p=4.19e-09 ENHO,FC=-0.29,p=0.070417524 CNTFR,FC=0.25,p=0.063341568 C9orf23,FC=0.48,p=1.62e-11 DCTN3,FC=-0.07,p=0.210064497 SIGMAR1,FC=0.70,p=6.03e-15 SIGMAR1,FC=0.74,p=3.04e-10 GALT,FC=0.33,p=0.007811051 GALT,FC=0.13,p=0.501330819 GALT,FC=0.06,p=0.238103253 IL11RA,FC=-0.83,p=4.89e-15 IL11RA,FC=0.12,p=0.274834913 CCL27,FC=0.15,p=0.47826546 CCL19,FC=0.48,p=0.046014177 CCL21,FC=-0.68,p=0.000379695 C9orf144B,FC=-1.43,p=4.66e-07 C9orf144,FC=-0.16,p=0.422912577 KIAA1045,FC=0.48,p=0.005100661 KIAA1045,FC=-0.36,p=0.011868394 DNAJB5,FC=-0.38,p=4.67e-05 DNAJB5,FC=-0.08,p=0.616248656 C9orf131,FC=0.29,p=0.076253248 VCP,FC=0.12,p=0.044146162 VCP,FC=0.13,p=0.049263789 FANCG,FC=1.02,p=1.73e-31 PIGO,FC=0.31,p=0.106625225 PIGO,FC=-0.09,p=0.573316716 PIGO,FC=0.21,p=0.004001863 STOML2,FC=0.31,p=0.003452257 KIAA1539,FC=-0.27,p=0.000716664 KIAA1539,FC=0.24,p=0.003045255 UNC13B,FC=-0.36,p=0.042882229 UNC13B,FC=0.56,p=1.76e-06

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      LINGO2,FC=1.41,p=3.45e-16 HCG18,FC=-0.31,p=0.000633417 ACO1,FC=-0.22,p=0.019536021 DDX58,FC=-0.61,p=0.000165092 DDX58,FC=-0.17,p=0.114802617 DDX58,FC=0.21,p=0.094763709 TOPORS,FC=-0.51,p=1.85e-05 NDUFB6,FC=0.06,p=0.716739112 NDUFB6,FC=-0.07,p=0.403157627 TAF1L,FC=-0.12,p=0.547069482 APTX,FC=-0.64,p=0.002204213 APTX,FC=0.66,p=1.22e-11 APTX,FC=0.67,p=1.79e-10 DNAJA1,FC=-0.89,p=4.87e-21 DNAJA1,FC=-0.63,p=6e-10 SMU1,FC=-0.11,p=0.453800619 SMU1,FC=-0.48,p=2.11e-05 SMU1,FC=-0.29,p=0.003452357 SMU1,FC=-0.70,p=4.02e-11 B4GALT1,FC=0.84,p=0.000815963 B4GALT1,FC=-1.12,p=8.45e-16 B4GALT1,FC=0.71,p=0.000187164 B4GALT1,FC=1.27,p=3.51e-15 B4GALT1,FC=1.28,p=1.01e-10 SPINK4,FC=0.86,p=8.01e-05 BAG1,FC=-0.33,p=0.014959541 BAG1,FC=-0.32,p=0.000991441 BAG1,FC=-0.71,p=3.71e-10 CHMP5,FC=-0.36,p=0.002531951 CHMP5,FC=-0.37,p=0.000922915 LOC284100,FC=0.50,p=0.002103842 NFX1,FC=-0.51,p=0.000582963 NFX1,FC=-1.05,p=1.02e-11 NFX1,FC=-0.52,p=0.00306684 NFX1,FC=-1.27,p=1.03e-10 NFX1,FC=-0.18,p=0.034627599 AQP7,FC=-0.49,p=0.01376216 AQP3,FC=-0.89,p=0.000597511 AQP3,FC=-2.01,p=1.57e-14 AQP3,FC=-0.28,p=0.247343093 NOL6,FC=0.86,p=4.43e-06 NOL6,FC=0.56,p=3.22e-05 NOL6,FC=1.07,p=3.51e-06 NOL6,FC=0.64,p=4.07e-05 ANXA2P2,FC=-0.34,p=0.002011055 PRSS3,FC=1.74,p=1.34e-17 PRSS3,FC=1.42,p=1.06e-22 UBE2R2,FC=0.36,p=2.22e-05 UBE2R2,FC=0.44,p=3.63e-05 UBAP2,FC=0.50,p=4.72e-07 UBAP2,FC=0.77,p=5.46e-11 DCAF12,FC=0.52,p=9.27e-08 UBAP1,FC=0.30,p=0.004556635 UBAP1,FC=0.12,p=0.219889629 KIF24,FC=0.91,p=0.000380248 NUDT2,FC=-0.31,p=0.075278447 KIAA1161,FC=0.04,p=0.769656304 C9orf24,FC=-2.56,p=2.33e-15 C9orf25,FC=0.41,p=0.000333502 DNAI1,FC=0.76,p=1.01e-05 DNAI1,FC=-1.50,p=2.05e-07 ENHO,FC=-0.28,p=0.101227593 CNTFR,FC=1.05,p=7.79e-14 C9orf23,FC=0.46,p=1.83e-08 DCTN3,FC=-0.02,p=0.813663033 SIGMAR1,FC=1.03,p=4.91e-20 SIGMAR1,FC=1.19,p=6.74e-18 GALT,FC=0.35,p=0.028106855 GALT,FC=-0.12,p=0.568870712 GALT,FC=-0.22,p=0.002896966 IL11RA,FC=-1.07,p=1.05e-12 IL11RA,FC=0.57,p=1.85e-05 CCL27,FC=1.01,p=6.5e-05 CCL19,FC=0.14,p=0.605650519 CCL21,FC=-1.08,p=3.63e-06 C9orf144B,FC=-1.97,p=1.38e-12 C9orf144,FC=-0.19,p=0.382293633 KIAA1045,FC=1.14,p=5.79e-08 KIAA1045,FC=0.04,p=0.800273168 DNAJB5,FC=-0.11,p=0.24954192 DNAJB5,FC=-0.08,p=0.685528785 C9orf131,FC=0.68,p=0.000783755 VCP,FC=0.48,p=3.01e-08 VCP,FC=0.42,p=8.74e-07 FANCG,FC=1.61,p=4.87e-39 PIGO,FC=0.57,p=0.009584896 PIGO,FC=0.01,p=0.978154521 PIGO,FC=0.52,p=3.94e-08 STOML2,FC=0.49,p=1.07e-05 KIAA1539,FC=-0.35,p=0.001305345 KIAA1539,FC=0.37,p=0.000631688 UNC13B,FC=-0.85,p=1.09e-05 UNC13B,FC=0.45,p=2.12e-05


        Stanford (GSE3398)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      ACO1,FC=-0.05,p=0.87149071 NDUFB6,FC=0.17,p=0.629859241 B4GALT1,FC=-0.22,p=0.613324699 B4GALT1,FC=0.19,p=0.64038009 SPINK4,FC=-0.22,p=0.495086619 SPINK4,FC=0.45,p=0.416591851 NFX1,FC=0.51,p=0.062601883 AQP7,FC=-0.45,p=0.389785391 AQP7,FC=0.14,p=0.639235954 AQP7,FC=-0.24,p=0.566591692 AQP7,FC=0.06,p=0.8681312 AQP3,FC=-0.47,p=0.517611531 DNAI1,FC=-1.49,p=0.000366816 GALT,FC=0.38,p=0.133187627 IL11RA,FC=-0.04,p=0.885769344 IL11RA,FC=-0.33,p=0.111715971 IL11RA,FC=0.21,p=0.566522966 KIAA1045,FC=-0.54,p=0.215046386 FANCG,FC=1.16,p=0.000105543

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      ACO1,FC=-0.98,p=0.001161461 NDUFB6,FC=0.48,p=0.154992342 B4GALT1,FC=-0.25,p=0.519336601 B4GALT1,FC=-0.22,p=0.452181743 SPINK4,FC=-0.04,p=0.890489066 SPINK4,FC=0.81,p=0.10874521 NFX1,FC=0.33,p=0.299146484 AQP7,FC=-0.59,p=0.376166702 AQP7,FC=-0.28,p=0.261753306 AQP7,FC=-0.87,p=0.036089472 AQP7,FC=-0.31,p=0.360669625 AQP3,FC=-2.39,p=0.000426757 DNAI1,FC=-1.39,p=0.049496354 GALT,FC=-0.17,p=0.610876057 IL11RA,FC=-0.33,p=0.263066825 IL11RA,FC=-1.01,p=9.98e-05 IL11RA,FC=0.28,p=0.440428965 KIAA1045,FC=-0.10,p=0.855137719 FANCG,FC=1.47,p=2.36e-05


        Agilent_HS_21.6K (GSE11969)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      ACO1,FC=0.01,p=0.719647663 DDX58,FC=0.00,p=0.999807427 NDUFB6,FC=0.22,p=0.003216197 APTX,FC=0.25,p=0.000631698 DNAJA1,FC=-0.09,p=0.311156423 SMU1,FC=-0.05,p=0.527094334 B4GALT1,FC=0.11,p=0.07395179 SPINK4,FC=-0.02,p=0.346657205 BAG1,FC=-0.05,p=0.510805547 NFX1,FC=0.02,p=0.243564786 AQP7,FC=-0.04,p=0.356427332 AQP3,FC=-0.20,p=0.080465882 NOL6,FC=0.07,p=0.075275861 PRSS3,FC=0.05,p=0.18709278 UBE2R2,FC=0.02,p=0.433793641 UBAP2,FC=0.04,p=0.026120589 UBAP1,FC=0.00,p=0.990525643 KIF24,FC=0.08,p=0.389976753 NUDT2,FC=0.03,p=0.720877161 C9orf24,FC=-0.61,p=0.000195439 C9orf25,FC=-0.05,p=0.038573101 DNAI1,FC=0.07,p=0.094903149 CNTFR,FC=-0.04,p=0.049389753 C9orf23,FC=-0.01,p=0.793973147 DCTN3,FC=-0.04,p=0.339007374 GALT,FC=-0.15,p=0.013113459 IL11RA,FC=-0.07,p=6.3e-07 CCL27,FC=0.02,p=0.673852002 CCL19,FC=0.09,p=0.581033075 CCL21,FC=-0.06,p=0.024103796 DNAJB5,FC=-0.11,p=0.000909227 VCP,FC=-0.08,p=0.067022078 FANCG,FC=0.11,p=0.029110091 PIGO,FC=-0.09,p=0.000311033 STOML2,FC=0.04,p=0.507409761 KIAA1539,FC=-0.04,p=0.397279306 UNC13B,FC=0.09,p=0.148540832 UNC13B,FC=-0.23,p=2.38e-05

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      ACO1,FC=-0.06,p=0.043249288 DDX58,FC=-0.13,p=0.116966578 NDUFB6,FC=0.28,p=6.4e-05 APTX,FC=0.30,p=0.000239377 DNAJA1,FC=-0.15,p=0.052721903 SMU1,FC=-0.02,p=0.79262284 B4GALT1,FC=0.09,p=0.08958469 SPINK4,FC=-0.03,p=0.287003982 BAG1,FC=-0.03,p=0.677067118 NFX1,FC=-0.00,p=0.879271274 AQP7,FC=-0.04,p=0.309247341 AQP3,FC=-0.31,p=0.000118354 NOL6,FC=0.06,p=0.122404457 PRSS3,FC=0.05,p=0.008273489 UBE2R2,FC=0.04,p=0.18730631 UBAP2,FC=0.05,p=0.008815926 UBAP1,FC=-0.02,p=0.485204789 KIF24,FC=0.01,p=0.941895393 NUDT2,FC=0.18,p=0.012654785 C9orf24,FC=-0.63,p=0.000132081 C9orf25,FC=-0.02,p=0.43733127 DNAI1,FC=0.08,p=0.142002036 CNTFR,FC=-0.04,p=0.065524227 C9orf23,FC=-0.00,p=0.948045012 DCTN3,FC=-0.02,p=0.563357085 GALT,FC=-0.29,p=7.81e-06 IL11RA,FC=-0.09,p=7.63e-06 CCL27,FC=-0.02,p=0.559848614 CCL19,FC=-0.01,p=0.954070445 CCL21,FC=-0.07,p=0.015296174 DNAJB5,FC=-0.14,p=0.003319836 VCP,FC=-0.05,p=0.228699683 FANCG,FC=0.15,p=0.001454405 PIGO,FC=-0.08,p=0.000990668 STOML2,FC=0.14,p=0.028474121 KIAA1539,FC=-0.05,p=0.289173012 UNC13B,FC=0.11,p=0.029000413 UNC13B,FC=-0.32,p=3.38e-09


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    Copy Number Alteration Data        (help)
            ( red: amplification / green : deletion)

         Adenocarcinoma          Squamous Cell Carcinoma
        Meyerson Adenocarcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE17958 Squamous Cell Carcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE12280_SGOL (SCC / aCGH)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

      

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    miRNA Expression Data        (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        GSE15201
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        GSE18692
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

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    Paired (U133A/aCGH) AD Sample Data        (help) (PubMed)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

ACO1,FC=-0.16,p=0.00636814 DDX58,FC=-0.08,p=0.315552752 TOPORS,FC=-0.09,p=0.267288199 NDUFB6,FC=-0.01,p=0.900146875 APTX,FC=-0.18,p=6.07e-05 DNAJA1,FC=-0.68,p=1.45e-30 DNAJA1,FC=0.00,p=0.992088238 SMU1,FC=0.36,p=0.000149964 B4GALT1,FC=0.27,p=0.001140922 B4GALT1,FC=1.23,p=6.48e-18 B4GALT1,FC=0.68,p=5.48e-08 B4GALT1,FC=1.91,p=2.8e-27 SPINK4,FC=0.55,p=0.000621497 BAG1,FC=-0.33,p=0.000339564 BAG1,FC=-0.13,p=0.136183444 CHMP5,FC=0.41,p=1.85e-06 CHMP5,FC=-0.02,p=0.743171288 NFX1,FC=1.67,p=1.71e-24 NFX1,FC=-0.20,p=0.000154603 NFX1,FC=0.40,p=3.52e-06 AQP7,FC=0.29,p=0.056909358 AQP3,FC=1.42,p=1.11e-11 AQP3,FC=0.66,p=0.000156122 AQP3,FC=0.68,p=4.29e-05 NOL6,FC=0.60,p=1.88e-10 ANXA2P2,FC=-0.30,p=9.88e-06 PRSS3,FC=0.21,p=0.156174649 PRSS3,FC=0.31,p=0.020653042 UBAP2,FC=-0.25,p=2.18e-06 UBAP2,FC=-0.01,p=0.887903747 UBAP1,FC=-0.04,p=0.489701376 UBAP1,FC=0.08,p=0.189953048 KIF24,FC=0.29,p=0.105284419 NUDT2,FC=0.37,p=0.070009213 DNAI1,FC=-1.40,p=5.54e-13 CNTFR,FC=0.92,p=1.08e-23 DCTN3,FC=-0.43,p=3.07e-11 SIGMAR1,FC=1.18,p=1.8e-17 SIGMAR1,FC=0.62,p=5.95e-16 GALT,FC=-0.12,p=0.009424906 IL11RA,FC=-0.92,p=2.99e-29 CCL27,FC=1.39,p=4.64e-15 CCL19,FC=0.75,p=2.58e-05 CCL21,FC=-0.75,p=1.44e-05 C9orf144,FC=-0.43,p=0.008402374 KIAA1045,FC=0.21,p=0.107589588 KIAA1045,FC=-0.98,p=1.76e-13 DNAJB5,FC=0.26,p=0.040249091 DNAJB5,FC=-0.26,p=5.86e-06 VCP,FC=-0.04,p=0.479549141 VCP,FC=0.26,p=4.24e-05 FANCG,FC=1.20,p=5.28e-22 PIGO,FC=0.43,p=0.00090308 PIGO,FC=0.38,p=0.003979791 PIGO,FC=0.05,p=0.395844599 STOML2,FC=0.40,p=2.6e-07 KIAA1539,FC=-0.51,p=2.04e-13 KIAA1539,FC=-0.47,p=3.49e-12 UNC13B,FC=-1.00,p=9.31e-21

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    Array CGH Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

RP11-20P5, 3/50, 0.06 RP11-20P5, 13/50, 0.26 RP11-264J11, 5/50, 0.1 RP11-264J11, 17/50, 0.34 RP11-383F6, 3/50, 0.06 RP11-383F6, 21/50, 0.42 RP11-48L13, 3/50, 0.06 RP11-48L13, 10/50, 0.2

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    CGH Minimal Deletion Region Data        (help)      Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

PMID=14581340 PMID=15548372 PMID=15983384

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    LOH Frequency Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.

Our unpublished data D9S1853, 11/36, 31% Our unpublished data D9S1118, 15/36, 42% PMID=10987304 D9S1817, 14/20, 70% PMID=11980668 D9S251, 16/33, 48% D9S1118, 9/26, 35% PMID=15900585 D9S1118, 10/18, 56%

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