IGDB.NSCLC Chromosome View

Chromosome 13
13p13 13p12 13p11 13q11 13q12 13q13 13q14 13q21 13q22 13q31 13q32 13q33 13q34         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
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    Lung Cancer Genes with Experimental Evidence         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: up-regulation / green : down-regulation / gray : mutation)

ING1, down, 37/88(42%) STK11, 8.43%, 128/1518 TFDP1, 2.12%, 4/189

(Click the gene to hyperlink to gene view.)    

    Gene Expression Microarray Data         (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        HG_U95 (Meyerson, GSE2514)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      IRS2,FC=0.68,p=1.29e-06 COL4A1,FC=-0.45,p=0.001970179 COL4A2,FC=-0.65,p=3.07e-07 ING1,FC=-0.14,p=0.425427061 ARHGEF7,FC=-0.20,p=0.039978981 SOX1,FC=0.66,p=0.000119484 SOX1,FC=0.37,p=1.3e-05 TUBGCP3,FC=-0.21,p=0.041868779 ATP11A,FC=0.05,p=0.747157023 ATP11A,FC=-0.04,p=0.86444181 ATP11A,FC=0.24,p=0.24414501 MCF2L,FC=0.22,p=0.046669337 F7,FC=0.63,p=5.01e-08 F10,FC=-1.00,p=4.1e-08 PROZ,FC=0.07,p=0.70673883 CUL4A,FC=-0.40,p=0.14182981 LAMP1,FC=-0.32,p=3.42e-06 TFDP1,FC=0.26,p=0.019396093 TFDP1,FC=0.13,p=0.639586019 ATP4B,FC=0.26,p=0.154149599 RASA3,FC=0.28,p=0.115598551 CDC16,FC=0.05,p=0.492872757 UPF3A,FC=0.12,p=0.176786675

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      IRS2,FC=0.73,p=5.25e-05 COL4A1,FC=-0.35,p=0.013888379 COL4A2,FC=-0.50,p=0.000943106 ING1,FC=-0.35,p=0.108263674 ARHGEF7,FC=-0.26,p=0.013595851 SOX1,FC=1.50,p=1.25e-07 SOX1,FC=0.35,p=0.000703589 TUBGCP3,FC=-0.52,p=0.002174341 ATP11A,FC=-1.29,p=5.86e-17 ATP11A,FC=-1.11,p=4.2e-06 ATP11A,FC=-2.20,p=3.37e-08 MCF2L,FC=0.10,p=0.476618853 F7,FC=0.72,p=1.72e-05 F10,FC=-1.72,p=8.36e-14 PROZ,FC=-0.00,p=0.991623438 CUL4A,FC=-0.53,p=0.192400009 LAMP1,FC=-0.39,p=8.74e-06 TFDP1,FC=0.74,p=1.84e-06 TFDP1,FC=0.69,p=0.104106685 ATP4B,FC=0.09,p=0.730697877 RASA3,FC=0.74,p=0.002277728 CDC16,FC=-0.15,p=0.141430372 UPF3A,FC=-0.03,p=0.825547092


        HG_U133A (GSE7670, GSE17475, DCLungStudy, GSE4573, GSE10072)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      IRS2,FC=-0.24,p=0.068193704 IRS2,FC=-0.21,p=0.042118816 COL4A1,FC=0.09,p=0.413056258 COL4A1,FC=-0.22,p=0.003289188 COL4A2,FC=-0.58,p=5.12e-11 COL4A2,FC=-0.13,p=0.190063465 RAB20,FC=-0.23,p=5.11e-05 CARKD,FC=0.10,p=0.160721594 CARS2,FC=-0.03,p=0.583852965 ING1,FC=0.98,p=9.71e-09 ING1,FC=0.14,p=0.008447954 ING1,FC=0.11,p=0.228760404 ANKRD10,FC=-0.03,p=0.736959745 ARHGEF7,FC=-0.04,p=0.465659319 ARHGEF7,FC=-0.58,p=1.68e-25 SOX1,FC=-0.23,p=0.000581495 TUBGCP3,FC=0.65,p=5.33e-11 TUBGCP3,FC=0.08,p=0.347907264 ATP11A,FC=1.52,p=1.57e-21 ATP11A,FC=0.23,p=0.065336852 MCF2L,FC=-0.01,p=0.952928228 F7,FC=-0.41,p=3.9e-07 F10,FC=-0.93,p=9.86e-13 PROZ,FC=-0.44,p=1.43e-06 PCID2,FC=0.03,p=0.542680357 CUL4A,FC=0.07,p=0.435400591 CUL4A,FC=0.19,p=0.000721722 LAMP1,FC=-0.36,p=3.64e-14 LAMP1,FC=-0.22,p=5.78e-05 LAMP1,FC=1.14,p=5.43e-22 LAMP1,FC=0.54,p=4.85e-06 GRTP1,FC=-0.44,p=0.003196595 DCUN1D2,FC=-0.09,p=0.145340026 TMCO3,FC=0.56,p=5.69e-07 TMCO3,FC=0.32,p=0.006646628 TFDP1,FC=0.48,p=5e-15 TFDP1,FC=0.32,p=0.000123217 ATP4B,FC=0.06,p=0.600494026 GAS6,FC=-1.63,p=6.58e-41 GAS6,FC=-1.28,p=9.75e-50 RASA3,FC=-0.13,p=0.316377998 RASA3,FC=0.17,p=0.071291154 CDC16,FC=-0.42,p=1.73e-12 CDC16,FC=-0.27,p=1.62e-07 CDC16,FC=-0.29,p=8.98e-10 UPF3A,FC=-0.05,p=0.548973249 UPF3A,FC=-0.04,p=0.534345405 UPF3A,FC=0.17,p=0.099205516 UPF3A,FC=0.23,p=0.000512215

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      IRS2,FC=0.53,p=9.44e-15 IRS2,FC=2.32,p=3.07e-94 COL4A1,FC=-1.57,p=7.47e-38 COL4A1,FC=-5.87,p=8.26e-142 COL4A2,FC=-7.43,p=1.52e-174 COL4A2,FC=-4.11,p=1.19e-83 RAB20,FC=-3.88,p=4.91e-79 CARKD,FC=-5.99,p=9.35e-103 CARS2,FC=-6.09,p=1.85e-93 ING1,FC=1.22,p=7.53e-13 ING1,FC=-2.51,p=1.54e-38 ING1,FC=-2.96,p=7.05e-68 ANKRD10,FC=-3.22,p=1.93e-49 ARHGEF7,FC=1.54,p=3.78e-63 ARHGEF7,FC=-1.74,p=1.59e-30 SOX1,FC=5.82,p=3.92e-119 TUBGCP3,FC=1.53,p=1.22e-26 TUBGCP3,FC=1.09,p=1.13e-39 ATP11A,FC=-1.26,p=5.76e-11 ATP11A,FC=3.17,p=5.09e-45 MCF2L,FC=2.30,p=1.71e-48 F7,FC=-1.94,p=2.78e-20 F10,FC=1.40,p=1.51e-40 PROZ,FC=-2.71,p=1.39e-48 PCID2,FC=-0.92,p=5.14e-39 CUL4A,FC=1.88,p=8.53e-73 CUL4A,FC=1.89,p=1.6e-82 LAMP1,FC=-1.13,p=2.87e-23 LAMP1,FC=-1.16,p=2.96e-49 LAMP1,FC=3.46,p=2.34e-67 LAMP1,FC=1.35,p=8.56e-34 GRTP1,FC=-0.49,p=0.021611503 DCUN1D2,FC=1.39,p=1.21e-58 TMCO3,FC=0.11,p=0.322708952 TMCO3,FC=-0.57,p=0.000361204 TFDP1,FC=-1.10,p=6.85e-30 TFDP1,FC=1.15,p=3.42e-32 ATP4B,FC=2.34,p=8.13e-49 GAS6,FC=-0.54,p=2.55e-08 GAS6,FC=-7.72,p=2.99e-130 RASA3,FC=3.07,p=2.97e-82 RASA3,FC=5.98,p=2.81e-51 CDC16,FC=-1.35,p=1.23e-54 CDC16,FC=-0.92,p=2.36e-35 CDC16,FC=-1.12,p=9.49e-11 UPF3A,FC=-6.63,p=1.8e-131 UPF3A,FC=-7.78,p=9.11e-170 UPF3A,FC=3.49,p=8.17e-96 UPF3A,FC=0.98,p=1.94e-29


        HG_U133_Plus2 (GSE3141, GSE10245, GSE10445, GSE12667, GSE10799, GSE16538, GSE7307, GSE3526)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      IRS2,FC=-0.54,p=0.000350183 IRS2,FC=-0.45,p=0.069240848 IRS2,FC=-0.11,p=0.419987951 COL4A1,FC=-0.24,p=0.017928235 COL4A1,FC=0.03,p=0.825678057 COL4A2,FC=-0.57,p=1.63e-06 COL4A2,FC=-0.02,p=0.915011483 RAB20,FC=0.08,p=0.659180238 RAB20,FC=-0.13,p=0.119201247 CARKD,FC=0.17,p=0.025231954 CARS2,FC=0.14,p=0.18282745 CARS2,FC=-0.28,p=0.084077589 CARS2,FC=0.15,p=0.112879373 ING1,FC=0.40,p=1.38e-06 ING1,FC=-0.04,p=0.701198671 ING1,FC=0.02,p=0.911917626 ANKRD10,FC=0.64,p=1.34e-05 ANKRD10,FC=0.19,p=0.045289828 ANKRD10,FC=0.15,p=0.453871434 ANKRD10,FC=0.25,p=0.030453614 ANKRD10,FC=0.57,p=0.001658832 ARHGEF7,FC=-0.32,p=0.002451796 ARHGEF7,FC=-0.24,p=0.000363344 ARHGEF7,FC=0.09,p=0.561729762 ARHGEF7,FC=0.17,p=0.037139255 ARHGEF7,FC=-0.05,p=0.767983266 ARHGEF7,FC=-0.34,p=0.132244547 ARHGEF7,FC=-0.02,p=0.901626029 ARHGEF7,FC=-0.27,p=0.068780107 ARHGEF7,FC=0.23,p=0.001639891 C13orf16,FC=0.12,p=0.485987519 SOX1,FC=0.05,p=0.823912403 SOX1,FC=-0.26,p=0.026052304 C13orf28,FC=0.02,p=0.893546081 TUBGCP3,FC=0.58,p=4.11e-07 TUBGCP3,FC=0.19,p=0.205896943 TUBGCP3,FC=-0.59,p=6.04e-08 ATP11A,FC=-0.10,p=0.649464036 ATP11A,FC=0.21,p=0.340444221 ATP11A,FC=0.71,p=0.001568405 ATP11A,FC=0.56,p=1.97e-05 ATP11A,FC=-0.26,p=0.071986715 MCF2L,FC=0.52,p=0.003210689 MCF2L,FC=0.22,p=0.223111831 MCF2L,FC=-0.29,p=0.030586302 MCF2L,FC=1.18,p=1.6e-05 F7,FC=0.16,p=0.383177048 F7,FC=0.35,p=0.000935723 F10,FC=-1.54,p=3.43e-20 PROZ,FC=0.29,p=0.065537406 PCID2,FC=0.01,p=0.897963325 PCID2,FC=0.12,p=0.050434397 CUL4A,FC=-0.93,p=9.73e-07 CUL4A,FC=0.10,p=0.176671672 CUL4A,FC=0.32,p=0.077863823 CUL4A,FC=0.03,p=0.732396768 CUL4A,FC=-0.26,p=0.007261232 LAMP1,FC=-0.03,p=0.856094871 LAMP1,FC=-0.09,p=0.25710939 LAMP1,FC=-0.77,p=1.01e-07 LAMP1,FC=-0.16,p=0.027995075 GRTP1,FC=0.75,p=0.000228919 GRTP1,FC=1.09,p=1.78e-13 ADPRHL1,FC=1.24,p=1.16e-10 ADPRHL1,FC=0.75,p=1.53e-07 DCUN1D2,FC=0.18,p=0.082017819 DCUN1D2,FC=-0.34,p=8.1e-05 TMCO3,FC=0.67,p=1.35e-05 TMCO3,FC=0.60,p=3.1e-10 TMCO3,FC=0.45,p=0.005720146 TFDP1,FC=0.36,p=6.92e-06 TFDP1,FC=0.02,p=0.821967462 TFDP1,FC=0.41,p=0.01055049 TFDP1,FC=-0.09,p=0.664194178 ATP4B,FC=0.50,p=0.006977136 ATP4B,FC=0.35,p=0.000212693 ATP4B,FC=0.10,p=0.32375645 FLJ44054,FC=0.77,p=9.04e-06 GAS6,FC=-1.43,p=1.57e-17 GAS6,FC=-1.05,p=1.18e-14 FAM70B,FC=-1.11,p=1.21e-10 NNMT,FC=-1.04,p=0.000129983 RASA3,FC=0.12,p=0.545131218 RASA3,FC=-0.31,p=0.043939836 RASA3,FC=-0.94,p=1.04e-10 CDC16,FC=-0.36,p=6.53e-08 CDC16,FC=-0.31,p=1.5e-05 CDC16,FC=-0.02,p=0.77931227 UPF3A,FC=-0.11,p=0.100547539 UPF3A,FC=-0.19,p=0.008929372 UPF3A,FC=-0.83,p=2.17e-06 UPF3A,FC=-0.24,p=0.006654526 ZNF828,FC=-0.17,p=0.0176483

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      IRS2,FC=-0.92,p=3.21e-08 IRS2,FC=-1.11,p=9.35e-07 IRS2,FC=-0.21,p=0.117928338 COL4A1,FC=-0.17,p=0.116137611 COL4A1,FC=0.08,p=0.680389756 COL4A2,FC=-0.21,p=0.064071167 COL4A2,FC=0.45,p=0.014184632 RAB20,FC=0.28,p=0.197185449 RAB20,FC=-1.00,p=4.41e-11 CARKD,FC=0.24,p=0.003520281 CARS2,FC=0.34,p=0.004692038 CARS2,FC=-0.07,p=0.655891935 CARS2,FC=0.38,p=0.00027809 ING1,FC=0.55,p=6.74e-10 ING1,FC=-0.32,p=0.008415452 ING1,FC=-0.65,p=0.01013865 ANKRD10,FC=0.24,p=0.157933816 ANKRD10,FC=-0.15,p=0.063490199 ANKRD10,FC=-0.22,p=0.139668074 ANKRD10,FC=-0.04,p=0.688495113 ANKRD10,FC=-0.07,p=0.693498247 ARHGEF7,FC=-0.31,p=0.000406319 ARHGEF7,FC=-0.33,p=5.71e-06 ARHGEF7,FC=0.39,p=0.01499442 ARHGEF7,FC=0.06,p=0.429966589 ARHGEF7,FC=-0.25,p=0.173443906 ARHGEF7,FC=-0.83,p=0.000372736 ARHGEF7,FC=0.15,p=0.502879771 ARHGEF7,FC=0.16,p=0.272489638 ARHGEF7,FC=0.66,p=8.15e-15 C13orf16,FC=0.13,p=0.447536259 SOX1,FC=0.67,p=0.011039167 SOX1,FC=-0.47,p=0.003389257 C13orf28,FC=-0.08,p=0.635795479 TUBGCP3,FC=1.18,p=1.74e-12 TUBGCP3,FC=0.32,p=0.042739428 TUBGCP3,FC=-0.83,p=6.56e-11 ATP11A,FC=-1.81,p=3.63e-13 ATP11A,FC=-0.87,p=0.000105214 ATP11A,FC=-0.27,p=0.114223084 ATP11A,FC=-0.20,p=0.16763359 ATP11A,FC=-2.21,p=1.73e-38 MCF2L,FC=0.40,p=0.024152637 MCF2L,FC=0.77,p=0.000293018 MCF2L,FC=-0.54,p=0.000198944 MCF2L,FC=2.02,p=7.59e-10 F7,FC=0.12,p=0.546731 F7,FC=0.44,p=0.000132311 F10,FC=-1.61,p=1.12e-23 PROZ,FC=0.01,p=0.942749687 PCID2,FC=0.22,p=0.048258937 PCID2,FC=0.35,p=2.55e-05 CUL4A,FC=-1.29,p=5.71e-12 CUL4A,FC=0.38,p=0.000172314 CUL4A,FC=1.21,p=2.61e-08 CUL4A,FC=-0.11,p=0.276555376 CUL4A,FC=-0.12,p=0.172241026 LAMP1,FC=0.51,p=0.007035679 LAMP1,FC=0.05,p=0.646890271 LAMP1,FC=-0.54,p=0.000159504 LAMP1,FC=-0.02,p=0.774399432 GRTP1,FC=0.57,p=0.016125163 GRTP1,FC=1.36,p=6.82e-15 ADPRHL1,FC=1.57,p=1.3e-13 ADPRHL1,FC=0.70,p=4.64e-05 DCUN1D2,FC=0.29,p=0.006051196 DCUN1D2,FC=-0.17,p=0.146343686 TMCO3,FC=0.75,p=3.64e-05 TMCO3,FC=0.18,p=0.062427852 TMCO3,FC=0.21,p=0.147903304 TFDP1,FC=0.89,p=1.04e-14 TFDP1,FC=0.15,p=0.260970131 TFDP1,FC=1.37,p=7.24e-14 TFDP1,FC=-0.69,p=0.008693286 ATP4B,FC=0.21,p=0.317326582 ATP4B,FC=0.42,p=1.05e-05 ATP4B,FC=0.03,p=0.785072572 FLJ44054,FC=1.76,p=2.15e-17 GAS6,FC=-1.16,p=2.3e-13 GAS6,FC=-0.64,p=2.29e-06 FAM70B,FC=-1.00,p=1.24e-11 NNMT,FC=-1.60,p=5.03e-08 RASA3,FC=0.22,p=0.311914169 RASA3,FC=-0.20,p=0.265645891 RASA3,FC=-1.10,p=4.28e-11 CDC16,FC=-0.53,p=7.91e-12 CDC16,FC=-0.43,p=3.22e-08 CDC16,FC=0.02,p=0.787887773 UPF3A,FC=-0.26,p=0.000665177 UPF3A,FC=-0.26,p=0.004070782 UPF3A,FC=-1.23,p=3.88e-09 UPF3A,FC=-0.34,p=0.000116772 ZNF828,FC=-0.09,p=0.220287053


        Stanford (GSE3398)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      IRS2,FC=0.37,p=0.254897715 COL4A1,FC=-0.07,p=0.864688847 COL4A1,FC=-0.03,p=0.953958845 COL4A2,FC=0.20,p=0.575680683 ING1,FC=0.38,p=0.246829054 ING1,FC=0.02,p=0.970481733 ING1,FC=0.02,p=0.970481733 ING1,FC=-0.51,p=0.227893007 ATP11A,FC=-0.25,p=0.628595664 MCF2L,FC=0.10,p=0.692468124 F10,FC=-0.34,p=0.268931077 PROZ,FC=0.41,p=0.341860082 CUL4A,FC=0.49,p=0.057869015 LAMP1,FC=-0.03,p=0.914639927 LAMP1,FC=0.35,p=0.567468835 TFDP1,FC=0.05,p=0.89710438 TFDP1,FC=0.64,p=0.043559548 TFDP1,FC=0.82,p=0.00590653 GAS6,FC=-0.97,p=0.016310908 CDC16,FC=0.11,p=0.589024046 UPF3A,FC=0.21,p=0.426199007

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      IRS2,FC=0.85,p=0.081057022 COL4A1,FC=-0.16,p=0.719867265 COL4A1,FC=-0.31,p=0.53407662 COL4A2,FC=-0.15,p=0.728051695 ING1,FC=0.68,p=0.062470108 ING1,FC=-0.21,p=0.597418469 ING1,FC=-0.21,p=0.597418469 ING1,FC=-0.74,p=0.046333124 ATP11A,FC=-2.55,p=1.32e-07 MCF2L,FC=0.50,p=0.058514369 F10,FC=-0.86,p=0.322143268 PROZ,FC=0.90,p=0.017359279 CUL4A,FC=0.47,p=0.302563948 LAMP1,FC=-0.22,p=0.596213172 LAMP1,FC=-1.59,p=0.006872806 TFDP1,FC=0.98,p=0.023352601 TFDP1,FC=1.21,p=0.024234793 TFDP1,FC=1.18,p=0.002014678 GAS6,FC=-1.25,p=0.008176419 CDC16,FC=-0.22,p=0.450032463 UPF3A,FC=-0.01,p=0.984596681


        Agilent_HS_21.6K (GSE11969)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      IRS2,FC=0.08,p=0.114422075 COL4A1,FC=-0.00,p=0.936239095 COL4A2,FC=-0.07,p=0.365246997 RAB20,FC=-0.18,p=0.0020153 ING1,FC=0.19,p=0.014982784 ANKRD10,FC=0.08,p=0.054141173 ARHGEF7,FC=-0.04,p=0.41821328 ARHGEF7,FC=0.07,p=0.034148396 SOX1,FC=-0.13,p=0.120469481 TUBGCP3,FC=0.04,p=0.243062025 ATP11A,FC=-0.11,p=0.072012214 ATP11A,FC=0.01,p=0.485901418 MCF2L,FC=-0.02,p=0.382362599 MCF2L,FC=-0.17,p=0.017460327 MCF2L,FC=0.01,p=0.814557591 F10,FC=-0.41,p=2.28e-14 PROZ,FC=0.06,p=0.270274226 CUL4A,FC=0.02,p=0.567697108 LAMP1,FC=-0.20,p=0.01562162 GRTP1,FC=0.01,p=0.291200769 ADPRHL1,FC=0.02,p=0.231146867 ADPRHL1,FC=0.07,p=0.262421644 TFDP1,FC=0.05,p=0.041695407 ATP4B,FC=0.03,p=0.207493164 GAS6,FC=-0.46,p=1.94e-08 RASA3,FC=0.07,p=0.215892084 CDC16,FC=-0.17,p=0.008014418 UPF3A,FC=0.04,p=0.338848183

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      IRS2,FC=0.09,p=0.053531136 COL4A1,FC=-0.00,p=0.970143799 COL4A2,FC=-0.07,p=0.2935475 RAB20,FC=-0.31,p=1.91e-08 ING1,FC=0.18,p=0.022118859 ANKRD10,FC=-0.01,p=0.887068782 ARHGEF7,FC=-0.11,p=0.101635828 ARHGEF7,FC=0.09,p=0.014990387 SOX1,FC=-0.17,p=0.068987983 TUBGCP3,FC=0.06,p=0.113458538 ATP11A,FC=-0.14,p=0.05021166 ATP11A,FC=0.01,p=0.482883025 MCF2L,FC=-0.03,p=0.362323576 MCF2L,FC=-0.23,p=0.005740742 MCF2L,FC=-0.03,p=0.346123298 F10,FC=-0.46,p=1.17e-12 PROZ,FC=0.06,p=0.263138958 CUL4A,FC=0.00,p=0.92282927 LAMP1,FC=-0.29,p=0.003126296 GRTP1,FC=0.04,p=0.030474882 ADPRHL1,FC=0.02,p=0.441559941 ADPRHL1,FC=0.06,p=0.354557788 TFDP1,FC=0.09,p=0.001266608 ATP4B,FC=0.02,p=0.304603933 GAS6,FC=-0.51,p=6.17e-14 RASA3,FC=0.08,p=0.085065851 CDC16,FC=-0.19,p=0.006878292 UPF3A,FC=-0.02,p=0.724439082


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    Copy Number Alteration Data        (help)
            ( red: amplification / green : deletion)

         Adenocarcinoma          Squamous Cell Carcinoma
        Meyerson Adenocarcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE17958 Squamous Cell Carcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE12280_SGOL (SCC / aCGH)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

      

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    miRNA Expression Data        (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        GSE15201
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        GSE18692
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

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    Paired (U133A/aCGH) AD Sample Data        (help) (PubMed)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

IRS2,FC=-0.34,p=0.008254932 IRS2,FC=-0.29,p=0.008582878 COL4A1,FC=0.05,p=0.693984697 COL4A1,FC=-0.17,p=0.049830429 COL4A2,FC=-0.54,p=1.03e-08 COL4A2,FC=-0.02,p=0.849688102 RAB20,FC=-0.19,p=0.001009267 CARKD,FC=0.06,p=0.411440899 CARS2,FC=0.03,p=0.593342105 ING1,FC=1.21,p=1.62e-09 ING1,FC=0.01,p=0.886360788 ING1,FC=-0.12,p=0.176199735 ANKRD10,FC=-0.05,p=0.570159308 ARHGEF7,FC=-0.04,p=0.35824788 ARHGEF7,FC=-0.64,p=2.15e-25 SOX1,FC=-0.17,p=0.009938689 TUBGCP3,FC=0.85,p=1.49e-12 TUBGCP3,FC=0.28,p=0.002815353 ATP11A,FC=2.10,p=4.21e-32 ATP11A,FC=0.38,p=0.002024046 MCF2L,FC=0.04,p=0.775484051 F7,FC=-0.56,p=1.78e-09 F10,FC=-0.70,p=6.82e-10 PROZ,FC=-0.92,p=8.26e-13 PCID2,FC=-0.13,p=0.024737771 CUL4A,FC=0.06,p=0.4170444 CUL4A,FC=0.10,p=0.126816415 LAMP1,FC=-0.20,p=5.8e-05 LAMP1,FC=-0.20,p=0.00216714 LAMP1,FC=1.50,p=1.52e-25 LAMP1,FC=0.80,p=9.8e-11 GRTP1,FC=-0.88,p=4.62e-07 DCUN1D2,FC=-0.32,p=5.07e-05 TMCO3,FC=0.68,p=2.02e-05 TMCO3,FC=0.58,p=2.33e-05 TFDP1,FC=0.33,p=6.43e-06 TFDP1,FC=0.46,p=2.79e-07 ATP4B,FC=-0.41,p=0.002149145 GAS6,FC=-1.38,p=7.9e-24 GAS6,FC=-1.19,p=4.52e-42 RASA3,FC=0.31,p=0.041824983 RASA3,FC=0.12,p=0.383154663 CDC16,FC=-0.31,p=3.7e-06 CDC16,FC=-0.24,p=6.47e-05 CDC16,FC=-0.18,p=0.00231005 UPF3A,FC=-0.12,p=0.097653038 UPF3A,FC=-0.02,p=0.787961554 UPF3A,FC=0.62,p=1.46e-05 UPF3A,FC=0.08,p=0.255624632

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    Array CGH Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

RP11-40E6, 3/50, 0.06 RP11-40E6, 2/50, 0.04 RP11-17E4, 10/50, 0.2 RP11-17E4, 5/50, 0.1 RP11-310D8, 9/50, 0.18 RP11-310D8, 15/50, 0.3 RP11-480K16, 4/50, 0.08 RP11-480K16, 10/50, 0.2 RP11-265C7, 13/50, 0.26 RP11-265C7, 4/50, 0.08 RP11-245B11, 13/50, 0.26 RP11-245B11, 7/50, 0.14

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    CGH Minimal Deletion Region Data        (help)      Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

PMID=16322280

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    LOH Frequency Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.

Our unpublished data D13S285, 12/38, 32% PMID=10987304 D13S285, 8/19, 42%

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