IGDB.NSCLC Chromosome View

Chromosome 17
17p13 17p12 17p11 17q11 17q12 17q21 17q22 17q23 17q24 17q25         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Move   
-
        
   Zoom

    Lung Cancer Genes with Experimental Evidence         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: up-regulation / green : down-regulation / gray : mutation)

TOP3A, up, 13/50(26%,0.62))(Fold Change) MAPK7, 0.50%, 1/202

(Click the gene to hyperlink to gene view.)    

    Gene Expression Microarray Data         (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        HG_U95 (Meyerson, GSE2514)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      PIGL,FC=0.27,p=0.047995044 CCDC144A,FC=0.32,p=0.30557376 TNFRSF13B,FC=0.48,p=6.39e-07 MPRIP,FC=-0.18,p=0.014408372 COPS3,FC=-0.06,p=0.560325663 PEMT,FC=0.17,p=0.347431463 SREBF1,FC=0.36,p=3.99e-05 TOM1L2,FC=-0.49,p=0.000372181 LRRC48,FC=0.35,p=0.028828551 LRRC48,FC=-1.50,p=2.01e-07 LRRC48,FC=-0.57,p=0.00135322 ATPAF2,FC=-0.03,p=0.827194956 ATPAF2,FC=0.92,p=4.22e-06 DRG2,FC=0.26,p=0.000784431 LLGL1,FC=0.17,p=0.069823369 LLGL1,FC=0.50,p=0.002163384 FLII,FC=-0.05,p=0.530303562 TOP3A,FC=0.69,p=0.00123179 TOP3A,FC=0.31,p=0.003007841 SHMT1,FC=0.32,p=0.004155687 SHMT1,FC=-0.07,p=0.711377985 PRPSAP2,FC=-0.03,p=0.77917059 GRAP,FC=0.10,p=0.295127111 GRAP,FC=-0.22,p=0.157061297 EPN2,FC=-0.59,p=9.37e-06 B9D1,FC=0.32,p=0.000954588 MAPK7,FC=-0.38,p=0.000971258 MFAP4,FC=-3.38,p=5.22e-26 ALDH3A2,FC=-0.42,p=0.018949328 ALDH3A1,FC=0.43,p=0.099677614 ULK2,FC=-0.64,p=2.45e-06 ULK2,FC=0.47,p=0.00100804 AKAP10,FC=-0.05,p=0.592244387 AKAP10,FC=-0.31,p=0.10555358 USP22,FC=0.06,p=0.343546458 TMEM11,FC=-0.21,p=0.002117347 MAP2K3,FC=-0.08,p=0.302157718 MAP2K3,FC=-0.45,p=0.001717806 KCNJ12,FC=0.12,p=0.426407148

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      PIGL,FC=0.03,p=0.89492338 CCDC144A,FC=1.05,p=0.017107617 TNFRSF13B,FC=0.43,p=0.002360316 MPRIP,FC=-0.57,p=2.34e-10 COPS3,FC=0.42,p=0.001498528 PEMT,FC=0.61,p=0.002341302 SREBF1,FC=0.62,p=1.68e-07 TOM1L2,FC=-0.55,p=1.7e-05 LRRC48,FC=0.56,p=0.010671751 LRRC48,FC=-1.53,p=0.000190651 LRRC48,FC=-0.89,p=0.000388286 ATPAF2,FC=0.03,p=0.892958435 ATPAF2,FC=0.84,p=0.008395659 DRG2,FC=0.36,p=6.74e-05 LLGL1,FC=0.10,p=0.448516444 LLGL1,FC=0.45,p=0.060914818 FLII,FC=-0.31,p=0.005876671 TOP3A,FC=0.38,p=0.176185881 TOP3A,FC=0.31,p=0.013142643 SHMT1,FC=0.46,p=0.000367371 SHMT1,FC=-0.07,p=0.792494212 PRPSAP2,FC=0.31,p=0.04134906 GRAP,FC=-0.15,p=0.196892845 GRAP,FC=-0.41,p=0.050519385 EPN2,FC=-0.40,p=0.002832822 B9D1,FC=0.51,p=0.000267241 MAPK7,FC=-0.18,p=0.135559618 MFAP4,FC=-3.92,p=2.63e-23 ALDH3A2,FC=-0.59,p=0.00161649 ALDH3A1,FC=2.66,p=4.9e-09 ULK2,FC=-0.70,p=2.79e-05 ULK2,FC=0.39,p=0.084380816 AKAP10,FC=0.05,p=0.790112139 AKAP10,FC=-1.04,p=0.000953186 USP22,FC=-0.02,p=0.785080841 TMEM11,FC=-0.15,p=0.092558519 MAP2K3,FC=-0.52,p=2.01e-05 MAP2K3,FC=-0.52,p=0.000364652 KCNJ12,FC=0.53,p=0.006313978


        HG_U133A (GSE7670, GSE17475, DCLungStudy, GSE4573, GSE10072)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      NCOR1,FC=-0.20,p=0.000114956 NCOR1,FC=-0.03,p=0.570666976 PIGL,FC=0.41,p=6.6e-07 PIGL,FC=0.10,p=0.048251159 UBB,FC=-0.39,p=3.8e-22 TRPV2,FC=-1.19,p=1.36e-62 ZNF287,FC=-0.11,p=0.52988971 ZNF287,FC=-0.46,p=0.004190548 CCDC144A,FC=-0.39,p=0.009070086 TNFRSF13B,FC=0.11,p=0.231773853 FLCN,FC=0.17,p=0.108778657 COPS3,FC=0.21,p=0.000169216 NT5M,FC=0.26,p=0.042581218 MED9,FC=0.06,p=0.227536809 PEMT,FC=0.28,p=0.007361139 PEMT,FC=-0.37,p=0.000306907 RAI1,FC=0.08,p=0.527522997 SREBF1,FC=-0.09,p=0.227311702 TOM1L2,FC=-0.52,p=3.96e-06 LRRC48,FC=-0.32,p=4.29e-05 ATPAF2,FC=0.62,p=6.72e-07 C17orf39,FC=0.64,p=3.55e-06 DRG2,FC=0.14,p=0.054250603 DRG2,FC=0.06,p=0.291537102 MYO15A,FC=-0.29,p=3.24e-08 LLGL1,FC=-0.04,p=0.71909507 LLGL1,FC=0.18,p=0.129449966 FLII,FC=0.02,p=0.734997422 FLII,FC=0.26,p=7.61e-07 FLII,FC=0.11,p=0.038736701 TOP3A,FC=-0.03,p=0.692896371 TOP3A,FC=0.06,p=0.642327859 SHMT1,FC=-0.00,p=0.977933297 SHMT1,FC=1.02,p=5.4e-10 PRPSAP2,FC=0.37,p=1.09e-08 GRAP,FC=0.83,p=2.12e-08 EPN2,FC=-0.54,p=9.29e-16 EPN2,FC=0.10,p=0.409779529 B9D1,FC=0.19,p=0.094287823 B9D1,FC=-0.02,p=0.878182451 B9D1,FC=0.12,p=0.075601254 MAPK7,FC=-0.15,p=0.004108231 MAPK7,FC=-0.26,p=0.002455187 MFAP4,FC=-3.07,p=3.63e-44 ALDH3A2,FC=0.28,p=0.008004969 ALDH3A2,FC=-0.43,p=9.31e-05 ALDH3A2,FC=0.29,p=0.005640506 ALDH3A1,FC=0.95,p=0.000348214 ULK2,FC=-0.75,p=1.69e-31 ULK2,FC=-0.61,p=2.37e-17 AKAP10,FC=0.54,p=3.11e-08 AKAP10,FC=-0.18,p=0.00138312 USP22,FC=-0.22,p=3.93e-06 USP22,FC=0.58,p=1.44e-11 DHRS7B,FC=-0.08,p=0.35240645 TMEM11,FC=0.19,p=0.001561696 MAP2K3,FC=-0.30,p=3.95e-05 MAP2K3,FC=-0.45,p=2.78e-08 MAP2K3,FC=-0.04,p=0.469325641 KCNJ12,FC=0.28,p=0.051736181 KCNJ12,FC=-0.48,p=0.006845314

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      NCOR1,FC=-2.10,p=3.63e-88 NCOR1,FC=1.10,p=4.13e-31 PIGL,FC=6.72,p=3.42e-163 PIGL,FC=0.32,p=2.32e-08 UBB,FC=-0.78,p=2.11e-51 TRPV2,FC=-2.37,p=6.12e-67 ZNF287,FC=0.51,p=0.000560574 ZNF287,FC=2.78,p=9.44e-54 CCDC144A,FC=5.66,p=8.52e-104 TNFRSF13B,FC=0.43,p=7.01e-07 FLCN,FC=-1.28,p=7.92e-20 COPS3,FC=-0.30,p=7.34e-06 NT5M,FC=2.92,p=3.32e-66 MED9,FC=1.98,p=2.88e-80 PEMT,FC=2.04,p=1.18e-35 PEMT,FC=0.78,p=3.47e-13 RAI1,FC=3.88,p=2.83e-87 SREBF1,FC=-1.56,p=4.87e-25 TOM1L2,FC=-1.31,p=5.23e-19 LRRC48,FC=-1.69,p=4.55e-32 ATPAF2,FC=3.93,p=1.74e-80 C17orf39,FC=2.08,p=9.89e-39 DRG2,FC=1.39,p=3.84e-50 DRG2,FC=0.32,p=4.65e-05 MYO15A,FC=-1.90,p=7.55e-47 LLGL1,FC=-1.39,p=3.55e-16 LLGL1,FC=3.52,p=3.49e-94 FLII,FC=-6.62,p=1.27e-180 FLII,FC=-2.81,p=3.89e-56 FLII,FC=0.41,p=1.14e-08 TOP3A,FC=-1.64,p=7.35e-33 TOP3A,FC=-0.53,p=0.000338761 SHMT1,FC=0.43,p=0.000107895 SHMT1,FC=3.48,p=5.9e-91 PRPSAP2,FC=1.65,p=2.02e-38 GRAP,FC=2.59,p=4.53e-40 EPN2,FC=1.35,p=3.72e-22 EPN2,FC=3.21,p=2.09e-101 B9D1,FC=-1.16,p=3.02e-21 B9D1,FC=-0.77,p=2.32e-07 B9D1,FC=-4.98,p=2.06e-149 MAPK7,FC=-2.26,p=9.69e-60 MAPK7,FC=-0.50,p=0.000256922 MFAP4,FC=-4.24,p=4.9e-120 ALDH3A2,FC=-0.50,p=1.52e-11 ALDH3A2,FC=-2.69,p=2.53e-97 ALDH3A2,FC=-3.53,p=9.21e-69 ALDH3A1,FC=1.45,p=1.23e-13 ULK2,FC=0.36,p=0.001697576 ULK2,FC=-0.01,p=0.929353042 AKAP10,FC=1.76,p=9.41e-43 AKAP10,FC=1.26,p=5.79e-50 USP22,FC=-1.08,p=3.73e-53 USP22,FC=4.13,p=3.63e-56 DHRS7B,FC=-1.12,p=2e-31 TMEM11,FC=-0.28,p=2.52e-07 MAP2K3,FC=-4.01,p=2.51e-91 MAP2K3,FC=-5.01,p=7.25e-91 MAP2K3,FC=0.84,p=3.56e-26 KCNJ12,FC=1.67,p=4.79e-23 KCNJ12,FC=0.94,p=5.79e-08


        HG_U133_Plus2 (GSE3141, GSE10245, GSE10445, GSE12667, GSE10799, GSE16538, GSE7307, GSE3526)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      NCOR1,FC=-0.06,p=0.269110219 NCOR1,FC=0.35,p=0.134837012 NCOR1,FC=0.00,p=0.946597353 NCOR1,FC=-0.55,p=0.002043833 PIGL,FC=0.61,p=6.89e-10 PIGL,FC=0.50,p=4.91e-09 CENPV,FC=0.14,p=0.331110487 CENPV,FC=-0.21,p=0.296561762 UBB,FC=-0.25,p=9.75e-10 TRPV2,FC=-0.30,p=0.068386542 TRPV2,FC=-1.37,p=4.9e-33 C17orf76,FC=-0.99,p=3.23e-05 ZNF287,FC=-0.57,p=0.004328245 ZNF287,FC=0.39,p=0.037975112 ZNF624,FC=-0.00,p=0.983764109 CCDC144A,FC=0.11,p=0.553001377 TNFRSF13B,FC=0.05,p=0.692530919 MPRIP,FC=0.32,p=0.026789145 MPRIP,FC=0.10,p=0.428624847 MPRIP,FC=-0.61,p=0.000136159 MPRIP,FC=0.39,p=8.08e-05 MPRIP,FC=-0.43,p=0.000602695 MPRIP,FC=-1.51,p=8.95e-12 PLD6,FC=0.62,p=1.25e-10 FLCN,FC=0.13,p=0.30087922 FLCN,FC=-0.28,p=0.119816623 FLCN,FC=0.10,p=0.503668993 FLCN,FC=0.48,p=7.27e-05 FLCN,FC=0.05,p=0.503907118 COPS3,FC=-0.25,p=0.004829104 NT5M,FC=-0.15,p=0.43114686 MED9,FC=0.32,p=1.19e-05 RASD1,FC=0.89,p=2.41e-05 PEMT,FC=0.16,p=0.315928159 PEMT,FC=0.11,p=0.220826066 RAI1,FC=0.27,p=0.000739699 RAI1,FC=0.31,p=0.01653486 RAI1,FC=0.05,p=0.754582013 SREBF1,FC=0.24,p=0.034218433 SREBF1,FC=0.54,p=0.003233731 TOM1L2,FC=0.39,p=0.001607514 TOM1L2,FC=-0.60,p=7.3e-09 TOM1L2,FC=-0.03,p=0.871860294 LRRC48,FC=-0.78,p=1.5e-09 LRRC48,FC=0.00,p=0.996819839 ATPAF2,FC=-0.03,p=0.795423582 C17orf39,FC=-0.21,p=0.004246288 C17orf39,FC=-0.06,p=0.777448203 C17orf39,FC=0.53,p=0.0055242 DRG2,FC=0.12,p=0.345430438 DRG2,FC=0.15,p=0.064986946 MYO15A,FC=0.37,p=0.005784882 ALKBH5,FC=0.15,p=0.03408197 ALKBH5,FC=0.43,p=0.000213027 ALKBH5,FC=0.12,p=0.335631533 LLGL1,FC=0.62,p=1.51e-07 LLGL1,FC=0.56,p=0.001722637 LLGL1,FC=0.80,p=3.14e-06 FLII,FC=-0.09,p=0.609207651 FLII,FC=-0.25,p=0.018079888 FLII,FC=-0.44,p=4.38e-08 FLII,FC=-0.15,p=0.032537134 SMCR7,FC=-0.27,p=0.003391724 TOP3A,FC=0.78,p=1.31e-05 TOP3A,FC=0.31,p=0.000144915 SMCR8,FC=0.49,p=0.019637631 SMCR8,FC=-0.41,p=1.03e-06 SMCR8,FC=-0.28,p=3.97e-05 SMCR8,FC=0.11,p=0.213511961 SMCR8,FC=-0.00,p=0.97349802 SMCR8,FC=0.54,p=0.001107226 SHMT1,FC=-0.18,p=0.461135753 SHMT1,FC=0.15,p=0.289931801 SHMT1,FC=0.42,p=8.72e-05 LOC339240,FC=0.56,p=0.005905798 TBC1D28,FC=0.24,p=0.187505435 TRIM16L,FC=0.38,p=0.000100186 PRPSAP2,FC=-0.03,p=0.705882371 SLC5A10,FC=0.92,p=1.35e-07 GRAP,FC=-0.89,p=8.65e-08 GRAP,FC=0.14,p=0.413179915 EPN2,FC=-0.26,p=0.119512071 EPN2,FC=-0.45,p=5.61e-07 B9D1,FC=-0.14,p=0.358927077 B9D1,FC=0.09,p=0.415200968 B9D1,FC=0.06,p=0.75343038 MAPK7,FC=-0.80,p=4.98e-08 MAPK7,FC=-0.29,p=0.000356075 MFAP4,FC=-3.78,p=2.06e-31 RNF112,FC=-0.91,p=1.17e-08 ALDH3A2,FC=0.62,p=4.8e-06 ALDH3A2,FC=-0.09,p=0.536121012 ALDH3A2,FC=-0.23,p=0.058680526 SLC47A2,FC=0.91,p=2.15e-06 ALDH3A1,FC=-0.55,p=0.081478098 ULK2,FC=-0.32,p=0.005322313 ULK2,FC=-0.54,p=2.21e-08 ULK2,FC=-0.66,p=2.55e-15 AKAP10,FC=-0.11,p=0.199398147 AKAP10,FC=0.21,p=0.190590407 AKAP10,FC=-0.29,p=0.007569642 AKAP10,FC=-0.50,p=0.021264926 CYTSB,FC=-0.30,p=0.019566596 CYTSB,FC=-0.09,p=0.258514836 CYTSB,FC=-0.52,p=2.4e-05 CCDC144C,FC=0.40,p=0.055123651 USP22,FC=0.21,p=0.000851052 USP22,FC=0.52,p=0.004840719 DHRS7B,FC=-0.34,p=0.005832378 DHRS7B,FC=0.12,p=0.489773524 TMEM11,FC=0.17,p=0.077511119 C17orf103,FC=-0.76,p=7.62e-15 C17orf103,FC=-0.01,p=0.953846933 MAP2K3,FC=-0.41,p=2.06e-05 MAP2K3,FC=-0.12,p=0.194789546 MAP2K3,FC=-0.31,p=0.020779523 KCNJ12,FC=-0.62,p=7.87e-05 KCNJ12,FC=-0.54,p=0.013052529 KCNJ12,FC=-0.86,p=4.22e-05 KLHL9,FC=-0.16,p=0.436190642 C17orf51,FC=-0.77,p=2.55e-05 C17orf51,FC=-0.36,p=0.034872956 C17orf51,FC=-0.27,p=0.148391019

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      NCOR1,FC=-0.13,p=0.084687029 NCOR1,FC=-0.38,p=0.142057719 NCOR1,FC=0.11,p=0.118285746 NCOR1,FC=-1.29,p=6.5e-12 PIGL,FC=0.60,p=1.62e-09 PIGL,FC=0.55,p=2.62e-08 CENPV,FC=0.47,p=0.001994307 CENPV,FC=-0.17,p=0.465105634 UBB,FC=-0.54,p=9.01e-15 TRPV2,FC=-0.42,p=0.026827012 TRPV2,FC=-1.77,p=4.34e-29 C17orf76,FC=-2.28,p=4.89e-20 ZNF287,FC=-1.13,p=3.11e-06 ZNF287,FC=0.71,p=0.001619364 ZNF624,FC=-0.01,p=0.918510173 CCDC144A,FC=-0.57,p=0.015002437 TNFRSF13B,FC=0.39,p=0.001499721 MPRIP,FC=-0.02,p=0.908502054 MPRIP,FC=0.49,p=0.000145829 MPRIP,FC=-1.24,p=4.2e-10 MPRIP,FC=0.26,p=0.045876859 MPRIP,FC=-0.58,p=7.66e-05 MPRIP,FC=-2.88,p=5.43e-26 PLD6,FC=1.12,p=5.63e-17 FLCN,FC=0.16,p=0.170580174 FLCN,FC=-0.28,p=0.211833066 FLCN,FC=0.28,p=0.124168415 FLCN,FC=0.80,p=5.61e-10 FLCN,FC=0.01,p=0.933956512 COPS3,FC=-0.07,p=0.458735559 NT5M,FC=-0.27,p=0.231738522 MED9,FC=0.44,p=2.48e-08 RASD1,FC=-0.67,p=0.000290527 PEMT,FC=0.33,p=0.081042612 PEMT,FC=0.14,p=0.176341815 RAI1,FC=0.31,p=0.000273139 RAI1,FC=0.94,p=1.8e-09 RAI1,FC=0.01,p=0.957278826 SREBF1,FC=0.84,p=6.28e-09 SREBF1,FC=0.94,p=0.00016944 TOM1L2,FC=0.33,p=0.024587524 TOM1L2,FC=-0.21,p=0.099117596 TOM1L2,FC=0.44,p=0.018642332 LRRC48,FC=-1.14,p=3.7e-12 LRRC48,FC=0.48,p=0.022382777 ATPAF2,FC=-0.12,p=0.29270767 C17orf39,FC=0.13,p=0.145414798 C17orf39,FC=-0.63,p=0.005457869 C17orf39,FC=0.46,p=0.040314762 DRG2,FC=0.32,p=0.013829103 DRG2,FC=0.40,p=1.11e-05 MYO15A,FC=0.85,p=4.68e-07 ALKBH5,FC=0.55,p=5.34e-08 ALKBH5,FC=1.07,p=8.78e-14 ALKBH5,FC=0.28,p=0.007861386 LLGL1,FC=0.71,p=1.22e-05 LLGL1,FC=0.73,p=0.000238945 LLGL1,FC=1.34,p=1.92e-10 FLII,FC=-0.37,p=0.087237218 FLII,FC=-0.23,p=0.015103216 FLII,FC=-0.58,p=2.09e-12 FLII,FC=-0.29,p=0.000998532 SMCR7,FC=-0.61,p=5.5e-06 TOP3A,FC=0.75,p=0.000462344 TOP3A,FC=0.85,p=3.33e-12 SMCR8,FC=0.97,p=2.96e-05 SMCR8,FC=-0.59,p=9.73e-10 SMCR8,FC=-0.47,p=1.29e-08 SMCR8,FC=0.41,p=7.26e-05 SMCR8,FC=0.57,p=0.00195559 SMCR8,FC=1.07,p=6.2e-08 SHMT1,FC=-0.78,p=0.003898177 SHMT1,FC=0.42,p=0.008321647 SHMT1,FC=0.58,p=5e-08 LOC339240,FC=2.42,p=1.9e-16 TBC1D28,FC=0.10,p=0.609715302 TRIM16L,FC=0.81,p=2e-10 PRPSAP2,FC=0.26,p=0.007990765 SLC5A10,FC=0.74,p=0.000110334 GRAP,FC=-1.65,p=2.82e-15 GRAP,FC=0.26,p=0.203274672 EPN2,FC=-0.60,p=0.002401108 EPN2,FC=0.04,p=0.708204995 B9D1,FC=-0.20,p=0.215547116 B9D1,FC=-0.09,p=0.475124048 B9D1,FC=-0.60,p=0.004383607 MAPK7,FC=-0.76,p=2.14e-06 MAPK7,FC=-0.02,p=0.777622414 MFAP4,FC=-4.40,p=7.57e-30 RNF112,FC=-0.79,p=5.15e-06 ALDH3A2,FC=0.54,p=2.6e-05 ALDH3A2,FC=0.12,p=0.362323746 ALDH3A2,FC=-0.33,p=0.00655368 SLC47A2,FC=2.15,p=4.91e-16 ALDH3A1,FC=2.48,p=2.22e-09 ULK2,FC=-0.32,p=0.010314214 ULK2,FC=-0.52,p=3.1e-05 ULK2,FC=-0.58,p=6.94e-11 AKAP10,FC=-0.26,p=0.022221653 AKAP10,FC=-0.18,p=0.275817685 AKAP10,FC=-0.63,p=3.66e-07 AKAP10,FC=-1.35,p=1.08e-06 CYTSB,FC=-0.62,p=2.09e-05 CYTSB,FC=-0.05,p=0.539494535 CYTSB,FC=-0.89,p=7.68e-09 CCDC144C,FC=0.52,p=0.027194678 USP22,FC=0.34,p=2.22e-05 USP22,FC=0.63,p=0.000874316 DHRS7B,FC=-1.09,p=7.04e-10 DHRS7B,FC=0.38,p=0.05102424 TMEM11,FC=0.16,p=0.154335375 C17orf103,FC=-0.65,p=3.42e-11 C17orf103,FC=0.28,p=0.009112524 MAP2K3,FC=-0.30,p=0.000291121 MAP2K3,FC=-0.01,p=0.93447252 MAP2K3,FC=0.07,p=0.606150894 KCNJ12,FC=-0.20,p=0.167076366 KCNJ12,FC=-0.47,p=0.049040418 KCNJ12,FC=-1.03,p=4.91e-06 KLHL9,FC=0.08,p=0.7122658 C17orf51,FC=-0.65,p=0.00112607 C17orf51,FC=-0.50,p=0.009063532 C17orf51,FC=-0.19,p=0.38345724


        Stanford (GSE3398)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      NCOR1,FC=0.39,p=0.196485396 NCOR1,FC=-0.22,p=0.384596656 NCOR1,FC=0.35,p=0.358038872 NCOR1,FC=0.64,p=0.044044164 NCOR1,FC=-0.51,p=0.024808764 NCOR1,FC=0.22,p=0.35638863 COPS3,FC=0.77,p=0.013312142 NT5M,FC=0.79,p=0.025206359 PEMT,FC=0.37,p=0.157821943 PEMT,FC=0.04,p=0.890488487 SREBF1,FC=-0.71,p=0.004537032 TOM1L2,FC=-0.84,p=0.002424325 DRG2,FC=0.21,p=0.25634478 LLGL1,FC=-0.22,p=0.552436751 FLII,FC=0.29,p=0.347323747 FLII,FC=0.27,p=0.28175574 TOP3A,FC=0.65,p=0.025350216 SHMT1,FC=0.60,p=0.031783396 MAPK7,FC=-0.29,p=0.329053436 MFAP4,FC=-1.33,p=0.03483535 ALDH3A2,FC=-0.57,p=0.181932618 AKAP10,FC=0.12,p=0.712382775 MAP2K3,FC=0.04,p=0.871392557

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      NCOR1,FC=0.79,p=0.016149735 NCOR1,FC=-0.20,p=0.489755603 NCOR1,FC=0.23,p=0.561416636 NCOR1,FC=0.70,p=0.201882756 NCOR1,FC=-0.88,p=0.081430933 NCOR1,FC=-0.17,p=0.597552001 COPS3,FC=0.68,p=0.034863299 NT5M,FC=0.81,p=0.136018256 PEMT,FC=0.08,p=0.778844547 PEMT,FC=-0.01,p=0.968668005 SREBF1,FC=-0.73,p=0.018023841 TOM1L2,FC=-1.22,p=0.00135612 DRG2,FC=-0.01,p=0.975991525 LLGL1,FC=0.03,p=0.922057979 FLII,FC=0.36,p=0.243935138 FLII,FC=-0.58,p=0.03390153 TOP3A,FC=0.57,p=0.052656099 SHMT1,FC=0.17,p=0.577019511 MAPK7,FC=-1.04,p=0.001034259 MFAP4,FC=-2.38,p=0.000287923 ALDH3A2,FC=-0.69,p=0.031120351 AKAP10,FC=0.84,p=0.19088001 MAP2K3,FC=-0.36,p=0.542446319


        Agilent_HS_21.6K (GSE11969)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      NCOR1,FC=-0.09,p=0.262170197 NCOR1,FC=0.11,p=0.083509628 PIGL,FC=0.24,p=5.89e-05 UBB,FC=-0.32,p=4.01e-06 TRPV2,FC=-0.58,p=8.91e-11 ZNF624,FC=-0.01,p=0.805509879 TNFRSF13B,FC=0.08,p=0.510436166 FLCN,FC=-0.03,p=0.752698385 FLCN,FC=0.04,p=0.267713445 FLCN,FC=0.07,p=0.023701113 COPS3,FC=0.01,p=0.803543369 NT5M,FC=0.01,p=0.736725725 PEMT,FC=-0.27,p=4.83e-10 PEMT,FC=-0.02,p=0.555230158 RAI1,FC=-0.02,p=0.500567996 SREBF1,FC=0.09,p=0.436581453 SREBF1,FC=0.08,p=0.416805242 TOM1L2,FC=-0.20,p=1.99e-06 TOM1L2,FC=0.01,p=0.789037303 TOM1L2,FC=0.17,p=0.349678847 ATPAF2,FC=0.00,p=0.939352215 C17orf39,FC=0.14,p=0.000736085 DRG2,FC=-0.06,p=0.225325237 MYO15A,FC=-0.06,p=0.254023354 LLGL1,FC=0.04,p=0.37305913 FLII,FC=-0.31,p=2.86e-06 SMCR7,FC=-0.03,p=0.148161663 TOP3A,FC=-0.01,p=0.729568856 SMCR8,FC=-0.08,p=0.138045753 PRPSAP2,FC=0.05,p=0.257297104 SLC5A10,FC=0.06,p=0.525281071 SLC5A10,FC=0.09,p=0.031014933 GRAP,FC=-0.23,p=1.42e-07 EPN2,FC=-0.24,p=0.000405123 MAPK7,FC=-0.05,p=0.175075877 MFAP4,FC=-0.59,p=3.74e-05 ALDH3A2,FC=-0.06,p=0.205100644 ALDH3A1,FC=0.03,p=0.819907038 ULK2,FC=-0.03,p=0.420709659 ULK2,FC=-0.03,p=0.52381825 AKAP10,FC=0.06,p=0.025655239 USP22,FC=-0.06,p=0.464203759 MAP2K3,FC=-0.05,p=0.099062941 KCNJ12,FC=0.03,p=0.38808077

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      NCOR1,FC=-0.13,p=0.130771678 NCOR1,FC=0.07,p=0.273475193 PIGL,FC=0.22,p=0.001222518 UBB,FC=-0.34,p=9.2e-07 TRPV2,FC=-0.70,p=1.12e-12 ZNF624,FC=-0.03,p=0.679178871 TNFRSF13B,FC=0.07,p=0.52195881 FLCN,FC=-0.06,p=0.489711267 FLCN,FC=0.08,p=0.062608588 FLCN,FC=0.05,p=0.256321497 COPS3,FC=0.15,p=0.011042218 NT5M,FC=0.02,p=0.565108334 PEMT,FC=-0.24,p=5.67e-07 PEMT,FC=-0.00,p=0.957066421 RAI1,FC=-0.00,p=0.834557138 SREBF1,FC=0.03,p=0.695521714 SREBF1,FC=0.17,p=0.042518953 TOM1L2,FC=-0.20,p=5.93e-05 TOM1L2,FC=-0.00,p=0.940359364 TOM1L2,FC=0.02,p=0.89862555 ATPAF2,FC=-0.01,p=0.730404029 C17orf39,FC=0.17,p=0.001083294 DRG2,FC=-0.03,p=0.520414479 MYO15A,FC=-0.08,p=0.281368493 LLGL1,FC=0.04,p=0.265763698 FLII,FC=-0.34,p=6.71e-05 SMCR7,FC=-0.06,p=0.003679058 TOP3A,FC=-0.01,p=0.894574591 SMCR8,FC=-0.10,p=0.057496815 PRPSAP2,FC=0.17,p=0.012756703 SLC5A10,FC=0.11,p=0.297439604 SLC5A10,FC=0.08,p=0.073830432 GRAP,FC=-0.26,p=5.73e-08 EPN2,FC=-0.26,p=6.54e-05 MAPK7,FC=-0.07,p=0.081811643 MFAP4,FC=-0.96,p=5.51e-09 ALDH3A2,FC=-0.07,p=0.212443836 ALDH3A1,FC=0.80,p=0.001356249 ULK2,FC=-0.08,p=0.033773461 ULK2,FC=-0.04,p=0.391430797 AKAP10,FC=0.03,p=0.172716971 USP22,FC=-0.07,p=0.36778279 MAP2K3,FC=-0.07,p=0.009628853 KCNJ12,FC=0.06,p=0.066033437


< Top >


    Copy Number Alteration Data        (help)
            ( red: amplification / green : deletion)

         Adenocarcinoma          Squamous Cell Carcinoma
        Meyerson Adenocarcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE17958 Squamous Cell Carcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE12280_SGOL (SCC / aCGH)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

      

< Top >


    miRNA Expression Data        (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        GSE15201
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        GSE18692
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-mir-33b,Mean=-0.03

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-mir-33b,Mean=0.04

< Top >


    Paired (U133A/aCGH) AD Sample Data        (help) (PubMed)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

NCOR1,FC=-0.19,p=0.000629918 NCOR1,FC=-0.13,p=0.01087301 PIGL,FC=0.18,p=0.040075957 PIGL,FC=-0.24,p=0.001611982 UBB,FC=-0.33,p=1.19e-21 TRPV2,FC=-1.35,p=1.37e-51 ZNF287,FC=-0.42,p=0.045536424 ZNF287,FC=-0.47,p=0.010545908 CCDC144A,FC=-0.34,p=0.066260012 TNFRSF13B,FC=0.16,p=0.04693099 FLCN,FC=0.44,p=3.86e-06 COPS3,FC=0.29,p=1.49e-06 NT5M,FC=0.23,p=0.108120061 MED9,FC=-0.19,p=0.000218218 PEMT,FC=0.26,p=0.026316719 PEMT,FC=-0.63,p=6.92e-09 RAI1,FC=-0.08,p=0.578977493 SREBF1,FC=-0.14,p=0.051572521 TOM1L2,FC=-1.32,p=5.54e-20 LRRC48,FC=-0.34,p=0.000487823 ATPAF2,FC=0.73,p=2.11e-07 C17orf39,FC=0.62,p=0.000138848 DRG2,FC=0.25,p=0.000178556 DRG2,FC=-0.02,p=0.75577693 MYO15A,FC=-0.59,p=8.81e-15 LLGL1,FC=-0.39,p=0.000180469 LLGL1,FC=0.53,p=0.000102822 FLII,FC=-0.02,p=0.687730468 FLII,FC=0.20,p=0.000101931 FLII,FC=0.24,p=1.38e-05 TOP3A,FC=-0.01,p=0.940099908 TOP3A,FC=0.31,p=0.053587934 SHMT1,FC=-0.19,p=0.07725732 SHMT1,FC=1.07,p=5.1e-08 PRPSAP2,FC=0.32,p=1.13e-06 GRAP,FC=1.02,p=5.09e-10 EPN2,FC=-0.65,p=1.76e-19 EPN2,FC=0.89,p=1.66e-06 B9D1,FC=0.11,p=0.425377249 B9D1,FC=0.05,p=0.755797606 B9D1,FC=-0.07,p=0.335039163 MAPK7,FC=-0.21,p=4.99e-05 MAPK7,FC=0.12,p=0.346878203 MFAP4,FC=-2.61,p=8.8e-25 ALDH3A2,FC=0.53,p=5.14e-07 ALDH3A2,FC=-0.25,p=0.022539045 ALDH3A2,FC=0.40,p=0.000202039 ALDH3A1,FC=1.44,p=1.06e-06 ULK2,FC=-0.87,p=2.33e-43 ULK2,FC=-0.57,p=7.52e-14 AKAP10,FC=0.78,p=1.42e-16 AKAP10,FC=-0.19,p=0.003851073 USP22,FC=-0.25,p=1.08e-08 USP22,FC=0.88,p=1.16e-16 DHRS7B,FC=0.01,p=0.937832175 TMEM11,FC=-0.08,p=0.171538348 MAP2K3,FC=-0.32,p=3.82e-05 MAP2K3,FC=-0.11,p=0.162976904 MAP2K3,FC=0.09,p=0.106399288 KCNJ12,FC=0.66,p=0.000382821 KCNJ12,FC=0.07,p=0.704587552

< Top >


    Array CGH Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

RP11-219A15, 3/50, 0.06 RP11-219A15, 15/50, 0.3 RP11-524F11, 13/50, 0.26 RP11-524F11, 8/50, 0.16 RP11-189D22, 14/50, 0.28 RP11-189D22, 12/50, 0.24 RP11-78O7, 13/50, 0.26 RP11-78O7, 1/50, 0.02 RP5-836L9, 4/50, 0.08 RP5-836L9, 11/50, 0.22 RP11-121A13, 6/50, 0.12 RP11-121A13, 14/50, 0.28

< Top >


    CGH Minimal Deletion Region Data        (help)      Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

PMID=12367789 PMID=14970871 PMID=9591638

< Top >


    LOH Frequency Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.

PMID=10987304 D17S1857, 12/16, 75%

< Top >


Download all image files.
Save all PNG files.    Save all PDF files.    Save all PS files.