IGDB.NSCLC Chromosome View

Chromosome 17
17p13 17p12 17p11 17q11 17q12 17q21 17q22 17q23 17q24 17q25         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
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    Lung Cancer Genes with Experimental Evidence         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: up-regulation / green : down-regulation / gray : mutation)

, , TEX14, 7.14%, 1/14

(Click the gene to hyperlink to gene view.)    

    Gene Expression Microarray Data         (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        HG_U95 (Meyerson, GSE2514)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      TOM1L1,FC=0.71,p=5.25e-05 COX11,FC=0.04,p=0.701935877 HLF,FC=-1.08,p=1.52e-06 HLF,FC=0.09,p=0.319692046 HLF,FC=-1.76,p=1.04e-12 MMD,FC=-0.23,p=0.185369471 DGKE,FC=-0.27,p=0.31822292 TRIM25,FC=0.09,p=0.596392153 COIL,FC=0.34,p=0.088330785 COIL,FC=0.22,p=0.027837283 AKAP1,FC=0.19,p=0.120454841 VEZF1,FC=-0.42,p=7.74e-05 VEZF1,FC=-0.34,p=0.000152523 SFRS1,FC=0.13,p=0.141638622 SFRS1,FC=-0.01,p=0.921994535 EPX,FC=0.42,p=0.024784286 LPO,FC=0.22,p=0.024381493 MPO,FC=-0.38,p=0.02144012 BZRAP1,FC=-0.11,p=0.435629881 SUPT4H1,FC=-0.16,p=0.014086616 MTMR4,FC=0.18,p=0.103671125 RAD51C,FC=-0.04,p=0.861559132 RAD51C,FC=0.02,p=0.92345436 PPM1E,FC=0.30,p=0.12587469 TRIM37,FC=0.17,p=0.078115622

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      TOM1L1,FC=0.47,p=0.072609807 COX11,FC=-0.20,p=0.192488951 HLF,FC=-0.90,p=0.000927857 HLF,FC=0.14,p=0.227847018 HLF,FC=-2.05,p=2.47e-14 MMD,FC=-0.34,p=0.050062328 DGKE,FC=0.54,p=0.102752101 TRIM25,FC=0.61,p=0.026884731 COIL,FC=0.39,p=0.206479431 COIL,FC=0.27,p=0.012430067 AKAP1,FC=-0.09,p=0.508775239 VEZF1,FC=-0.47,p=0.003237208 VEZF1,FC=-0.44,p=0.000367711 SFRS1,FC=0.19,p=0.131259648 SFRS1,FC=0.11,p=0.527164991 EPX,FC=0.27,p=0.261880531 LPO,FC=0.35,p=0.007909944 MPO,FC=-0.11,p=0.6611059 BZRAP1,FC=-0.15,p=0.348230093 SUPT4H1,FC=-0.18,p=0.047765738 MTMR4,FC=0.33,p=0.024016214 RAD51C,FC=0.34,p=0.288777033 RAD51C,FC=0.66,p=0.044771843 PPM1E,FC=0.43,p=0.114706862 TRIM37,FC=0.21,p=0.157612257


        HG_U133A (GSE7670, GSE17475, DCLungStudy, GSE4573, GSE10072)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      TOM1L1,FC=1.02,p=8.08e-26 COX11,FC=-0.30,p=6.92e-07 COX11,FC=0.10,p=0.163768468 COX11,FC=0.44,p=0.000406103 HLF,FC=-1.93,p=1.7e-23 HLF,FC=-1.73,p=8.45e-30 HLF,FC=-1.47,p=6.12e-15 MMD,FC=0.32,p=0.002342197 TMEM100,FC=-4.57,p=1.19e-122 PCTP,FC=-0.23,p=0.090956742 DGKE,FC=-0.40,p=0.003969383 TRIM25,FC=1.27,p=1.77e-30 COIL,FC=0.84,p=3.12e-21 COIL,FC=0.35,p=4.48e-08 SCPEP1,FC=-0.07,p=0.458505943 RNF126P1,FC=0.71,p=1.42e-11 AKAP1,FC=0.29,p=2.76e-06 AKAP1,FC=0.28,p=0.001798968 AKAP1,FC=0.15,p=0.22559531 AKAP1,FC=0.83,p=1.72e-23 CUEDC1,FC=0.82,p=8.55e-08 VEZF1,FC=-0.09,p=0.279049943 VEZF1,FC=-0.66,p=4.3e-26 VEZF1,FC=0.32,p=1.47e-09 SFRS1,FC=0.14,p=0.146003524 SFRS1,FC=0.46,p=2.42e-13 SFRS1,FC=0.97,p=2.49e-32 SFRS1,FC=0.32,p=2.63e-12 EPX,FC=-0.54,p=1.27e-07 MKS1,FC=0.18,p=0.001210357 LPO,FC=-0.16,p=0.155959648 MPO,FC=-0.43,p=0.0011451 MPO,FC=-0.32,p=1.36e-06 BZRAP1,FC=-0.49,p=4.71e-09 SUPT4H1,FC=-0.10,p=0.037081384 SUPT4H1,FC=0.99,p=4.34e-28 RNF43,FC=0.57,p=2.26e-09 MTMR4,FC=0.29,p=6.95e-10 MTMR4,FC=0.15,p=8.37e-05 SEPT4,FC=-1.12,p=2.88e-33 SEPT4,FC=-0.21,p=0.096989859 TEX14,FC=-1.43,p=1.36e-27 RAD51C,FC=0.72,p=7.95e-21 RAD51C,FC=-0.16,p=0.070481942 PPM1E,FC=0.18,p=0.222752826 TRIM37,FC=0.16,p=0.014042727 C17orf71,FC=0.24,p=3.58e-08

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      TOM1L1,FC=-0.17,p=0.00824113 COX11,FC=-1.46,p=8.53e-20 COX11,FC=-1.87,p=2.24e-26 COX11,FC=2.05,p=3.87e-24 HLF,FC=0.27,p=0.000494889 HLF,FC=0.91,p=1.84e-29 HLF,FC=-0.29,p=0.000412804 MMD,FC=-1.22,p=1.56e-47 TMEM100,FC=-5.45,p=8.89e-92 PCTP,FC=1.85,p=2.19e-58 DGKE,FC=-0.25,p=0.097441146 TRIM25,FC=0.79,p=1.23e-09 COIL,FC=-1.12,p=1.93e-12 COIL,FC=-0.60,p=4.6e-15 SCPEP1,FC=-2.80,p=3.94e-85 RNF126P1,FC=4.47,p=1.55e-101 AKAP1,FC=1.89,p=1.93e-76 AKAP1,FC=-0.14,p=0.089096115 AKAP1,FC=-1.46,p=8.62e-11 AKAP1,FC=-0.12,p=0.671613855 CUEDC1,FC=-1.45,p=6.59e-11 VEZF1,FC=0.65,p=5.65e-08 VEZF1,FC=1.37,p=3.15e-27 VEZF1,FC=1.16,p=2.78e-55 SFRS1,FC=4.31,p=1.21e-101 SFRS1,FC=-2.04,p=1.48e-85 SFRS1,FC=3.19,p=2.81e-85 SFRS1,FC=-5.84,p=1.7e-97 EPX,FC=0.93,p=7.05e-19 MKS1,FC=0.73,p=1.14e-18 LPO,FC=-2.81,p=4.77e-67 MPO,FC=4.74,p=5.97e-103 MPO,FC=1.47,p=2.09e-41 BZRAP1,FC=-1.92,p=2.26e-36 SUPT4H1,FC=2.81,p=1.97e-103 SUPT4H1,FC=2.51,p=2.33e-69 RNF43,FC=2.47,p=3.87e-100 MTMR4,FC=-2.92,p=1.51e-95 MTMR4,FC=-0.49,p=9.28e-08 SEPT4,FC=-0.48,p=1.13e-12 SEPT4,FC=1.42,p=1.61e-26 TEX14,FC=4.09,p=4.63e-85 RAD51C,FC=0.12,p=0.227078055 RAD51C,FC=-0.52,p=0.005694911 PPM1E,FC=4.37,p=1.3e-74 TRIM37,FC=-0.77,p=3.2e-26 C17orf71,FC=-1.50,p=2.34e-36


        HG_U133_Plus2 (GSE3141, GSE10245, GSE10445, GSE12667, GSE10799, GSE16538, GSE7307, GSE3526)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      KIF2B,FC=0.20,p=0.312226116 TOM1L1,FC=0.53,p=8.64e-06 COX11,FC=0.50,p=0.000290568 COX11,FC=0.07,p=0.39091058 COX11,FC=-0.20,p=0.062155245 STXBP4,FC=0.13,p=0.425656385 STXBP4,FC=0.46,p=0.030552459 STXBP4,FC=0.18,p=0.035476468 STXBP4,FC=0.11,p=0.316790684 HLF,FC=-1.94,p=2.08e-15 HLF,FC=-2.24,p=1.52e-20 HLF,FC=-1.72,p=2.37e-19 MMD,FC=0.54,p=6.05e-05 MMD,FC=0.01,p=0.9154579 TMEM100,FC=-4.10,p=9.84e-48 PCTP,FC=-0.45,p=0.002194832 ANKFN1,FC=-0.23,p=0.219420537 ANKFN1,FC=0.57,p=0.016542735 NOG,FC=-0.17,p=0.428083118 C17orf67,FC=0.15,p=0.272340957 DGKE,FC=0.12,p=0.54832069 DGKE,FC=-0.47,p=0.006724738 DGKE,FC=0.25,p=0.156748355 TRIM25,FC=-0.75,p=5.48e-20 TRIM25,FC=0.05,p=0.763340885 COIL,FC=0.45,p=0.000295308 COIL,FC=0.31,p=0.000121421 SCPEP1,FC=-0.42,p=9.42e-05 SCPEP1,FC=-0.08,p=0.553114841 RNF126P1,FC=0.06,p=0.581191539 AKAP1,FC=0.50,p=0.002620018 AKAP1,FC=0.37,p=7.43e-05 AKAP1,FC=0.28,p=0.020589712 AKAP1,FC=0.29,p=0.002075194 MSI2,FC=1.16,p=6.08e-23 MSI2,FC=1.69,p=5.83e-17 MSI2,FC=0.68,p=1.13e-06 MSI2,FC=0.32,p=0.01211618 MSI2,FC=0.07,p=0.719248257 MSI2,FC=1.28,p=1.73e-19 MSI2,FC=0.18,p=0.415811601 MRPS23,FC=0.37,p=0.001637442 CUEDC1,FC=0.02,p=0.894775303 CUEDC1,FC=0.48,p=1.1e-05 VEZF1,FC=-0.76,p=1.06e-21 VEZF1,FC=-0.52,p=4.77e-12 VEZF1,FC=-0.25,p=0.000392567 SFRS1,FC=1.05,p=9.76e-12 SFRS1,FC=0.18,p=0.035475326 SFRS1,FC=0.10,p=0.095482234 SFRS1,FC=0.29,p=0.073084165 SFRS1,FC=-0.06,p=0.298132155 DYNLL2,FC=0.37,p=2.61e-06 OR4D1,FC=0.16,p=0.393413052 OR4D2,FC=0.34,p=0.109719262 EPX,FC=0.23,p=0.155885632 MKS1,FC=0.66,p=7.28e-14 MKS1,FC=0.64,p=2.46e-07 LPO,FC=0.47,p=0.015896257 MPO,FC=-0.39,p=0.04226816 MPO,FC=-0.09,p=0.564573137 BZRAP1,FC=-0.13,p=0.244168887 SUPT4H1,FC=0.15,p=0.019722394 SUPT4H1,FC=0.24,p=0.016842919 RNF43,FC=1.01,p=6.01e-10 RNF43,FC=1.16,p=2.81e-10 HSF5,FC=-0.54,p=0.007896601 MTMR4,FC=0.57,p=1.34e-17 MTMR4,FC=0.58,p=2.94e-16 SEPT4,FC=0.42,p=0.025551877 SEPT4,FC=-0.72,p=7.63e-07 SEPT4,FC=-1.36,p=1.36e-25 C17orf47,FC=0.50,p=0.000317372 TEX14,FC=-2.51,p=1.37e-28 RAD51C,FC=0.47,p=1.52e-07 RAD51C,FC=0.29,p=0.000647226 PPM1E,FC=-0.16,p=0.470993574 PPM1E,FC=-0.20,p=0.345322012 PPM1E,FC=-0.09,p=0.687088972 TRIM37,FC=0.57,p=4.67e-13 TRIM37,FC=-0.23,p=0.128063049 SKA2,FC=0.41,p=1.34e-07 SKA2,FC=0.57,p=3.48e-08 C17orf71,FC=0.60,p=1.89e-23 GDPD1,FC=1.08,p=4.05e-08 GDPD1,FC=1.30,p=9.99e-17 GDPD1,FC=0.17,p=0.347025944 YPEL2,FC=-0.99,p=2.08e-10 YPEL2,FC=-0.32,p=0.057578166 YPEL2,FC=-0.05,p=0.50944008

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      KIF2B,FC=-0.10,p=0.605706438 TOM1L1,FC=-0.28,p=0.035766426 COX11,FC=0.26,p=0.129504583 COX11,FC=-0.30,p=0.001539222 COX11,FC=-0.68,p=9.9e-09 STXBP4,FC=0.09,p=0.641880143 STXBP4,FC=0.21,p=0.392801835 STXBP4,FC=0.01,p=0.932511318 STXBP4,FC=-0.51,p=0.000122186 HLF,FC=-1.67,p=2.22e-12 HLF,FC=-2.38,p=3.94e-26 HLF,FC=-1.43,p=3.76e-16 MMD,FC=0.65,p=5.98e-06 MMD,FC=-0.26,p=0.017278228 TMEM100,FC=-4.87,p=2.14e-49 PCTP,FC=-1.73,p=2.92e-12 ANKFN1,FC=-0.27,p=0.231491804 ANKFN1,FC=0.49,p=0.046871446 NOG,FC=-0.71,p=0.001181042 C17orf67,FC=-0.01,p=0.947380509 DGKE,FC=0.62,p=0.010107656 DGKE,FC=0.15,p=0.419306303 DGKE,FC=0.62,p=0.004909274 TRIM25,FC=-0.57,p=4.03e-12 TRIM25,FC=0.44,p=0.003880835 COIL,FC=0.81,p=1.86e-12 COIL,FC=0.37,p=8.93e-05 SCPEP1,FC=0.05,p=0.667788836 SCPEP1,FC=0.14,p=0.269038981 RNF126P1,FC=0.37,p=0.002758939 AKAP1,FC=0.21,p=0.252383675 AKAP1,FC=0.17,p=0.042164803 AKAP1,FC=0.31,p=0.002023093 AKAP1,FC=0.10,p=0.233279118 MSI2,FC=1.84,p=1.96e-26 MSI2,FC=2.30,p=2.67e-15 MSI2,FC=0.84,p=6.95e-11 MSI2,FC=0.82,p=3.35e-07 MSI2,FC=-0.25,p=0.408001484 MSI2,FC=1.68,p=3.94e-23 MSI2,FC=0.27,p=0.169966454 MRPS23,FC=-0.12,p=0.347509434 CUEDC1,FC=-0.56,p=0.000699101 CUEDC1,FC=0.65,p=1.25e-05 VEZF1,FC=-0.84,p=5.68e-21 VEZF1,FC=-0.51,p=1.92e-09 VEZF1,FC=-0.38,p=2.06e-06 SFRS1,FC=1.21,p=8.61e-14 SFRS1,FC=0.13,p=0.136570997 SFRS1,FC=0.25,p=0.001435174 SFRS1,FC=0.40,p=0.030920397 SFRS1,FC=-0.23,p=0.009468404 DYNLL2,FC=0.52,p=2.04e-09 OR4D1,FC=0.83,p=0.000100605 OR4D2,FC=1.02,p=6.78e-06 EPX,FC=0.27,p=0.104743065 MKS1,FC=0.97,p=1.58e-18 MKS1,FC=1.07,p=2.1e-15 LPO,FC=0.54,p=0.023300682 MPO,FC=-0.82,p=0.000176264 MPO,FC=0.39,p=0.014749162 BZRAP1,FC=-0.29,p=0.033430987 SUPT4H1,FC=0.19,p=0.003429748 SUPT4H1,FC=-0.05,p=0.54906793 RNF43,FC=1.04,p=1.69e-12 RNF43,FC=1.00,p=5.01e-06 HSF5,FC=-0.62,p=0.005940442 MTMR4,FC=0.61,p=1.9e-13 MTMR4,FC=0.64,p=1.25e-14 SEPT4,FC=0.53,p=0.01024426 SEPT4,FC=-1.05,p=5.48e-09 SEPT4,FC=-1.69,p=3.49e-25 C17orf47,FC=0.54,p=0.000745035 TEX14,FC=-2.52,p=7.26e-25 RAD51C,FC=0.73,p=2.02e-12 RAD51C,FC=0.69,p=3.23e-14 PPM1E,FC=0.07,p=0.758287678 PPM1E,FC=-0.44,p=0.043925711 PPM1E,FC=-0.32,p=0.213568329 TRIM37,FC=0.50,p=5.83e-12 TRIM37,FC=-0.40,p=0.016883878 SKA2,FC=0.70,p=6.12e-15 SKA2,FC=0.81,p=6.16e-12 C17orf71,FC=0.58,p=3.69e-15 GDPD1,FC=-0.12,p=0.56531355 GDPD1,FC=1.17,p=1.57e-11 GDPD1,FC=-0.31,p=0.118445143 YPEL2,FC=-1.67,p=2.34e-18 YPEL2,FC=-1.09,p=6.93e-08 YPEL2,FC=-0.35,p=0.000250132


        Stanford (GSE3398)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      COX11,FC=0.31,p=0.385331747 COX11,FC=0.64,p=0.037369153 HLF,FC=-0.35,p=0.327279478 MMD,FC=0.37,p=0.245931914 PCTP,FC=0.45,p=0.162393305 COIL,FC=0.49,p=0.073788466 AKAP1,FC=0.67,p=0.047367997 MPO,FC=1.48,p=0.115677226 MPO,FC=0.03,p=0.946794184 MTMR4,FC=1.19,p=0.000532137 RAD51C,FC=0.68,p=0.051934912 RAD51C,FC=0.52,p=0.095766792

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      COX11,FC=-0.02,p=0.940296182 COX11,FC=0.41,p=0.143294147 HLF,FC=-0.16,p=0.651154658 MMD,FC=0.20,p=0.488647992 PCTP,FC=0.33,p=0.237375619 COIL,FC=1.06,p=0.000486038 AKAP1,FC=0.22,p=0.376208606 MPO,FC=1.79,p=0.03819146 MPO,FC=0.31,p=0.510297501 MTMR4,FC=1.02,p=0.002906367 RAD51C,FC=0.98,p=0.014433395 RAD51C,FC=0.47,p=0.181368757


        Agilent_HS_21.6K (GSE11969)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      COX11,FC=0.11,p=0.050836439 HLF,FC=0.03,p=0.35385457 MMD,FC=0.16,p=0.193226863 PCTP,FC=-0.25,p=0.035289806 NOG,FC=0.13,p=0.040598157 DGKE,FC=0.01,p=0.895031166 TRIM25,FC=0.06,p=0.139997348 COIL,FC=0.16,p=0.010769809 SCPEP1,FC=0.10,p=0.276098406 AKAP1,FC=0.21,p=0.001078284 MSI2,FC=0.11,p=0.002130162 MSI2,FC=0.19,p=6.62e-08 MRPS23,FC=0.20,p=1.82e-05 CUEDC1,FC=0.02,p=0.734477337 SFRS1,FC=0.04,p=0.533630629 OR4D2,FC=0.01,p=0.826131177 EPX,FC=0.01,p=0.868377087 LPO,FC=0.07,p=0.011982373 MPO,FC=-0.05,p=0.113722064 BZRAP1,FC=0.09,p=0.307981825 BZRAP1,FC=-0.00,p=0.972887286 SUPT4H1,FC=0.14,p=0.030179315 MTMR4,FC=-0.01,p=0.901996572 TEX14,FC=-0.09,p=0.05878524 RAD51C,FC=0.17,p=6.98e-06 PPM1E,FC=0.07,p=0.008717753 TRIM37,FC=0.07,p=0.003170266 YPEL2,FC=-0.85,p=2.63e-09

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      COX11,FC=0.10,p=0.031288655 HLF,FC=0.02,p=0.381791723 MMD,FC=0.10,p=0.317283269 PCTP,FC=-0.47,p=0.00089308 NOG,FC=0.05,p=0.346537983 DGKE,FC=-0.02,p=0.743048847 TRIM25,FC=0.06,p=0.081441928 COIL,FC=0.22,p=0.0025362 SCPEP1,FC=0.25,p=0.010825403 AKAP1,FC=0.11,p=0.072517014 MSI2,FC=0.17,p=0.002131447 MSI2,FC=0.30,p=1.74e-06 MRPS23,FC=0.21,p=0.00011753 CUEDC1,FC=-0.06,p=0.135748253 SFRS1,FC=0.08,p=0.111508241 OR4D2,FC=0.01,p=0.77747546 EPX,FC=0.08,p=0.531624166 LPO,FC=0.08,p=0.01924652 MPO,FC=-0.05,p=0.077706111 BZRAP1,FC=0.05,p=0.54074296 BZRAP1,FC=-0.08,p=0.075158727 SUPT4H1,FC=0.12,p=0.067706065 MTMR4,FC=-0.00,p=0.997271974 TEX14,FC=-0.12,p=0.002108677 RAD51C,FC=0.21,p=0.000117266 PPM1E,FC=0.06,p=0.033313091 TRIM37,FC=0.08,p=0.002589535 YPEL2,FC=-0.93,p=6.27e-13


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    Copy Number Alteration Data        (help)
            ( red: amplification / green : deletion)

         Adenocarcinoma          Squamous Cell Carcinoma
        Meyerson Adenocarcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE17958 Squamous Cell Carcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE12280_SGOL (SCC / aCGH)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

      

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    miRNA Expression Data        (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        GSE15201
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-miR-142,Mean=-3.59 hsa-miR-142,Mean=-1.03

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-miR-142,Mean=-3.44 hsa-miR-142,Mean=-0.83

        GSE18692
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-mir-142,Mean=0.39 hsa-mir-301a,Mean=0.02

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-mir-142,Mean=0.38 hsa-mir-301a,Mean=0.16

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    Paired (U133A/aCGH) AD Sample Data        (help) (PubMed)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

TOM1L1,FC=1.20,p=2.87e-30 COX11,FC=-0.24,p=0.000623691 COX11,FC=0.33,p=1.86e-06 COX11,FC=0.87,p=1.55e-08 HLF,FC=-1.69,p=2.09e-16 HLF,FC=-1.64,p=3.02e-15 HLF,FC=-1.28,p=2.94e-10 MMD,FC=0.01,p=0.910538145 TMEM100,FC=-4.47,p=1.99e-67 PCTP,FC=-0.28,p=0.086687117 DGKE,FC=-0.54,p=0.000531179 TRIM25,FC=1.62,p=1.03e-51 COIL,FC=1.12,p=8.07e-27 COIL,FC=0.11,p=0.044618276 SCPEP1,FC=-0.05,p=0.61110482 RNF126P1,FC=0.91,p=1.61e-12 AKAP1,FC=0.24,p=0.000833367 AKAP1,FC=0.39,p=1.74e-05 AKAP1,FC=0.14,p=0.322070517 AKAP1,FC=1.01,p=2.03e-25 CUEDC1,FC=1.38,p=3.4e-16 VEZF1,FC=0.22,p=0.07466849 VEZF1,FC=-0.56,p=2.54e-16 VEZF1,FC=0.45,p=7.06e-14 SFRS1,FC=0.10,p=0.300586931 SFRS1,FC=0.50,p=1.03e-17 SFRS1,FC=0.99,p=2.85e-27 SFRS1,FC=0.41,p=8.57e-17 EPX,FC=-0.59,p=1.07e-07 MKS1,FC=-0.20,p=0.014385367 LPO,FC=-0.39,p=0.004992977 MPO,FC=-0.52,p=0.000297206 MPO,FC=-0.53,p=3.49e-08 BZRAP1,FC=-0.56,p=1.24e-08 SUPT4H1,FC=-0.22,p=2.68e-06 SUPT4H1,FC=0.92,p=7.86e-22 RNF43,FC=0.37,p=0.000204219 MTMR4,FC=0.13,p=0.00536783 MTMR4,FC=-0.08,p=0.104856709 SEPT4,FC=-0.93,p=2.63e-21 SEPT4,FC=-0.73,p=3.03e-07 TEX14,FC=-1.58,p=1.74e-18 RAD51C,FC=0.46,p=4.97e-08 RAD51C,FC=-0.30,p=0.001239383 PPM1E,FC=0.16,p=0.339731576 TRIM37,FC=-0.04,p=0.536829982 C17orf71,FC=0.15,p=0.001676615

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    Array CGH Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

RP11-429O1, 4/50, 0.08 RP11-429O1, 8/50, 0.16 RP11-248L3, 11/50, 0.22 RP11-248L3, 4/50, 0.08 RP5-1043H15, 5/50, 0.1 RP5-1043H15, 7/50, 0.14 RP11-312B18, 3/50, 0.06 RP11-312B18, 7/50, 0.14 RP11-372K20, 2/50, 0.04 RP11-372K20, 0/50, 0 RP11-515O17, 3/50, 0.06 RP11-515O17, 2/50, 0.04 RP11-112J9, 7/50, 0.14 RP11-112J9, 2/50, 0.04 RP11-506H21, 6/50, 0.12 RP11-506H21, 1/50, 0.02 RP11-579A4, 7/50, 0.14 RP11-579A4, 0/50, 0 RP11-567L7, 13/50, 0.26 RP11-567L7, 0/50, 0

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    CGH Minimal Deletion Region Data        (help)      Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

PMID=11748636

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    LOH Frequency Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.

Our unpublished data D17S957, 15/33, 45% Our unpublished data D17S1290, 18/40, 45% PMID=10987304 D17S787, 2/15, 13%

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