IGDB.NSCLC Chromosome View

Chromosome 7
7p22 7p21 7p15 7p14 7p13 7p12 7p11 7q11 7q21 7q22 7q31 7q32 7q33 7q34 7q35 7q36         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
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    Lung Cancer Genes with Experimental Evidence         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: up-regulation / green : down-regulation / gray : mutation)

FSCN1, up, 196/220(89%) EIF2AK1, 1.89%, 1/53

(Click the gene to hyperlink to gene view.)    

    Gene Expression Microarray Data         (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        HG_U95 (Meyerson, GSE2514)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      PDGFA,FC=-0.54,p=0.000146661 PDGFA,FC=-0.35,p=0.046052361 PRKAR1B,FC=-0.06,p=0.554111435 UNC84A,FC=-0.02,p=0.853677703 GPER,FC=-0.98,p=7.48e-11 INTS1,FC=0.34,p=0.012173529 MAFK,FC=0.23,p=0.248438857 MAD1L1,FC=0.10,p=0.566382138 NUDT1,FC=0.41,p=4.68e-06 EIF3B,FC=0.46,p=4.09e-05 LFNG,FC=0.17,p=0.331315623 IQCE,FC=-0.09,p=0.541069884 GNA12,FC=0.57,p=1.01e-06 GNA12,FC=-0.10,p=0.698424756 WIPI2,FC=0.10,p=0.225895954 FSCN1,FC=0.29,p=0.117386262 RNF216,FC=0.48,p=0.012268644 EIF2AK1,FC=0.50,p=0.000190485 CYTH3,FC=-0.28,p=0.043327567 RAC1,FC=-0.12,p=0.103105563 RAC1,FC=0.17,p=0.036518398 KDELR2,FC=0.03,p=0.755904426

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      PDGFA,FC=-0.51,p=0.001332939 PDGFA,FC=-0.56,p=0.019012247 PRKAR1B,FC=0.07,p=0.57552398 UNC84A,FC=0.03,p=0.821696716 GPER,FC=-1.00,p=1.27e-05 INTS1,FC=0.02,p=0.906415451 MAFK,FC=-0.06,p=0.823702172 MAD1L1,FC=-0.23,p=0.364305258 NUDT1,FC=1.06,p=1.46e-11 EIF3B,FC=0.49,p=0.000119379 LFNG,FC=-0.15,p=0.529517292 IQCE,FC=-0.09,p=0.675529056 GNA12,FC=0.43,p=0.010013263 GNA12,FC=-0.33,p=0.321394619 WIPI2,FC=0.09,p=0.490772574 FSCN1,FC=1.78,p=1.97e-12 RNF216,FC=0.19,p=0.417473169 EIF2AK1,FC=0.51,p=0.002033636 CYTH3,FC=-0.54,p=0.005861606 RAC1,FC=0.00,p=0.987473331 RAC1,FC=0.32,p=0.000563729 KDELR2,FC=-0.46,p=8.72e-05


        HG_U133A (GSE7670, GSE17475, DCLungStudy, GSE4573, GSE10072)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      PDGFA,FC=-0.20,p=0.089151857 PDGFA,FC=-0.56,p=4.91e-10 PRKAR1B,FC=-0.59,p=1.32e-11 PRKAR1B,FC=-0.03,p=0.769836982 HEATR2,FC=0.45,p=1.58e-19 UNC84A,FC=0.86,p=4.76e-06 C7orf20,FC=-0.06,p=0.407057772 C7orf20,FC=0.03,p=0.753580268 ADAP1,FC=-0.31,p=3.74e-07 ADAP1,FC=0.54,p=0.000195182 CYP2W1,FC=0.34,p=0.007635652 GPER,FC=-2.49,p=1.73e-55 GPER,FC=-1.38,p=6.5e-18 MICALL2,FC=0.53,p=3.97e-11 INTS1,FC=0.12,p=0.091291228 INTS1,FC=0.98,p=3.84e-12 MAFK,FC=0.73,p=6.75e-05 MAD1L1,FC=1.06,p=6.1e-18 FTSJ2,FC=0.63,p=3.08e-19 FTSJ2,FC=0.36,p=2.12e-09 NUDT1,FC=1.54,p=4.32e-15 EIF3B,FC=0.54,p=2.42e-16 EIF3B,FC=1.04,p=4.37e-41 EIF3B,FC=0.55,p=1.32e-18 CHST12,FC=0.28,p=0.000138787 LFNG,FC=-0.13,p=0.349037284 IQCE,FC=0.50,p=9.28e-08 IQCE,FC=-0.00,p=0.976277961 GNA12,FC=-0.01,p=0.879732181 C9orf68,FC=-0.22,p=0.117645842 KIAA0415,FC=0.37,p=1.88e-05 WIPI2,FC=0.30,p=1.73e-08 WIPI2,FC=0.27,p=2.06e-07 WIPI2,FC=-0.22,p=6.35e-06 FBXL18,FC=0.23,p=0.001428753 FBXL18,FC=0.49,p=1.13e-06 FSCN1,FC=0.73,p=7.27e-06 FSCN1,FC=1.00,p=2.42e-13 RNF216,FC=0.11,p=0.061709361 RNF216,FC=0.15,p=0.013186363 EVC,FC=-0.60,p=0.000224476 AIMP2,FC=0.60,p=1.92e-21 AIMP2,FC=0.40,p=5.38e-11 AIMP2,FC=0.56,p=5.36e-20 EIF2AK1,FC=0.65,p=9.74e-32 CYTH3,FC=0.62,p=6.41e-07 RAC1,FC=-0.10,p=0.030966658 KDELR2,FC=1.03,p=1.46e-59 KDELR2,FC=1.55,p=9.7e-75 KDELR2,FC=0.43,p=7.17e-10 ZDHHC4,FC=0.48,p=1.38e-09 C7orf26,FC=-0.27,p=3.61e-10 C7orf26,FC=-0.03,p=0.768439221 ZNF12,FC=0.01,p=0.908377767 C7orf28B,FC=1.24,p=6.22e-27 C1GALT1,FC=0.69,p=2.74e-13

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      PDGFA,FC=-2.52,p=2.82e-47 PDGFA,FC=-0.11,p=0.148344003 PRKAR1B,FC=1.33,p=5.83e-44 PRKAR1B,FC=5.28,p=3.36e-100 HEATR2,FC=-1.79,p=6.83e-70 UNC84A,FC=-0.62,p=9.8e-06 C7orf20,FC=-5.39,p=1e-96 C7orf20,FC=1.64,p=3.16e-54 ADAP1,FC=-3.71,p=5.52e-113 ADAP1,FC=-0.84,p=8.53e-06 CYP2W1,FC=-1.31,p=6.7e-11 GPER,FC=-0.80,p=3.85e-11 GPER,FC=2.97,p=3.12e-72 MICALL2,FC=-0.86,p=1.72e-13 INTS1,FC=2.07,p=1.9e-38 INTS1,FC=4.29,p=8.97e-109 MAFK,FC=-1.07,p=2.76e-15 MAD1L1,FC=-0.46,p=0.001699671 FTSJ2,FC=2.03,p=1.41e-71 FTSJ2,FC=0.60,p=5.75e-16 NUDT1,FC=3.55,p=2.45e-83 EIF3B,FC=-3.50,p=1.21e-99 EIF3B,FC=-5.71,p=2.39e-117 EIF3B,FC=-4.68,p=2.39e-99 CHST12,FC=1.13,p=8.18e-36 LFNG,FC=4.75,p=4.58e-106 IQCE,FC=-2.82,p=9.34e-69 IQCE,FC=-3.76,p=2.34e-68 GNA12,FC=-0.28,p=7.17e-05 C9orf68,FC=3.64,p=4.76e-84 KIAA0415,FC=3.07,p=7.03e-69 WIPI2,FC=0.63,p=2.41e-15 WIPI2,FC=0.15,p=0.141219878 WIPI2,FC=-4.75,p=6.05e-75 FBXL18,FC=-0.96,p=1.92e-14 FBXL18,FC=1.07,p=2.08e-12 FSCN1,FC=3.21,p=5.36e-84 FSCN1,FC=0.40,p=0.000901648 RNF216,FC=2.20,p=2.26e-81 RNF216,FC=0.60,p=5.67e-17 EVC,FC=-0.18,p=0.159557913 AIMP2,FC=2.22,p=5.85e-97 AIMP2,FC=0.03,p=0.759069711 AIMP2,FC=-2.17,p=1.96e-54 EIF2AK1,FC=-9.44,p=2.35e-112 CYTH3,FC=2.95,p=3.05e-15 RAC1,FC=-11.15,p=1.1e-247 KDELR2,FC=-0.93,p=1.71e-24 KDELR2,FC=-2.34,p=4.81e-98 KDELR2,FC=-4.41,p=5.81e-134 ZDHHC4,FC=-4.32,p=5.78e-104 C7orf26,FC=-0.33,p=6.21e-09 C7orf26,FC=0.19,p=0.015402891 ZNF12,FC=-1.94,p=9.13e-42 C7orf28B,FC=-0.43,p=0.019059631 C1GALT1,FC=-0.52,p=0.000206476


        HG_U133_Plus2 (GSE3141, GSE10245, GSE10445, GSE12667, GSE10799, GSE16538, GSE7307, GSE3526)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      PDGFA,FC=-0.03,p=0.796929519 PDGFA,FC=-0.15,p=0.488869351 PRKAR1B,FC=0.50,p=0.000579729 PRKAR1B,FC=0.27,p=0.205170204 PRKAR1B,FC=-0.14,p=0.380599737 HEATR2,FC=0.79,p=1.39e-25 HEATR2,FC=0.28,p=0.121459244 HEATR2,FC=0.55,p=0.011556701 UNC84A,FC=0.60,p=0.011808587 UNC84A,FC=0.11,p=0.575518295 C7orf20,FC=0.22,p=0.006900282 C7orf20,FC=0.08,p=0.532179673 C7orf20,FC=0.63,p=2.24e-14 C7orf20,FC=0.76,p=9.72e-10 ADAP1,FC=0.51,p=0.000971735 ADAP1,FC=0.37,p=0.000619721 COX19,FC=-0.80,p=2.18e-06 COX19,FC=0.07,p=0.568698373 CYP2W1,FC=-0.25,p=0.106869388 C7orf50,FC=0.69,p=3.58e-16 C7orf50,FC=-0.11,p=0.435225894 C7orf50,FC=0.12,p=0.404299153 GPR146,FC=-2.32,p=6.16e-48 GPER,FC=-2.10,p=8.42e-23 GPER,FC=-0.95,p=1.78e-06 ZFAND2A,FC=-0.11,p=0.297301624 MICALL2,FC=0.66,p=3.62e-08 MICALL2,FC=0.63,p=0.000128387 INTS1,FC=-0.30,p=0.11298542 INTS1,FC=0.45,p=7.36e-07 MAFK,FC=-0.04,p=0.748499354 MAFK,FC=0.28,p=0.108756276 TMEM184A,FC=0.60,p=0.000179062 TMEM184A,FC=2.68,p=6.55e-33 PSMG3,FC=1.05,p=5.66e-26 KIAA1908,FC=-0.10,p=0.567836986 ELFN1,FC=0.28,p=0.022989099 MAD1L1,FC=0.15,p=0.163935547 MAD1L1,FC=0.38,p=0.02514052 FTSJ2,FC=0.58,p=7.95e-14 FTSJ2,FC=0.50,p=1.38e-14 NUDT1,FC=0.64,p=1.02e-05 SNX8,FC=0.15,p=0.224552313 EIF3B,FC=0.27,p=0.005904865 EIF3B,FC=0.07,p=0.466274768 EIF3B,FC=0.00,p=0.979839373 EIF3B,FC=0.67,p=5.78e-17 EIF3B,FC=0.72,p=2.27e-17 CHST12,FC=0.14,p=0.277027408 CHST12,FC=0.14,p=0.067243773 CHST12,FC=-0.02,p=0.824870876 LFNG,FC=0.84,p=4.33e-06 LFNG,FC=0.42,p=0.02395237 C7orf27,FC=0.73,p=5.44e-13 IQCE,FC=0.16,p=0.084561346 IQCE,FC=0.69,p=1.54e-10 TTYH3,FC=1.09,p=1.25e-17 AMZ1,FC=0.63,p=8.06e-09 AMZ1,FC=0.68,p=3.21e-05 GNA12,FC=0.44,p=1.83e-07 GNA12,FC=0.14,p=0.12183919 CARD11,FC=0.48,p=0.019072536 CARD11,FC=0.38,p=0.013470459 SDK1,FC=-0.00,p=0.986979514 SDK1,FC=0.17,p=0.28211019 C9orf68,FC=-0.64,p=0.002026064 FOXK1,FC=0.25,p=0.128931595 FOXK1,FC=0.22,p=0.012748301 KIAA0415,FC=0.23,p=0.002819389 RADIL,FC=-1.51,p=4.81e-24 MMD2,FC=0.22,p=0.161379123 MMD2,FC=0.20,p=0.067530574 RBAK,FC=0.84,p=4.86e-05 RBAK,FC=0.51,p=0.001187665 RBAK,FC=0.20,p=0.006678623 LOC389458,FC=0.17,p=0.316975939 WIPI2,FC=0.24,p=0.000520669 WIPI2,FC=0.50,p=0.000359847 WIPI2,FC=0.61,p=4.03e-07 WIPI2,FC=0.24,p=0.002585184 WIPI2,FC=0.11,p=0.174314097 SLC29A4,FC=1.41,p=1.31e-10 TNRC18,FC=0.33,p=0.000921138 TNRC18,FC=-0.08,p=0.701348377 TNRC18,FC=0.55,p=1.58e-07 TNRC18,FC=0.34,p=0.064838994 TNRC18,FC=0.61,p=6.11e-09 TNRC18,FC=-0.04,p=0.786520117 FBXL18,FC=0.51,p=0.002878925 FBXL18,FC=0.27,p=0.00995423 FBXL18,FC=0.54,p=1.22e-05 FSCN1,FC=0.77,p=6.99e-07 FSCN1,FC=0.63,p=0.001231689 RNF216,FC=-0.01,p=0.97201391 RNF216,FC=0.26,p=0.00067864 RNF216,FC=0.09,p=0.352785299 RNF216,FC=0.27,p=0.006577726 RNF216,FC=0.58,p=1.27e-14 EVC,FC=-0.75,p=3.41e-05 AIMP2,FC=0.28,p=0.003313996 AIMP2,FC=0.74,p=8.59e-21 AIMP2,FC=0.81,p=2.98e-21 EIF2AK1,FC=1.18,p=4.77e-35 USP42,FC=0.16,p=0.026040908 USP42,FC=0.09,p=0.296941841 USP42,FC=0.61,p=0.000460556 CYTH3,FC=-1.17,p=7.39e-07 CYTH3,FC=0.03,p=0.874182321 CYTH3,FC=0.27,p=0.077376516 CYTH3,FC=-0.34,p=0.001428155 C7orf70,FC=0.66,p=1.51e-13 RAC1,FC=0.18,p=0.109131184 RAC1,FC=0.09,p=0.110731793 DAGLB,FC=0.56,p=3.06e-05 DAGLB,FC=0.23,p=0.007136768 DAGLB,FC=0.28,p=0.033132114 DAGLB,FC=0.12,p=0.104827751 KDELR2,FC=1.06,p=1.38e-33 KDELR2,FC=1.61,p=4.49e-53 KDELR2,FC=0.42,p=1.68e-06 ZDHHC4,FC=0.11,p=0.490933537 ZDHHC4,FC=0.45,p=1.24e-07 C7orf26,FC=-0.08,p=0.357855148 C7orf26,FC=0.05,p=0.392324685 ZNF12,FC=-0.36,p=0.003049523 ZNF12,FC=-0.35,p=0.000112109 ZNF12,FC=0.13,p=0.074494969 ZNF12,FC=-0.28,p=0.001891727 C7orf28B,FC=-0.25,p=0.130738908 C1GALT1,FC=0.78,p=2.76e-13

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      PDGFA,FC=0.04,p=0.749178987 PDGFA,FC=-0.72,p=0.004417795 PRKAR1B,FC=0.78,p=3.74e-06 PRKAR1B,FC=-0.16,p=0.484988204 PRKAR1B,FC=0.56,p=5.83e-05 HEATR2,FC=0.73,p=1.29e-16 HEATR2,FC=0.11,p=0.541374537 HEATR2,FC=0.98,p=0.000411708 UNC84A,FC=-0.27,p=0.253701961 UNC84A,FC=-0.26,p=0.298046535 C7orf20,FC=0.38,p=3.23e-05 C7orf20,FC=0.46,p=0.001793776 C7orf20,FC=0.57,p=1.5e-09 C7orf20,FC=0.65,p=8.91e-06 ADAP1,FC=0.28,p=0.103039613 ADAP1,FC=0.11,p=0.299525759 COX19,FC=-1.33,p=1.92e-11 COX19,FC=0.11,p=0.407835618 CYP2W1,FC=-0.23,p=0.222073686 C7orf50,FC=0.45,p=5.98e-07 C7orf50,FC=0.14,p=0.349055379 C7orf50,FC=0.28,p=0.08948714 GPR146,FC=-2.61,p=1.11e-40 GPER,FC=-2.25,p=1.82e-21 GPER,FC=-1.36,p=9.42e-10 ZFAND2A,FC=-0.22,p=0.059990612 MICALL2,FC=0.56,p=1.06e-05 MICALL2,FC=0.20,p=0.286913533 INTS1,FC=-0.70,p=0.00046904 INTS1,FC=0.49,p=1.4e-05 MAFK,FC=-0.39,p=0.001224033 MAFK,FC=-0.00,p=0.979366059 TMEM184A,FC=0.37,p=0.011097257 TMEM184A,FC=1.72,p=5.46e-11 PSMG3,FC=1.16,p=1.12e-23 KIAA1908,FC=-0.85,p=6.37e-06 ELFN1,FC=0.60,p=3.41e-05 MAD1L1,FC=0.13,p=0.247543534 MAD1L1,FC=0.27,p=0.211315971 FTSJ2,FC=0.57,p=2.29e-10 FTSJ2,FC=0.80,p=4.28e-21 NUDT1,FC=1.37,p=4.92e-20 SNX8,FC=-0.15,p=0.221651767 EIF3B,FC=0.43,p=3.33e-05 EIF3B,FC=0.39,p=0.000126722 EIF3B,FC=-0.02,p=0.862166699 EIF3B,FC=1.00,p=2.09e-23 EIF3B,FC=1.02,p=5.73e-23 CHST12,FC=-0.27,p=0.017923841 CHST12,FC=-0.05,p=0.570907885 CHST12,FC=-0.28,p=0.005071564 LFNG,FC=0.17,p=0.361074001 LFNG,FC=-0.74,p=0.000538501 C7orf27,FC=1.24,p=8.18e-19 IQCE,FC=-0.12,p=0.231988766 IQCE,FC=0.33,p=0.012051374 TTYH3,FC=1.63,p=4.43e-19 AMZ1,FC=1.07,p=1.42e-17 AMZ1,FC=0.74,p=0.000189638 GNA12,FC=0.43,p=1.08e-06 GNA12,FC=0.22,p=0.016066553 CARD11,FC=0.56,p=0.016322079 CARD11,FC=0.66,p=6.18e-05 SDK1,FC=1.06,p=8.29e-13 SDK1,FC=1.35,p=8.33e-19 C9orf68,FC=-1.29,p=1.39e-08 FOXK1,FC=0.21,p=0.255739135 FOXK1,FC=0.69,p=1.39e-14 KIAA0415,FC=0.15,p=0.082734628 RADIL,FC=-1.34,p=1.2e-14 MMD2,FC=0.59,p=0.000189487 MMD2,FC=0.61,p=4.28e-06 RBAK,FC=0.77,p=1.38e-05 RBAK,FC=0.46,p=0.018373613 RBAK,FC=0.31,p=0.000127107 LOC389458,FC=-0.04,p=0.813045879 WIPI2,FC=0.14,p=0.042959264 WIPI2,FC=0.95,p=1.21e-08 WIPI2,FC=1.04,p=8.45e-12 WIPI2,FC=-0.09,p=0.297779497 WIPI2,FC=0.09,p=0.288222159 SLC29A4,FC=1.33,p=7.58e-08 TNRC18,FC=0.73,p=9.19e-10 TNRC18,FC=0.05,p=0.852874507 TNRC18,FC=0.75,p=3.14e-13 TNRC18,FC=0.05,p=0.69241122 TNRC18,FC=0.80,p=1.14e-07 TNRC18,FC=-0.34,p=0.031568112 FBXL18,FC=0.14,p=0.42504941 FBXL18,FC=0.30,p=0.020374088 FBXL18,FC=0.52,p=0.001000582 FSCN1,FC=2.33,p=4.16e-26 FSCN1,FC=2.51,p=7.94e-33 RNF216,FC=-0.20,p=0.159447704 RNF216,FC=0.47,p=1.02e-08 RNF216,FC=0.01,p=0.910315242 RNF216,FC=0.72,p=2.67e-11 RNF216,FC=1.02,p=1.91e-26 EVC,FC=-1.26,p=3.8e-08 AIMP2,FC=0.27,p=0.004658393 AIMP2,FC=0.71,p=1.23e-17 AIMP2,FC=0.82,p=4.67e-20 EIF2AK1,FC=1.25,p=1.69e-28 USP42,FC=0.43,p=4.4e-08 USP42,FC=0.22,p=0.025256006 USP42,FC=0.53,p=0.00746704 CYTH3,FC=-1.94,p=1.29e-10 CYTH3,FC=-0.01,p=0.964887284 CYTH3,FC=0.41,p=0.032084961 CYTH3,FC=-0.73,p=3.2e-14 C7orf70,FC=0.53,p=3.75e-07 RAC1,FC=0.17,p=0.076446843 RAC1,FC=0.01,p=0.817324999 DAGLB,FC=0.42,p=0.017803775 DAGLB,FC=-0.12,p=0.229787797 DAGLB,FC=-0.19,p=0.243778081 DAGLB,FC=-0.14,p=0.103491396 KDELR2,FC=1.05,p=1.88e-25 KDELR2,FC=1.50,p=4.47e-36 KDELR2,FC=0.10,p=0.34021548 ZDHHC4,FC=0.57,p=0.000836609 ZDHHC4,FC=0.33,p=0.000461547 C7orf26,FC=-0.07,p=0.546595768 C7orf26,FC=0.20,p=0.008155413 ZNF12,FC=-0.50,p=1.01e-05 ZNF12,FC=-0.50,p=2.59e-06 ZNF12,FC=-0.20,p=0.025423663 ZNF12,FC=-0.47,p=9.65e-06 C7orf28B,FC=-0.92,p=1.17e-06 C1GALT1,FC=0.12,p=0.298980368


        Stanford (GSE3398)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      PDGFA,FC=-0.36,p=0.160897393 PRKAR1B,FC=0.13,p=0.676631882 MAD1L1,FC=0.16,p=0.536550443 NUDT1,FC=1.10,p=0.000280443 SNX8,FC=0.62,p=0.220945299 SNX8,FC=0.04,p=0.885061234 LFNG,FC=0.12,p=0.636911141 GNA12,FC=0.29,p=0.249632043 GNA12,FC=0.16,p=0.632608992 KIAA0415,FC=0.41,p=0.116227206 RBAK,FC=0.16,p=0.452677611 RBAK,FC=0.74,p=0.108307566 RAC1,FC=0.16,p=0.481237263 RAC1,FC=0.63,p=0.021340574 KDELR2,FC=0.56,p=0.01151929 KDELR2,FC=-1.36,p=3.32e-07 KDELR2,FC=1.03,p=0.000364923

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      PDGFA,FC=-0.49,p=0.109282193 PRKAR1B,FC=0.24,p=0.410841291 MAD1L1,FC=-0.31,p=0.378994917 NUDT1,FC=1.68,p=2.5e-06 SNX8,FC=-0.21,p=0.735428826 SNX8,FC=0.10,p=0.736951475 LFNG,FC=-0.11,p=0.628774615 GNA12,FC=0.13,p=0.704491437 GNA12,FC=0.04,p=0.854249256 KIAA0415,FC=0.17,p=0.529031099 RBAK,FC=-0.25,p=0.22789784 RBAK,FC=1.03,p=0.00325334 RAC1,FC=-0.33,p=0.209590555 RAC1,FC=0.17,p=0.660225782 KDELR2,FC=0.17,p=0.570248575 KDELR2,FC=-1.20,p=0.001184474 KDELR2,FC=0.95,p=0.006421407


        Agilent_HS_21.6K (GSE11969)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      PDGFA,FC=-0.04,p=0.357494881 PDGFA,FC=-0.06,p=0.184370926 PRKAR1B,FC=0.04,p=0.37996291 UNC84A,FC=0.06,p=0.192047528 C7orf20,FC=0.14,p=0.01790031 CYP2W1,FC=0.03,p=0.752531715 GPR146,FC=-0.63,p=7.06e-19 MAFK,FC=0.18,p=0.053730637 MAFK,FC=-0.15,p=0.025262095 KIAA1908,FC=-0.09,p=0.036187083 MAD1L1,FC=-0.16,p=0.000267935 FTSJ2,FC=0.13,p=0.010824646 NUDT1,FC=0.11,p=0.139354948 SNX8,FC=-0.01,p=0.795433133 LFNG,FC=0.01,p=0.95219163 C7orf27,FC=0.10,p=0.209440038 IQCE,FC=0.10,p=0.234507602 IQCE,FC=0.31,p=0.00348825 TTYH3,FC=0.35,p=0.000659853 GNA12,FC=-0.00,p=0.989782207 CARD11,FC=0.17,p=0.062080915 SDK1,FC=0.07,p=0.374728168 SDK1,FC=0.14,p=0.446662843 FOXK1,FC=-0.12,p=0.015388946 FOXK1,FC=0.03,p=0.270982423 RBAK,FC=0.32,p=0.000581466 SLC29A4,FC=-0.02,p=0.369055765 FSCN1,FC=0.04,p=0.082898767 KDELR2,FC=0.09,p=0.159810551 KDELR2,FC=0.38,p=0.001756018 ZDHHC4,FC=0.01,p=0.851691907 C7orf26,FC=-0.35,p=8.86e-13 ZNF12,FC=-0.00,p=0.99046222 C1GALT1,FC=0.26,p=0.00105694

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      PDGFA,FC=-0.07,p=0.309521454 PDGFA,FC=-0.09,p=0.042997456 PRKAR1B,FC=0.04,p=0.365723015 UNC84A,FC=0.09,p=0.240365211 C7orf20,FC=0.16,p=0.005081493 CYP2W1,FC=0.03,p=0.686295214 GPR146,FC=-0.67,p=3.25e-14 MAFK,FC=0.17,p=0.057177868 MAFK,FC=-0.19,p=0.001007 KIAA1908,FC=-0.15,p=8.97e-07 MAD1L1,FC=-0.16,p=0.003339055 FTSJ2,FC=0.14,p=0.000420189 NUDT1,FC=0.37,p=8.94e-05 SNX8,FC=0.00,p=0.994135871 LFNG,FC=-0.18,p=0.117361846 C7orf27,FC=0.10,p=0.154449171 IQCE,FC=-0.04,p=0.417439571 IQCE,FC=0.33,p=0.001173861 TTYH3,FC=0.27,p=0.001717946 GNA12,FC=0.00,p=0.972415119 CARD11,FC=0.20,p=0.019313648 SDK1,FC=0.23,p=0.028012097 SDK1,FC=0.43,p=0.032573118 FOXK1,FC=-0.12,p=0.000639086 FOXK1,FC=0.03,p=0.475832489 RBAK,FC=0.42,p=5.06e-05 SLC29A4,FC=-0.03,p=0.286160002 FSCN1,FC=0.13,p=0.000599139 KDELR2,FC=-0.05,p=0.391586786 KDELR2,FC=0.47,p=1.58e-06 ZDHHC4,FC=-0.04,p=0.454315996 C7orf26,FC=-0.40,p=1.19e-14 ZNF12,FC=-0.02,p=0.835920444 C1GALT1,FC=0.16,p=0.003863652


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    Copy Number Alteration Data        (help)
            ( red: amplification / green : deletion)

         Adenocarcinoma          Squamous Cell Carcinoma
        Meyerson Adenocarcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE17958 Squamous Cell Carcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE12280_SGOL (SCC / aCGH)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

      

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    miRNA Expression Data        (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        GSE15201
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        GSE18692
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-mir-339,Mean=0.02

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-mir-339,Mean=0.04

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    Paired (U133A/aCGH) AD Sample Data        (help) (PubMed)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

PDGFA,FC=0.28,p=0.025379783 PDGFA,FC=-0.15,p=0.142150601 PRKAR1B,FC=-0.73,p=1.26e-16 PRKAR1B,FC=-0.29,p=0.032787049 HEATR2,FC=0.31,p=3.5e-08 UNC84A,FC=1.30,p=4.48e-10 C7orf20,FC=-0.01,p=0.868771691 C7orf20,FC=-0.19,p=0.021777999 ADAP1,FC=-0.31,p=4.63e-07 ADAP1,FC=1.17,p=1.03e-15 CYP2W1,FC=0.13,p=0.42398534 GPER,FC=-2.41,p=7.44e-38 GPER,FC=-1.76,p=3.63e-19 MICALL2,FC=0.58,p=7.47e-10 INTS1,FC=-0.01,p=0.896903598 INTS1,FC=0.76,p=1.18e-07 MAFK,FC=2.08,p=1.01e-28 MAD1L1,FC=1.30,p=6.23e-19 FTSJ2,FC=0.79,p=2.77e-18 FTSJ2,FC=0.38,p=2.34e-10 NUDT1,FC=1.59,p=3.09e-13 EIF3B,FC=0.55,p=3.64e-16 EIF3B,FC=0.89,p=5.11e-24 EIF3B,FC=0.50,p=2.7e-13 CHST12,FC=0.44,p=4.63e-08 LFNG,FC=0.15,p=0.268509765 IQCE,FC=0.56,p=1e-07 IQCE,FC=0.23,p=0.001103409 GNA12,FC=0.00,p=0.959765042 C9orf68,FC=-0.23,p=0.135437153 KIAA0415,FC=0.62,p=8.61e-12 WIPI2,FC=0.24,p=1.3e-05 WIPI2,FC=0.33,p=7.69e-10 WIPI2,FC=-0.53,p=8.7e-17 FBXL18,FC=0.21,p=0.004189807 FBXL18,FC=-0.04,p=0.680905811 FSCN1,FC=0.36,p=0.047185475 FSCN1,FC=1.35,p=1.11e-18 RNF216,FC=-0.07,p=0.180657922 RNF216,FC=0.27,p=1.18e-05 EVC,FC=-0.46,p=0.011048779 AIMP2,FC=0.37,p=1.28e-10 AIMP2,FC=0.51,p=1.19e-16 AIMP2,FC=0.35,p=5.68e-10 EIF2AK1,FC=0.62,p=5.55e-25 CYTH3,FC=1.83,p=4.99e-17 RAC1,FC=-0.12,p=0.008250935 KDELR2,FC=1.07,p=6.83e-44 KDELR2,FC=1.40,p=1.69e-47 KDELR2,FC=0.38,p=6.78e-08 ZDHHC4,FC=0.39,p=1.48e-05 C7orf26,FC=-0.33,p=1.43e-16 C7orf26,FC=0.05,p=0.585189718 ZNF12,FC=0.17,p=0.036349655 C7orf28B,FC=1.41,p=8.08e-21 C1GALT1,FC=0.91,p=7.18e-17

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    Array CGH Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

RP11-449P15, 26/50, 0.52 RP11-449P15, 8/50, 0.16 RP11-510K8, 20/50, 0.4 RP11-510K8, 7/50, 0.14 RP4-607J2, 23/50, 0.46 RP4-607J2, 3/50, 0.06 RP11-106E3, 20/50, 0.4 RP11-106E3, 1/50, 0.02 RP11-172O13, 27/50, 0.54 RP11-172O13, 2/50, 0.04 RP1-42M2, 21/50, 0.42 RP1-42M2, 5/50, 0.1 RP4-810E6, 18/50, 0.36 RP4-810E6, 3/50, 0.06 RP11-425P5, 21/50, 0.42 RP11-425P5, 2/50, 0.04 RP4-733B9, 5/50, 0.1 RP4-733B9, 5/50, 0.1

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    CGH Minimal Deletion Region Data        (help)      Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

PMID=11391799 PMID=14581340 PMID=16322280 PMID=9591638

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    LOH Frequency Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.

D7S531, 3/20, 15% PMID=10987304 D7S517, 1/18, 6% D7S3056, 7/10, 70% PMID=15900585 D7S3056, 2/8, 25%

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