IGDB.NSCLC Chromosome View

Chromosome 7
7p22 7p21 7p15 7p14 7p13 7p12 7p11 7q11 7q21 7q22 7q31 7q32 7q33 7q34 7q35 7q36         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Move   
-
        
   Zoom

    Lung Cancer Genes with Experimental Evidence         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: up-regulation / green : down-regulation / gray : mutation)

EPO, up, 33/158(21%) STAG3, 100.00%, 1/1 EPHB4, 1.49%, 3/202 PIK3CG, 2.65%, 5/189

(Click the gene to hyperlink to gene view.)    

    Gene Expression Microarray Data         (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        HG_U95 (Meyerson, GSE2514)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      NPTX2,FC=1.03,p=0.000139144 TRRAP,FC=0.22,p=0.015804639 SMURF1,FC=-0.00,p=0.990415446 ARPC1A,FC=-0.03,p=0.757725614 PDAP1,FC=0.19,p=0.099993703 PDAP1,FC=0.28,p=9.16e-08 PDAP1,FC=0.19,p=0.055938886 BUD31,FC=0.00,p=0.963388939 CPSF4,FC=0.27,p=1.89e-05 ATP5J2,FC=0.42,p=8.22e-07 ZKSCAN5,FC=0.22,p=0.078478907 AZGP1,FC=0.08,p=0.865154028 ZKSCAN1,FC=0.41,p=0.000118177 ZKSCAN1,FC=0.07,p=0.663803739 ZNF3,FC=0.21,p=0.20632465 COPS6,FC=0.19,p=0.006627161 MCM7,FC=0.61,p=8.45e-08 AP4M1,FC=-0.23,p=0.248808803 TAF6,FC=0.50,p=7.6e-09 PMS2L1,FC=0.59,p=3.1e-09 TSC22D4,FC=0.24,p=0.002014737 AGFG2,FC=-0.10,p=0.387722087 AGFG2,FC=0.31,p=0.00024681 AGFG2,FC=0.22,p=0.062942336 LRCH4,FC=0.24,p=0.004780572 PCOLCE,FC=0.20,p=0.122214048 TFR2,FC=0.38,p=0.021090357 ACTL6B,FC=0.35,p=0.025799149 GNB2,FC=-0.12,p=0.091619177 GNB2,FC=0.09,p=0.675422824 POP7,FC=0.28,p=0.129087118 EPO,FC=0.19,p=0.03282124 EPHB4,FC=-0.04,p=0.683201534 TRIP6,FC=0.30,p=0.000619899 ACHE,FC=0.60,p=7.67e-09 ACHE,FC=0.80,p=0.00042562 SERPINE1,FC=0.20,p=0.37579657 SERPINE1,FC=-0.08,p=0.73958954 AP1S1,FC=1.17,p=1.08e-09 VGF,FC=0.52,p=0.013892914 PLOD3,FC=0.16,p=0.029448222 ZNHIT1,FC=0.34,p=6e-08 CUX1,FC=-0.20,p=0.050811511 CUX1,FC=0.11,p=0.222847484 SH2B2,FC=0.18,p=0.18767765 ORAI2,FC=0.17,p=0.45290498 POLR2J,FC=0.43,p=1.08e-08 POLR2J,FC=0.10,p=0.210888474 LRRC17,FC=0.11,p=0.65545095 DPY19L2P2,FC=0.15,p=0.487423078 PMPCB,FC=0.38,p=0.059454439 DNAJC2,FC=0.36,p=0.080656255 PSMC2,FC=0.03,p=0.694409113 RELN,FC=0.00,p=0.983375518 ORC5L,FC=0.24,p=0.017100646 SRPK2,FC=0.28,p=0.023750408 SRPK2,FC=0.19,p=0.194504171 ATXN7L1,FC=0.36,p=9.83e-05 SYPL1,FC=-0.38,p=0.000620749 NAMPT,FC=-0.23,p=0.272832758 PIK3CG,FC=-0.23,p=0.13366825 PRKAR2B,FC=-0.35,p=0.02549892 HBP1,FC=-0.46,p=3.36e-08 COG5,FC=0.11,p=0.365469351 DUS4L,FC=0.32,p=0.064505126 BCAP29,FC=0.19,p=0.341097596 BCAP29,FC=0.23,p=0.153012784 BCAP29,FC=0.03,p=0.829991359 SLC26A4,FC=0.22,p=0.432851202 SLC26A3,FC=0.27,p=0.348358172

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      NPTX2,FC=0.86,p=0.039584264 TRRAP,FC=0.37,p=9.19e-05 SMURF1,FC=0.15,p=0.611225982 ARPC1A,FC=0.25,p=0.033822923 PDAP1,FC=0.79,p=1.45e-09 PDAP1,FC=0.40,p=2.48e-07 PDAP1,FC=0.74,p=1.66e-09 BUD31,FC=0.19,p=0.076112362 CPSF4,FC=0.58,p=5.69e-09 ATP5J2,FC=0.69,p=1.34e-09 ZKSCAN5,FC=0.21,p=0.259747684 AZGP1,FC=-1.18,p=0.038639171 ZKSCAN1,FC=0.82,p=9.11e-10 ZKSCAN1,FC=0.55,p=0.021510025 ZNF3,FC=0.39,p=0.081701248 COPS6,FC=0.49,p=5.35e-06 MCM7,FC=1.37,p=2.96e-21 AP4M1,FC=-0.22,p=0.369821288 TAF6,FC=0.68,p=4.46e-09 PMS2L1,FC=0.91,p=1.74e-08 TSC22D4,FC=0.31,p=0.003071093 AGFG2,FC=-0.35,p=0.020409224 AGFG2,FC=0.49,p=5.58e-05 AGFG2,FC=0.31,p=0.053764736 LRCH4,FC=0.32,p=0.00928408 PCOLCE,FC=0.15,p=0.29118282 TFR2,FC=0.40,p=0.068096879 ACTL6B,FC=0.19,p=0.373273476 GNB2,FC=0.06,p=0.488064743 GNB2,FC=0.60,p=0.011741089 POP7,FC=0.57,p=0.005039634 EPO,FC=0.05,p=0.669861995 EPHB4,FC=-0.22,p=0.055828462 TRIP6,FC=0.43,p=5.97e-06 ACHE,FC=0.72,p=4.94e-07 ACHE,FC=-0.22,p=0.281344619 SERPINE1,FC=0.39,p=0.240220912 SERPINE1,FC=0.13,p=0.704433681 AP1S1,FC=1.52,p=2e-08 VGF,FC=0.12,p=0.540124721 PLOD3,FC=0.13,p=0.152531759 ZNHIT1,FC=0.19,p=0.016243057 CUX1,FC=-0.33,p=0.014126696 CUX1,FC=0.47,p=0.00020959 SH2B2,FC=-0.16,p=0.368586601 ORAI2,FC=-0.52,p=0.087786246 POLR2J,FC=0.58,p=2.15e-10 POLR2J,FC=0.19,p=0.035571211 LRRC17,FC=0.23,p=0.478849432 DPY19L2P2,FC=0.55,p=0.046915446 PMPCB,FC=0.43,p=0.134020755 DNAJC2,FC=0.24,p=0.408191158 PSMC2,FC=0.13,p=0.253421939 RELN,FC=-0.16,p=0.414224014 ORC5L,FC=0.46,p=0.002147614 SRPK2,FC=0.49,p=0.00122128 SRPK2,FC=0.45,p=0.029132783 ATXN7L1,FC=0.52,p=0.000120672 SYPL1,FC=0.21,p=0.137582545 NAMPT,FC=-0.53,p=0.050423827 PIK3CG,FC=-0.12,p=0.561757117 PRKAR2B,FC=-0.48,p=0.030341477 HBP1,FC=-0.55,p=3.64e-07 COG5,FC=-0.04,p=0.753877271 DUS4L,FC=0.06,p=0.788925689 BCAP29,FC=-0.12,p=0.656965169 BCAP29,FC=0.33,p=0.059481324 BCAP29,FC=-0.30,p=0.081570718 SLC26A4,FC=-0.02,p=0.950232147 SLC26A3,FC=0.16,p=0.652105387


        HG_U133A (GSE7670, GSE17475, DCLungStudy, GSE4573, GSE10072)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      NPTX2,FC=0.91,p=2.73e-06 TRRAP,FC=0.71,p=3.22e-19 TRRAP,FC=0.47,p=7.44e-13 SMURF1,FC=0.30,p=3.27e-07 SMURF1,FC=0.55,p=1.37e-10 SMURF1,FC=0.82,p=1.85e-08 ARPC1A,FC=0.47,p=5.02e-09 ARPC1B,FC=0.38,p=1.21e-08 PDAP1,FC=0.46,p=0.001886677 PDAP1,FC=1.40,p=4.37e-49 BUD31,FC=0.37,p=1.26e-09 CPSF4,FC=0.17,p=0.004022836 ATP5J2,FC=0.28,p=1.05e-06 ATP5J2,FC=0.74,p=6.02e-40 ZNF394,FC=0.18,p=0.015893676 ZKSCAN5,FC=0.19,p=0.002406934 ZKSCAN5,FC=-0.00,p=0.987710716 CYP3A43,FC=-0.35,p=0.006884928 CYP3A43,FC=-0.15,p=0.307428274 CYP3A43,FC=-0.64,p=3.66e-18 CYP3A43,FC=-0.55,p=0.00011075 AZGP1,FC=0.37,p=0.170543304 ZKSCAN1,FC=0.65,p=1.29e-10 ZKSCAN1,FC=0.25,p=0.002661073 ZNF3,FC=-0.29,p=0.023679776 ZNF3,FC=-0.69,p=4.35e-08 ZNF3,FC=0.60,p=8.32e-11 COPS6,FC=0.43,p=4.16e-13 COPS6,FC=0.07,p=0.166272759 MCM7,FC=0.90,p=1.87e-22 AP4M1,FC=0.84,p=2.87e-14 TAF6,FC=0.58,p=2.51e-20 CNPY4,FC=-0.37,p=0.010824379 C7orf43,FC=0.59,p=9.19e-07 GAL3ST4,FC=0.10,p=0.18686523 STAG3,FC=0.27,p=0.02176104 PVRIG,FC=-0.04,p=0.617190449 PMS2L1,FC=0.58,p=1.04e-30 PMS2L1,FC=0.34,p=8.33e-12 PMS2L1,FC=0.31,p=1.29e-09 PMS2L1,FC=0.68,p=8.9e-32 PILRB,FC=0.49,p=7.68e-06 PILRA,FC=-0.60,p=1.77e-07 PILRA,FC=-0.88,p=1.84e-18 ZCWPW1,FC=-0.17,p=0.194213654 MEPCE,FC=-0.36,p=1.04e-11 TSC22D4,FC=0.39,p=6.72e-09 AGFG2,FC=0.41,p=2.26e-05 LRCH4,FC=-0.22,p=0.00051848 LRCH4,FC=0.20,p=0.044800207 LRCH4,FC=0.11,p=0.334670179 FBXO24,FC=0.71,p=2.48e-06 PCOLCE,FC=0.32,p=0.004985867 MOSPD3,FC=0.38,p=1.09e-11 TFR2,FC=1.41,p=1.59e-16 TFR2,FC=0.34,p=0.001189442 TFR2,FC=1.36,p=7.74e-25 ACTL6B,FC=-0.35,p=0.01552561 ACTL6B,FC=-0.13,p=0.215229882 ACTL6B,FC=-0.24,p=0.00045918 GNB2,FC=0.13,p=0.060184739 POP7,FC=0.62,p=1.06e-16 EPO,FC=-0.05,p=0.694431869 EPO,FC=0.47,p=6.35e-05 EPHB4,FC=0.17,p=0.030170894 EPHB4,FC=-0.90,p=1.1e-24 SLC12A9,FC=0.16,p=0.003538254 TRIP6,FC=0.33,p=0.00194095 SRRT,FC=0.15,p=0.000702036 SRRT,FC=0.39,p=1.62e-08 SRRT,FC=2.16,p=8.14e-43 SRRT,FC=0.26,p=2.54e-08 ACHE,FC=0.67,p=8.46e-05 ACHE,FC=0.70,p=0.000569098 SERPINE1,FC=-0.26,p=0.114300726 SERPINE1,FC=0.18,p=0.193606775 AP1S1,FC=0.74,p=9.71e-21 AP1S1,FC=1.38,p=7.59e-34 AP1S1,FC=2.27,p=9.23e-43 VGF,FC=1.14,p=2.6e-32 PLOD3,FC=0.07,p=0.189581632 ZNHIT1,FC=0.61,p=7.87e-18 CLDN15,FC=0.04,p=0.743599686 FIS1,FC=-0.15,p=0.008810269 RABL5,FC=0.10,p=0.528884364 MYL10,FC=-0.24,p=0.089659277 MYL10,FC=0.28,p=0.01494976 CUX1,FC=0.10,p=0.146767347 CUX1,FC=-0.18,p=0.002069547 SH2B2,FC=0.00,p=0.984902112 PRKRIP1,FC=0.46,p=7.49e-07 ORAI2,FC=0.36,p=4.77e-07 ORAI2,FC=0.56,p=1.43e-12 ALKBH4,FC=0.69,p=1.61e-16 POLR2J,FC=0.80,p=4.05e-09 POLR2J,FC=0.96,p=2.11e-39 POLR2J2,FC=0.86,p=1.37e-32 LRRC17,FC=-0.04,p=0.660653357 DPY19L2P2,FC=-0.32,p=0.004201332 PMPCB,FC=0.22,p=0.000384418 DNAJC2,FC=0.56,p=7.28e-12 PSMC2,FC=0.29,p=1.52e-07 PSMC2,FC=-0.64,p=5.41e-11 RELN,FC=-0.70,p=1.28e-12 ORC5L,FC=0.79,p=2.11e-23 ORC5L,FC=0.48,p=1.03e-14 ORC5L,FC=-0.44,p=0.026851842 SRPK2,FC=0.07,p=0.575304238 SRPK2,FC=0.18,p=0.001574668 SRPK2,FC=-0.06,p=0.445442119 SRPK2,FC=0.29,p=1.55e-06 PUS7,FC=0.85,p=5.19e-30 RINT1,FC=0.56,p=5.82e-19 ATXN7L1,FC=0.23,p=0.036063558 ATXN7L1,FC=0.12,p=0.368548825 SYPL1,FC=0.06,p=0.260052302 SYPL1,FC=0.37,p=1.23e-05 NAMPT,FC=-0.16,p=0.148234262 PIK3CG,FC=0.53,p=0.003031043 PIK3CG,FC=0.19,p=0.083034009 PRKAR2B,FC=-0.56,p=9.36e-06 HBP1,FC=-0.40,p=2.65e-15 HBP1,FC=0.35,p=0.000790657 COG5,FC=0.47,p=8.28e-11 COG5,FC=0.09,p=0.180909155 GPR22,FC=-0.35,p=0.015595746 DUS4L,FC=0.92,p=8.86e-11 DUS4L,FC=0.77,p=2.21e-18 BCAP29,FC=0.44,p=1.01e-06 BCAP29,FC=-0.12,p=0.228614752 BCAP29,FC=0.35,p=6.58e-05 SLC26A4,FC=0.09,p=0.556106238 CBLL1,FC=0.06,p=0.564600537 SLC26A3,FC=0.08,p=0.67090386 SLC26A3,FC=-0.20,p=0.173420902

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      NPTX2,FC=2.46,p=4.77e-52 TRRAP,FC=-0.26,p=0.033728192 TRRAP,FC=0.16,p=0.033493219 SMURF1,FC=0.61,p=1.28e-17 SMURF1,FC=4.09,p=2.5e-55 SMURF1,FC=4.91,p=2.98e-118 ARPC1A,FC=-3.29,p=7.72e-152 ARPC1B,FC=-1.59,p=1.61e-67 PDAP1,FC=4.92,p=3.75e-101 PDAP1,FC=0.99,p=1.42e-16 BUD31,FC=-2.20,p=5.55e-58 CPSF4,FC=-4.76,p=2.91e-126 ATP5J2,FC=-1.83,p=3.15e-27 ATP5J2,FC=-1.65,p=1.13e-37 ZNF394,FC=-3.32,p=1.31e-76 ZKSCAN5,FC=1.05,p=9.3e-29 ZKSCAN5,FC=2.23,p=3.13e-89 CYP3A43,FC=0.67,p=1.1e-05 CYP3A43,FC=0.76,p=3.15e-06 CYP3A43,FC=-1.33,p=5.71e-31 CYP3A43,FC=0.16,p=0.274760915 AZGP1,FC=6.49,p=4.63e-145 ZKSCAN1,FC=2.76,p=5.57e-83 ZKSCAN1,FC=-5.21,p=7.46e-158 ZNF3,FC=2.26,p=5.94e-42 ZNF3,FC=3.18,p=1.03e-79 ZNF3,FC=3.54,p=6.48e-54 COPS6,FC=-1.43,p=3.54e-50 COPS6,FC=-4.85,p=3e-118 MCM7,FC=-1.01,p=8.55e-20 AP4M1,FC=3.28,p=1.26e-70 TAF6,FC=-5.78,p=1.2e-135 CNPY4,FC=1.25,p=4.25e-18 C7orf43,FC=-0.88,p=1.35e-09 GAL3ST4,FC=0.35,p=0.000334209 STAG3,FC=1.11,p=1.1e-25 PVRIG,FC=-0.24,p=0.003366359 PMS2L1,FC=-0.42,p=3.45e-11 PMS2L1,FC=-4.83,p=1.64e-89 PMS2L1,FC=-1.05,p=1.41e-52 PMS2L1,FC=-1.29,p=3.58e-40 PILRB,FC=-2.69,p=2.35e-18 PILRA,FC=2.01,p=7.92e-65 PILRA,FC=-0.47,p=7.97e-08 ZCWPW1,FC=-0.05,p=0.662546569 MEPCE,FC=-3.12,p=1.69e-69 TSC22D4,FC=-0.90,p=3.11e-14 AGFG2,FC=1.37,p=1.16e-32 LRCH4,FC=-4.25,p=2.34e-83 LRCH4,FC=1.68,p=1.2e-47 LRCH4,FC=5.44,p=7.71e-113 FBXO24,FC=0.92,p=3.35e-08 PCOLCE,FC=0.88,p=7.41e-18 MOSPD3,FC=-0.97,p=2.73e-16 TFR2,FC=5.62,p=5.77e-121 TFR2,FC=1.28,p=2.81e-21 TFR2,FC=3.67,p=1.24e-80 ACTL6B,FC=2.78,p=1.68e-61 ACTL6B,FC=2.07,p=4.54e-29 ACTL6B,FC=6.29,p=1.48e-180 GNB2,FC=-5.00,p=1.18e-72 POP7,FC=-1.15,p=9.89e-24 EPO,FC=2.72,p=1.47e-46 EPO,FC=0.90,p=1.53e-09 EPHB4,FC=-3.92,p=2.7e-106 EPHB4,FC=-0.44,p=5.49e-05 SLC12A9,FC=-1.80,p=2.55e-31 TRIP6,FC=-2.49,p=3.25e-77 SRRT,FC=-0.96,p=1.17e-34 SRRT,FC=2.55,p=8.01e-79 SRRT,FC=5.33,p=5.68e-105 SRRT,FC=-1.02,p=4.27e-46 ACHE,FC=4.14,p=2.5e-123 ACHE,FC=2.87,p=6.07e-58 SERPINE1,FC=1.53,p=4.68e-16 SERPINE1,FC=1.23,p=4.9e-11 AP1S1,FC=1.63,p=2.52e-52 AP1S1,FC=0.98,p=4.78e-08 AP1S1,FC=4.85,p=5.22e-76 VGF,FC=0.88,p=2.29e-09 PLOD3,FC=-1.25,p=6.21e-38 ZNHIT1,FC=2.36,p=7.77e-92 CLDN15,FC=1.14,p=2e-19 FIS1,FC=-6.60,p=1.56e-117 RABL5,FC=3.25,p=1.36e-58 MYL10,FC=-3.47,p=4.08e-52 MYL10,FC=-3.09,p=1.58e-69 CUX1,FC=-0.95,p=2.57e-25 CUX1,FC=-6.88,p=5.98e-135 SH2B2,FC=-3.24,p=4.11e-56 PRKRIP1,FC=1.77,p=1.36e-42 ORAI2,FC=3.82,p=9.81e-132 ORAI2,FC=3.39,p=2.15e-88 ALKBH4,FC=0.16,p=0.222201426 POLR2J,FC=2.67,p=1.71e-57 POLR2J,FC=-1.52,p=1.12e-57 POLR2J2,FC=-1.18,p=1.63e-38 LRRC17,FC=-0.34,p=6.29e-06 DPY19L2P2,FC=2.29,p=3.5e-29 PMPCB,FC=3.02,p=2.6e-79 DNAJC2,FC=-2.35,p=7.34e-52 PSMC2,FC=-4.45,p=7.8e-120 PSMC2,FC=-3.12,p=1.49e-97 RELN,FC=1.12,p=1.97e-26 ORC5L,FC=3.12,p=1.65e-86 ORC5L,FC=0.78,p=3.56e-17 ORC5L,FC=10.26,p=2.05e-145 SRPK2,FC=-0.04,p=0.783610207 SRPK2,FC=-0.39,p=0.199422956 SRPK2,FC=-1.20,p=2.7e-31 SRPK2,FC=0.03,p=0.683476516 PUS7,FC=0.55,p=4.76e-22 RINT1,FC=1.34,p=4.85e-47 ATXN7L1,FC=8.36,p=2.7e-185 ATXN7L1,FC=1.21,p=1.13e-09 SYPL1,FC=-1.43,p=1.61e-64 SYPL1,FC=2.81,p=6.03e-108 NAMPT,FC=-2.19,p=6.56e-55 PIK3CG,FC=1.92,p=2.29e-14 PIK3CG,FC=3.99,p=5.27e-54 PRKAR2B,FC=1.28,p=2.02e-31 HBP1,FC=-3.85,p=1.41e-129 HBP1,FC=2.24,p=1.01e-48 COG5,FC=-0.82,p=7.21e-14 COG5,FC=1.37,p=1.84e-59 GPR22,FC=1.89,p=5.73e-28 DUS4L,FC=0.95,p=6.56e-08 DUS4L,FC=-2.18,p=3.15e-33 BCAP29,FC=1.47,p=3.12e-33 BCAP29,FC=0.67,p=4.15e-11 BCAP29,FC=0.57,p=2.27e-08 SLC26A4,FC=3.56,p=1.8e-90 CBLL1,FC=0.57,p=0.001805231 SLC26A3,FC=3.41,p=1.39e-43 SLC26A3,FC=4.93,p=1.82e-87


        HG_U133_Plus2 (GSE3141, GSE10245, GSE10445, GSE12667, GSE10799, GSE16538, GSE7307, GSE3526)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      NPTX2,FC=0.93,p=7.81e-05 TMEM130,FC=-1.59,p=4.97e-10 CDC14B,FC=-0.23,p=0.346808882 TRRAP,FC=0.51,p=0.000530021 TRRAP,FC=0.52,p=5.31e-11 SMURF1,FC=0.08,p=0.332769995 SMURF1,FC=1.32,p=2.69e-10 SMURF1,FC=0.85,p=1.2e-10 MYH16,FC=-0.22,p=0.310903246 ARPC1A,FC=0.90,p=6.12e-18 ARPC1B,FC=0.24,p=0.004116099 PDAP1,FC=0.33,p=0.131474981 PDAP1,FC=0.35,p=0.012049737 BUD31,FC=0.17,p=0.011169378 CPSF4,FC=0.45,p=8.64e-07 ATP5J2,FC=0.56,p=6.2e-08 ATP5J2,FC=0.49,p=1.9e-13 ATP5J2,FC=0.05,p=0.739656484 ZNF789,FC=1.36,p=2.74e-15 ZNF789,FC=0.54,p=0.000163169 ZNF789,FC=-0.11,p=0.25509026 ZNF789,FC=0.10,p=0.428733277 ZNF394,FC=-0.59,p=8.92e-12 ZKSCAN5,FC=0.10,p=0.169670002 ZKSCAN5,FC=0.39,p=2.13e-05 C7orf38,FC=0.14,p=0.551706606 C7orf38,FC=0.32,p=0.001694287 ZNF655,FC=-0.59,p=4.52e-12 ZNF655,FC=0.26,p=0.012056606 ZNF655,FC=0.04,p=0.852789967 ZNF498,FC=0.32,p=0.075510687 ZNF498,FC=0.51,p=4.54e-06 ZNF498,FC=0.01,p=0.922349204 CYP3A43,FC=-0.11,p=0.483902273 CYP3A43,FC=-0.14,p=0.48722795 CYP3A43,FC=-0.54,p=0.004768407 CYP3A43,FC=-0.35,p=0.087291217 TRIM4,FC=-0.03,p=0.738561182 TRIM4,FC=-0.02,p=0.885798856 TRIM4,FC=0.66,p=2.77e-05 AZGP1,FC=-0.68,p=0.033629519 ZKSCAN1,FC=-0.07,p=0.575641714 ZKSCAN1,FC=-0.24,p=0.039069496 ZKSCAN1,FC=-0.00,p=0.990055038 ZSCAN21,FC=0.05,p=0.562592458 ZNF3,FC=0.33,p=0.066003222 ZNF3,FC=0.49,p=0.000252669 ZNF3,FC=-0.13,p=0.510397759 ZNF3,FC=-0.05,p=0.781928169 COPS6,FC=0.49,p=8.8e-12 COPS6,FC=0.45,p=7.89e-09 MCM7,FC=1.02,p=2.61e-16 AP4M1,FC=0.46,p=0.000874493 TAF6,FC=0.98,p=2.53e-21 CNPY4,FC=0.34,p=0.035390266 CNPY4,FC=0.16,p=0.028083828 MBLAC1,FC=0.32,p=0.005827375 C7orf59,FC=0.07,p=0.411100415 C7orf43,FC=0.52,p=6.2e-05 GAL3ST4,FC=0.59,p=6.29e-09 GPC2,FC=1.09,p=4.22e-10 STAG3,FC=0.31,p=0.037348336 GATS,FC=0.02,p=0.853608327 PVRIG,FC=-0.32,p=0.0331617 PMS2L1,FC=0.77,p=6.26e-23 PMS2L1,FC=0.83,p=1.22e-25 PMS2L1,FC=0.78,p=1.2e-19 PMS2L1,FC=0.93,p=4.3e-26 PILRB,FC=0.37,p=0.011149115 PILRB,FC=0.31,p=0.011931153 PILRA,FC=-1.03,p=6.95e-14 PILRA,FC=-1.25,p=1.88e-25 ZCWPW1,FC=-1.24,p=1.1e-08 ZCWPW1,FC=-0.54,p=0.001393123 MEPCE,FC=-0.02,p=0.810460947 C7orf47,FC=0.89,p=8.15e-27 C7orf61,FC=0.32,p=0.067385325 TSC22D4,FC=0.08,p=0.546280809 TSC22D4,FC=0.06,p=0.664858492 C7orf51,FC=0.02,p=0.894111145 AGFG2,FC=0.64,p=0.002843188 AGFG2,FC=0.69,p=0.000112419 LRCH4,FC=0.49,p=0.00090479 LRCH4,FC=-0.39,p=0.014458591 LRCH4,FC=0.05,p=0.565515548 FBXO24,FC=0.56,p=0.001937255 FBXO24,FC=-0.18,p=0.267202398 PCOLCE,FC=0.25,p=0.078543848 MOSPD3,FC=0.68,p=1.63e-12 TFR2,FC=-0.48,p=0.001469095 TFR2,FC=1.52,p=9.58e-13 TFR2,FC=0.46,p=0.001288209 ACTL6B,FC=0.15,p=0.428647394 ACTL6B,FC=0.07,p=0.357294847 ACTL6B,FC=-0.02,p=0.927827209 GNB2,FC=0.22,p=0.007089487 GIGYF1,FC=0.73,p=6.52e-07 GIGYF1,FC=0.75,p=9.64e-06 POP7,FC=0.66,p=4.15e-13 EPO,FC=0.34,p=0.031742327 EPO,FC=0.26,p=0.188114136 ZAN,FC=-0.05,p=0.676360615 ZAN,FC=-0.18,p=0.059667602 ZAN,FC=-0.30,p=0.00912325 ZAN,FC=0.10,p=0.556386061 ZAN,FC=-0.18,p=0.014585887 EPHB4,FC=0.23,p=0.009073851 EPHB4,FC=1.17,p=1.25e-06 SLC12A9,FC=0.70,p=3.09e-05 SLC12A9,FC=-0.03,p=0.82680634 SLC12A9,FC=0.23,p=0.005014415 TRIP6,FC=0.33,p=0.001859453 SRRT,FC=0.47,p=3.94e-11 SRRT,FC=0.88,p=1.16e-05 SRRT,FC=0.17,p=0.205373273 SRRT,FC=0.35,p=7.9e-08 UFSP1,FC=0.79,p=0.000237521 ACHE,FC=0.67,p=0.001911667 ACHE,FC=0.77,p=0.005098552 MUC12,FC=-0.24,p=0.190551117 MUC17,FC=0.07,p=0.725326926 TRIM56,FC=-0.36,p=5.76e-06 SERPINE1,FC=-0.72,p=0.000775483 SERPINE1,FC=-1.17,p=5.18e-08 SERPINE1,FC=-0.70,p=0.000574965 AP1S1,FC=1.59,p=1.02e-15 AP1S1,FC=1.65,p=6.51e-16 AP1S1,FC=1.63,p=4.74e-36 VGF,FC=0.38,p=0.042978872 C7orf52,FC=0.45,p=0.007064225 C7orf52,FC=-0.38,p=0.008435819 MOGAT3,FC=0.78,p=0.000246617 PLOD3,FC=0.47,p=8.08e-08 ZNHIT1,FC=0.38,p=1.05e-06 CLDN15,FC=-0.31,p=0.098827761 CLDN15,FC=0.12,p=0.279960186 FIS1,FC=-0.25,p=0.004277038 RABL5,FC=0.38,p=1.67e-08 RABL5,FC=-0.04,p=0.699486707 EMID2,FC=-0.04,p=0.692970893 EMID2,FC=0.08,p=0.611951572 MYL10,FC=0.38,p=0.033968973 MYL10,FC=0.27,p=0.169011945 CUX1,FC=-0.38,p=0.005146373 CUX1,FC=-0.26,p=0.001328965 CUX1,FC=-0.02,p=0.765322957 CUX1,FC=-0.06,p=0.542988892 CUX1,FC=0.01,p=0.861732929 SH2B2,FC=0.56,p=2.37e-08 PRKRIP1,FC=0.98,p=8.14e-15 PRKRIP1,FC=0.38,p=2.97e-07 PRKRIP1,FC=0.27,p=0.088719699 PRKRIP1,FC=0.33,p=1.35e-05 ORAI2,FC=0.32,p=0.001571744 ORAI2,FC=0.31,p=0.001297892 ORAI2,FC=0.64,p=0.000201027 ALKBH4,FC=0.37,p=1.1e-05 LRWD1,FC=0.24,p=0.007636836 POLR2J,FC=0.62,p=1.23e-11 POLR2J,FC=0.08,p=0.636187418 POLR2J2,FC=0.83,p=4.52e-12 FAM185A,FC=0.35,p=0.049893398 FBXL13,FC=-0.02,p=0.890863508 FBXL13,FC=0.49,p=0.006398539 LRRC17,FC=-0.03,p=0.841445322 LRRC17,FC=0.15,p=0.450262849 ARMC10,FC=0.68,p=2.73e-09 NAPEPLD,FC=0.33,p=0.00635972 NAPEPLD,FC=0.45,p=2.2e-07 NAPEPLD,FC=0.45,p=1.73e-05 NAPEPLD,FC=0.53,p=1.36e-06 NAPEPLD,FC=0.36,p=0.020305919 NAPEPLD,FC=0.57,p=1.86e-05 DPY19L2P2,FC=-0.35,p=0.057609967 PMPCB,FC=-0.20,p=0.013144126 DNAJC2,FC=-0.17,p=0.433632764 DNAJC2,FC=0.07,p=0.372773634 PSMC2,FC=-0.67,p=5.91e-13 PSMC2,FC=-0.55,p=4.92e-06 PSMC2,FC=0.27,p=0.000437858 RELN,FC=-0.55,p=0.00047987 RELN,FC=0.29,p=0.181041596 ORC5L,FC=0.11,p=0.527371267 ORC5L,FC=0.69,p=3.16e-07 ORC5L,FC=0.53,p=3.32e-09 ORC5L,FC=0.48,p=0.034876693 LHFPL3,FC=0.05,p=0.789087342 MLL5,FC=-0.75,p=5.7e-18 MLL5,FC=-0.17,p=0.04588932 MLL5,FC=-0.60,p=4.91e-08 SRPK2,FC=0.46,p=3.19e-11 SRPK2,FC=0.33,p=0.024891338 SRPK2,FC=-0.07,p=0.506357615 SRPK2,FC=0.40,p=0.000405839 SRPK2,FC=0.44,p=5.57e-09 SRPK2,FC=0.52,p=5.23e-07 PUS7,FC=0.63,p=7.73e-11 RINT1,FC=0.42,p=2.13e-06 ATXN7L1,FC=0.69,p=0.001799922 ATXN7L1,FC=-0.02,p=0.895159307 FLJ23834,FC=-1.76,p=3.94e-15 SYPL1,FC=0.28,p=0.046518969 SYPL1,FC=0.30,p=5.96e-05 NAMPT,FC=-0.91,p=2.51e-12 NAMPT,FC=2.26,p=3.44e-07 FLJ36031,FC=0.09,p=0.370115297 FLJ36031,FC=0.38,p=0.067789602 PIK3CG,FC=-0.79,p=0.000287439 PIK3CG,FC=-0.67,p=5.25e-05 PRKAR2B,FC=-0.77,p=9e-07 HBP1,FC=-0.10,p=0.469178408 HBP1,FC=0.02,p=0.939880018 HBP1,FC=-0.26,p=1.18e-05 COG5,FC=0.22,p=0.006226234 COG5,FC=-0.20,p=0.028230673 COG5,FC=0.62,p=3.53e-21 GPR22,FC=-0.05,p=0.854743473 GPR22,FC=0.22,p=0.308911696 DUS4L,FC=0.28,p=0.070665611 DUS4L,FC=0.64,p=2.65e-07 BCAP29,FC=-0.61,p=1.13e-05 BCAP29,FC=-0.71,p=5.47e-18 BCAP29,FC=-0.19,p=0.01641761 BCAP29,FC=0.07,p=0.575487744 BCAP29,FC=-0.87,p=5.16e-12 BCAP29,FC=0.67,p=1.68e-05 LOC286002,FC=-0.42,p=0.069282806 SLC26A4,FC=-0.38,p=0.086786617 CBLL1,FC=-0.21,p=0.142849738 SLC26A3,FC=0.15,p=0.479200194 SLC26A3,FC=-0.05,p=0.858926473

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      NPTX2,FC=0.79,p=0.003395875 TMEM130,FC=-2.61,p=1.88e-20 CDC14B,FC=-0.94,p=0.00136034 TRRAP,FC=0.78,p=6.45e-07 TRRAP,FC=0.60,p=5.22e-11 SMURF1,FC=-0.02,p=0.844638692 SMURF1,FC=1.63,p=1.24e-10 SMURF1,FC=1.43,p=3.39e-19 MYH16,FC=-0.85,p=0.000747363 ARPC1A,FC=1.21,p=3.84e-25 ARPC1B,FC=-0.23,p=0.023207238 PDAP1,FC=0.05,p=0.84824856 PDAP1,FC=0.98,p=2.48e-12 BUD31,FC=0.51,p=9.76e-11 CPSF4,FC=0.95,p=3.07e-18 ATP5J2,FC=1.05,p=1.13e-18 ATP5J2,FC=0.54,p=7.17e-14 ATP5J2,FC=0.49,p=0.005032919 ZNF789,FC=1.22,p=1.33e-10 ZNF789,FC=-0.24,p=0.207459993 ZNF789,FC=-0.29,p=0.011667169 ZNF789,FC=-0.16,p=0.248111502 ZNF394,FC=-0.75,p=6.39e-11 ZKSCAN5,FC=0.37,p=1.06e-06 ZKSCAN5,FC=0.60,p=1.84e-07 C7orf38,FC=-0.52,p=0.03886382 C7orf38,FC=0.33,p=0.00199316 ZNF655,FC=-0.53,p=5.4e-08 ZNF655,FC=0.14,p=0.249888791 ZNF655,FC=-0.06,p=0.723985181 ZNF498,FC=1.03,p=3.08e-08 ZNF498,FC=0.98,p=1.96e-12 ZNF498,FC=0.07,p=0.396066482 CYP3A43,FC=0.17,p=0.32785149 CYP3A43,FC=-0.13,p=0.556430283 CYP3A43,FC=-0.77,p=7.62e-05 CYP3A43,FC=-0.29,p=0.217231256 TRIM4,FC=-0.17,p=0.092196968 TRIM4,FC=0.06,p=0.637431025 TRIM4,FC=1.42,p=5.85e-13 AZGP1,FC=-2.79,p=3.92e-18 ZKSCAN1,FC=0.04,p=0.72511322 ZKSCAN1,FC=-0.18,p=0.116625292 ZKSCAN1,FC=0.35,p=0.009160843 ZSCAN21,FC=0.19,p=0.024269398 ZNF3,FC=0.67,p=0.000774261 ZNF3,FC=0.53,p=7.62e-06 ZNF3,FC=-0.09,p=0.677826472 ZNF3,FC=0.44,p=0.011904094 COPS6,FC=0.73,p=5.91e-17 COPS6,FC=0.65,p=8.86e-12 MCM7,FC=1.83,p=3.72e-38 AP4M1,FC=-0.13,p=0.448405134 TAF6,FC=1.40,p=3.03e-23 CNPY4,FC=0.25,p=0.161687019 CNPY4,FC=0.32,p=3.66e-05 MBLAC1,FC=0.76,p=1.17e-09 C7orf59,FC=0.47,p=6.26e-06 C7orf43,FC=0.80,p=3.55e-09 GAL3ST4,FC=0.92,p=8.67e-14 GPC2,FC=1.63,p=2.17e-15 STAG3,FC=0.29,p=0.078922389 GATS,FC=0.13,p=0.375201451 PVRIG,FC=-0.36,p=0.032396017 PMS2L1,FC=1.16,p=2.08e-26 PMS2L1,FC=1.32,p=5.28e-30 PMS2L1,FC=1.27,p=8.41e-27 PMS2L1,FC=1.44,p=2.4e-30 PILRB,FC=1.06,p=1.32e-11 PILRB,FC=0.74,p=2.51e-08 PILRA,FC=-1.32,p=4.95e-15 PILRA,FC=-1.51,p=7.15e-27 ZCWPW1,FC=-1.69,p=2.28e-16 ZCWPW1,FC=-0.90,p=4.6e-07 MEPCE,FC=0.37,p=8.02e-05 C7orf47,FC=0.79,p=8.44e-16 C7orf61,FC=0.78,p=4.3e-07 TSC22D4,FC=0.03,p=0.735067734 TSC22D4,FC=0.56,p=5.67e-05 C7orf51,FC=0.32,p=0.106835326 AGFG2,FC=0.68,p=0.00600336 AGFG2,FC=0.98,p=6.53e-06 LRCH4,FC=0.55,p=0.00040879 LRCH4,FC=-0.27,p=0.118412044 LRCH4,FC=-0.25,p=0.004413863 FBXO24,FC=-0.30,p=0.136006593 FBXO24,FC=0.00,p=0.986580207 PCOLCE,FC=0.17,p=0.392375965 MOSPD3,FC=0.87,p=1.47e-09 TFR2,FC=-0.31,p=0.067290488 TFR2,FC=1.57,p=6.13e-10 TFR2,FC=0.53,p=0.002041248 ACTL6B,FC=0.31,p=0.146924185 ACTL6B,FC=0.23,p=0.001545394 ACTL6B,FC=-0.51,p=0.007619685 GNB2,FC=0.53,p=4.39e-07 GIGYF1,FC=1.54,p=1.81e-17 GIGYF1,FC=0.85,p=2.36e-05 POP7,FC=0.82,p=4.5e-14 EPO,FC=0.31,p=0.099923999 EPO,FC=0.42,p=0.052158569 ZAN,FC=-0.13,p=0.311059408 ZAN,FC=-0.10,p=0.328902236 ZAN,FC=-0.30,p=0.025442016 ZAN,FC=0.51,p=0.008396465 ZAN,FC=-0.17,p=0.0379906 EPHB4,FC=0.41,p=0.000100679 EPHB4,FC=1.78,p=5.76e-11 SLC12A9,FC=0.62,p=0.004569157 SLC12A9,FC=-0.19,p=0.125118027 SLC12A9,FC=0.51,p=9.98e-08 TRIP6,FC=0.73,p=1.15e-09 SRRT,FC=0.86,p=7.56e-19 SRRT,FC=1.49,p=1.88e-08 SRRT,FC=0.74,p=4.66e-06 SRRT,FC=0.66,p=9.24e-17 UFSP1,FC=0.24,p=0.311584186 ACHE,FC=-0.04,p=0.80727142 ACHE,FC=-0.82,p=5.76e-05 MUC12,FC=-0.55,p=0.000899922 MUC17,FC=0.37,p=0.031410722 TRIM56,FC=-0.60,p=6.17e-07 SERPINE1,FC=-0.65,p=0.004841194 SERPINE1,FC=-0.15,p=0.499651242 SERPINE1,FC=0.28,p=0.204881056 AP1S1,FC=1.64,p=4.53e-19 AP1S1,FC=1.71,p=3.06e-16 AP1S1,FC=1.82,p=2.18e-27 VGF,FC=0.96,p=1.4e-09 C7orf52,FC=0.94,p=1.11e-06 C7orf52,FC=-0.21,p=0.034983211 MOGAT3,FC=0.98,p=3.87e-05 PLOD3,FC=0.54,p=5.02e-07 ZNHIT1,FC=-0.03,p=0.741947167 CLDN15,FC=-0.35,p=0.052345278 CLDN15,FC=0.16,p=0.2074831 FIS1,FC=-0.66,p=1.77e-13 RABL5,FC=0.20,p=0.010748098 RABL5,FC=0.04,p=0.77978929 EMID2,FC=-0.11,p=0.305986332 EMID2,FC=0.27,p=0.183837695 MYL10,FC=0.72,p=0.000201819 MYL10,FC=0.82,p=3.94e-05 CUX1,FC=0.10,p=0.541015658 CUX1,FC=0.61,p=6.49e-07 CUX1,FC=0.08,p=0.356662346 CUX1,FC=0.82,p=1.24e-08 CUX1,FC=0.61,p=1.39e-07 SH2B2,FC=0.85,p=2.09e-11 PRKRIP1,FC=1.18,p=2.48e-12 PRKRIP1,FC=0.65,p=8.31e-15 PRKRIP1,FC=0.35,p=0.061703941 PRKRIP1,FC=0.24,p=0.004957709 ORAI2,FC=-0.11,p=0.341055135 ORAI2,FC=0.38,p=0.000163507 ORAI2,FC=0.54,p=0.006905944 ALKBH4,FC=0.55,p=2.64e-09 LRWD1,FC=-0.03,p=0.791888818 POLR2J,FC=0.83,p=2.83e-22 POLR2J,FC=-0.29,p=0.135620282 POLR2J2,FC=1.47,p=1.66e-21 FAM185A,FC=0.60,p=0.004725353 FBXL13,FC=-0.30,p=0.066192201 FBXL13,FC=0.33,p=0.113789034 LRRC17,FC=-0.11,p=0.57847132 LRRC17,FC=0.27,p=0.216906525 ARMC10,FC=0.72,p=4.75e-13 NAPEPLD,FC=0.08,p=0.494441177 NAPEPLD,FC=0.20,p=0.03013445 NAPEPLD,FC=0.19,p=0.045552912 NAPEPLD,FC=0.25,p=0.017881149 NAPEPLD,FC=0.12,p=0.350053124 NAPEPLD,FC=0.02,p=0.864499427 DPY19L2P2,FC=0.01,p=0.926524903 PMPCB,FC=-0.55,p=2.02e-06 DNAJC2,FC=-0.49,p=0.063964005 DNAJC2,FC=0.41,p=1.45e-05 PSMC2,FC=-1.09,p=2.6e-20 PSMC2,FC=-1.01,p=9.3e-13 PSMC2,FC=0.35,p=2.77e-05 RELN,FC=-0.79,p=4.39e-06 RELN,FC=0.26,p=0.285512457 ORC5L,FC=-0.24,p=0.238876932 ORC5L,FC=0.73,p=1.08e-06 ORC5L,FC=0.65,p=2.48e-10 ORC5L,FC=0.97,p=0.000560835 LHFPL3,FC=0.37,p=0.114916982 MLL5,FC=-0.97,p=5.54e-19 MLL5,FC=-0.15,p=0.09454811 MLL5,FC=-0.80,p=2.05e-15 SRPK2,FC=0.78,p=7.07e-17 SRPK2,FC=0.57,p=0.001091673 SRPK2,FC=-0.05,p=0.663067157 SRPK2,FC=0.57,p=1.15e-05 SRPK2,FC=0.70,p=8.7e-15 SRPK2,FC=0.64,p=8.35e-07 PUS7,FC=1.12,p=2.86e-21 RINT1,FC=0.22,p=0.03729889 ATXN7L1,FC=0.82,p=0.002503258 ATXN7L1,FC=0.68,p=0.000297037 FLJ23834,FC=-1.89,p=8.54e-17 SYPL1,FC=0.85,p=7.64e-09 SYPL1,FC=0.94,p=7.89e-19 NAMPT,FC=-0.61,p=0.000116597 NAMPT,FC=3.13,p=2.16e-11 FLJ36031,FC=0.17,p=0.134595685 FLJ36031,FC=-0.17,p=0.44983511 PIK3CG,FC=-1.71,p=1.01e-15 PIK3CG,FC=-1.68,p=5.61e-11 PRKAR2B,FC=-1.38,p=8.29e-15 HBP1,FC=-0.38,p=0.015645815 HBP1,FC=-0.58,p=0.01244218 HBP1,FC=-0.39,p=9.97e-09 COG5,FC=0.15,p=0.074153844 COG5,FC=-0.43,p=4.47e-05 COG5,FC=0.66,p=7.26e-21 GPR22,FC=-0.47,p=0.13461258 GPR22,FC=-0.53,p=0.042943589 DUS4L,FC=0.03,p=0.852935425 DUS4L,FC=0.67,p=6.98e-08 BCAP29,FC=-0.92,p=1.13e-07 BCAP29,FC=-1.11,p=1.05e-25 BCAP29,FC=-0.57,p=1.74e-09 BCAP29,FC=-0.37,p=0.002910543 BCAP29,FC=-1.24,p=3.1e-15 BCAP29,FC=0.70,p=0.000217458 LOC286002,FC=-0.57,p=0.019672315 SLC26A4,FC=-0.73,p=0.000409047 CBLL1,FC=-0.06,p=0.656112783 SLC26A3,FC=0.53,p=0.032945751 SLC26A3,FC=0.09,p=0.761755173


        Stanford (GSE3398)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      NPTX2,FC=0.30,p=0.481901004 SMURF1,FC=0.53,p=0.121903979 ARPC1A,FC=0.96,p=0.001594694 ARPC1B,FC=0.41,p=0.17203076 PDAP1,FC=0.50,p=0.03055406 ATP5J2,FC=0.70,p=0.012726217 AZGP1,FC=0.69,p=0.466283185 AP4M1,FC=0.79,p=0.001603108 STAG3,FC=1.64,p=0.00233896 STAG3,FC=0.01,p=0.972676075 PCOLCE,FC=1.21,p=0.001694403 PCOLCE,FC=1.10,p=0.017386694 TFR2,FC=0.72,p=0.020718711 GNB2,FC=0.45,p=0.052629476 EPHB4,FC=0.53,p=0.051026282 TRIP6,FC=0.49,p=0.065015332 TRIP6,FC=0.49,p=0.065015332 ACHE,FC=0.90,p=0.010001139 SERPINE1,FC=-0.78,p=0.147943637 AP1S1,FC=1.69,p=0.000123488 PLOD3,FC=0.65,p=0.012899111 POLR2J,FC=0.84,p=0.000775155 POLR2J,FC=0.81,p=0.000471947 PMPCB,FC=0.16,p=0.41804773 PSMC2,FC=0.28,p=0.273960055 RELN,FC=-0.03,p=0.927424692 SRPK2,FC=0.26,p=0.347802007 SRPK2,FC=0.87,p=0.00295647 PIK3CG,FC=-0.29,p=0.532635016 PRKAR2B,FC=-0.57,p=0.070067791 PRKAR2B,FC=0.56,p=0.036502484 HBP1,FC=-0.32,p=0.134546679 HBP1,FC=0.79,p=0.155951604 SLC26A3,FC=-0.33,p=0.550038474

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      NPTX2,FC=0.61,p=0.067982535 SMURF1,FC=-0.11,p=0.752724784 ARPC1A,FC=1.00,p=0.000448367 ARPC1B,FC=-0.53,p=0.150662962 PDAP1,FC=0.56,p=0.050132257 ATP5J2,FC=0.86,p=0.012372412 AZGP1,FC=-0.87,p=0.410246001 AP4M1,FC=0.47,p=0.048554671 STAG3,FC=1.32,p=0.001155191 STAG3,FC=0.16,p=0.608681965 PCOLCE,FC=0.63,p=0.305330749 PCOLCE,FC=0.45,p=0.364196097 TFR2,FC=0.98,p=0.011674238 GNB2,FC=0.24,p=0.419689755 EPHB4,FC=0.16,p=0.606736533 TRIP6,FC=0.65,p=0.033806655 TRIP6,FC=0.65,p=0.033806655 ACHE,FC=0.47,p=0.069942973 SERPINE1,FC=-0.65,p=0.2906198 AP1S1,FC=1.80,p=0.000964797 PLOD3,FC=0.21,p=0.440851624 POLR2J,FC=0.91,p=0.002090699 POLR2J,FC=0.73,p=0.009546647 PMPCB,FC=0.36,p=0.151196536 PSMC2,FC=0.44,p=0.108990492 RELN,FC=1.20,p=0.004264955 SRPK2,FC=0.31,p=0.169683827 SRPK2,FC=0.88,p=0.000882068 PIK3CG,FC=-0.75,p=0.335303483 PRKAR2B,FC=-0.21,p=0.590861575 PRKAR2B,FC=0.43,p=0.12804792 HBP1,FC=-0.19,p=0.557086477 HBP1,FC=0.73,p=0.218390543 SLC26A3,FC=0.10,p=0.815490999


        Agilent_HS_21.6K (GSE11969)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      NPTX2,FC=0.13,p=0.206592994 CDC14B,FC=-0.06,p=0.035483827 TRRAP,FC=0.16,p=6.11e-06 SMURF1,FC=-0.05,p=0.383649053 MYH16,FC=-0.05,p=0.523402951 ARPC1A,FC=0.01,p=0.826154589 ARPC1B,FC=-0.08,p=0.290487133 PDAP1,FC=-0.11,p=0.082260082 CPSF4,FC=0.03,p=0.230417157 ATP5J2,FC=0.33,p=1.11e-11 ZNF394,FC=-0.08,p=0.075000488 CYP3A43,FC=0.10,p=0.017973835 TRIM4,FC=-0.23,p=0.026787897 AZGP1,FC=0.04,p=0.770572789 AZGP1,FC=0.04,p=0.440472606 ZNF3,FC=-0.05,p=0.294686532 COPS6,FC=0.01,p=0.847022432 AP4M1,FC=-0.08,p=0.02135674 GAL3ST4,FC=0.01,p=0.64248754 GPC2,FC=-0.00,p=0.890335845 GPC2,FC=0.02,p=0.359957607 STAG3,FC=0.05,p=0.359607426 STAG3,FC=-0.15,p=0.005755682 STAG3,FC=-0.06,p=0.115650671 PILRB,FC=0.11,p=0.156042299 PILRA,FC=-0.36,p=3.8e-14 ZCWPW1,FC=-0.02,p=0.660993737 FBXO24,FC=0.08,p=0.213263799 PCOLCE,FC=-0.13,p=0.002227561 MOSPD3,FC=0.01,p=0.720329263 TFR2,FC=0.07,p=0.019625895 ACTL6B,FC=-0.22,p=4.31e-05 GNB2,FC=-0.32,p=4.84e-07 POP7,FC=0.19,p=0.002733253 EPO,FC=-0.05,p=0.275838707 ZAN,FC=0.05,p=0.175165886 EPHB4,FC=0.06,p=0.700355569 SLC12A9,FC=-0.02,p=0.618533141 TRIP6,FC=0.05,p=0.490168427 ACHE,FC=0.08,p=0.51681622 MUC17,FC=0.14,p=0.140948779 TRIM56,FC=-0.03,p=0.639314283 TRIM56,FC=-0.17,p=0.024589299 SERPINE1,FC=-0.20,p=0.01003691 AP1S1,FC=0.09,p=0.016026657 VGF,FC=0.01,p=0.931213312 PLOD3,FC=-0.06,p=0.045119943 ZNHIT1,FC=0.15,p=0.006687788 CLDN15,FC=0.06,p=0.15456965 RABL5,FC=0.07,p=0.315496727 EMID2,FC=0.05,p=0.092725386 PRKRIP1,FC=0.13,p=0.019647249 FBXL13,FC=0.02,p=0.636364662 LRRC17,FC=0.12,p=0.333784672 RELN,FC=0.02,p=0.779440685 ORC5L,FC=0.09,p=0.000346596 MLL5,FC=-0.05,p=0.437513592 MLL5,FC=0.04,p=0.572563119 SRPK2,FC=0.10,p=0.102178954 ATXN7L1,FC=-0.02,p=0.652498353 FLJ36031,FC=0.03,p=0.595027314 PIK3CG,FC=0.01,p=0.603580341 PRKAR2B,FC=-0.09,p=0.206567026 HBP1,FC=-0.25,p=0.01360739 HBP1,FC=0.02,p=0.854483463 COG5,FC=0.06,p=0.011874832 GPR22,FC=0.09,p=0.018225495 BCAP29,FC=0.16,p=0.025850116 BCAP29,FC=0.02,p=0.304536607 SLC26A4,FC=0.05,p=0.338535178 CBLL1,FC=0.10,p=0.007798887 SLC26A3,FC=0.03,p=0.61067418 SLC26A3,FC=0.00,p=0.995941992

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      NPTX2,FC=0.06,p=0.478690798 CDC14B,FC=-0.07,p=0.006794308 TRRAP,FC=0.15,p=7.71e-06 SMURF1,FC=-0.10,p=0.033754905 MYH16,FC=-0.08,p=0.312953817 ARPC1A,FC=0.05,p=0.230307526 ARPC1B,FC=-0.20,p=0.009393742 PDAP1,FC=-0.00,p=0.991739454 CPSF4,FC=0.05,p=0.02182963 ATP5J2,FC=0.37,p=2.54e-08 ZNF394,FC=-0.06,p=0.122786358 CYP3A43,FC=0.09,p=0.033015594 TRIM4,FC=-0.32,p=0.001037216 AZGP1,FC=-0.23,p=0.00012358 AZGP1,FC=-0.01,p=0.890720524 ZNF3,FC=-0.05,p=0.253624008 COPS6,FC=0.06,p=0.270219918 AP4M1,FC=-0.10,p=0.003769041 GAL3ST4,FC=0.01,p=0.612148652 GPC2,FC=-0.02,p=0.401811408 GPC2,FC=0.00,p=0.864529941 STAG3,FC=0.02,p=0.684676672 STAG3,FC=-0.19,p=0.00010834 STAG3,FC=-0.06,p=0.027940646 PILRB,FC=0.01,p=0.887180127 PILRA,FC=-0.39,p=1.82e-15 ZCWPW1,FC=-0.08,p=0.038846054 FBXO24,FC=0.05,p=0.516884441 PCOLCE,FC=-0.15,p=0.000135499 MOSPD3,FC=0.02,p=0.69703375 TFR2,FC=0.10,p=0.000285406 ACTL6B,FC=-0.18,p=0.000233504 GNB2,FC=-0.27,p=3.44e-05 POP7,FC=0.27,p=2.61e-06 EPO,FC=-0.08,p=0.018264575 ZAN,FC=0.03,p=0.325827613 EPHB4,FC=0.07,p=0.619406137 SLC12A9,FC=-0.06,p=0.012929833 TRIP6,FC=0.08,p=0.173753362 ACHE,FC=-0.08,p=0.427230719 MUC17,FC=0.12,p=0.034452675 TRIM56,FC=-0.07,p=0.250158306 TRIM56,FC=-0.20,p=0.047823317 SERPINE1,FC=-0.07,p=0.403845917 AP1S1,FC=0.06,p=0.104699778 VGF,FC=0.03,p=0.773151653 PLOD3,FC=-0.08,p=0.001343433 ZNHIT1,FC=0.09,p=0.08897404 CLDN15,FC=0.07,p=0.09008226 RABL5,FC=-0.03,p=0.513931321 EMID2,FC=0.02,p=0.432787049 PRKRIP1,FC=0.10,p=0.023794562 FBXL13,FC=-0.03,p=0.432686171 LRRC17,FC=0.10,p=0.290892234 RELN,FC=0.07,p=0.366932942 ORC5L,FC=0.10,p=0.001416017 MLL5,FC=-0.17,p=0.012111964 MLL5,FC=-0.06,p=0.297375376 SRPK2,FC=0.12,p=0.046270324 ATXN7L1,FC=-0.01,p=0.739202546 FLJ36031,FC=0.01,p=0.785338333 PIK3CG,FC=-0.00,p=0.869780086 PRKAR2B,FC=-0.16,p=0.008154734 HBP1,FC=-0.33,p=0.000690673 HBP1,FC=-0.04,p=0.602828927 COG5,FC=0.06,p=0.014098103 GPR22,FC=0.10,p=0.003322968 BCAP29,FC=0.09,p=0.169768747 BCAP29,FC=0.02,p=0.398237793 SLC26A4,FC=0.06,p=0.297766087 CBLL1,FC=0.13,p=0.004635577 SLC26A3,FC=0.02,p=0.828005728 SLC26A3,FC=-0.01,p=0.440591261


< Top >


    Copy Number Alteration Data        (help)
            ( red: amplification / green : deletion)

         Adenocarcinoma          Squamous Cell Carcinoma
        Meyerson Adenocarcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE17958 Squamous Cell Carcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE12280_SGOL (SCC / aCGH)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

      

< Top >


    miRNA Expression Data        (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        GSE15201
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-miR-25,Mean=-1.04 hsa-miR-93,Mean=-3.10 hsa-miR-106b,Mean=-2.99

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-miR-25,Mean=-1.46 hsa-miR-93,Mean=-3.59 hsa-miR-106b,Mean=-3.48

        GSE18692
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-mir-25,Mean=-0.05 hsa-mir-93,Mean=0.01 hsa-mir-106b,Mean=0.16

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-mir-25,Mean=0.11 hsa-mir-93,Mean=0.28 hsa-mir-106b,Mean=0.54

< Top >


    Paired (U133A/aCGH) AD Sample Data        (help) (PubMed)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

NPTX2,FC=0.83,p=5.94e-05 TRRAP,FC=0.80,p=7.49e-23 TRRAP,FC=0.34,p=6.59e-07 SMURF1,FC=0.47,p=6.41e-13 SMURF1,FC=0.67,p=1.88e-10 SMURF1,FC=1.27,p=1.55e-12 ARPC1A,FC=0.26,p=0.001026893 ARPC1B,FC=0.59,p=1.11e-19 PDAP1,FC=0.56,p=0.001740578 PDAP1,FC=1.52,p=6.79e-48 BUD31,FC=0.19,p=0.003050729 CPSF4,FC=0.03,p=0.676617771 ATP5J2,FC=0.20,p=0.000187202 ATP5J2,FC=0.39,p=5.09e-12 ZNF394,FC=0.25,p=0.001069626 ZKSCAN5,FC=0.35,p=3.53e-07 ZKSCAN5,FC=-0.28,p=1.11e-05 CYP3A43,FC=-0.46,p=0.003178879 CYP3A43,FC=-0.08,p=0.672891527 CYP3A43,FC=-0.84,p=2.89e-28 CYP3A43,FC=-0.67,p=3.36e-05 AZGP1,FC=0.82,p=0.0072841 ZKSCAN1,FC=0.73,p=1.05e-09 ZKSCAN1,FC=0.32,p=0.001090907 ZNF3,FC=-0.66,p=1.22e-05 ZNF3,FC=-0.96,p=4.89e-12 ZNF3,FC=0.81,p=3.78e-17 COPS6,FC=0.31,p=2.06e-08 COPS6,FC=-0.03,p=0.532664904 MCM7,FC=0.63,p=4.79e-09 AP4M1,FC=1.05,p=2.83e-16 TAF6,FC=0.69,p=6.34e-26 CNPY4,FC=-0.42,p=0.006170982 C7orf43,FC=0.71,p=1.13e-08 GAL3ST4,FC=-0.05,p=0.446026652 STAG3,FC=0.15,p=0.183127704 PVRIG,FC=-0.12,p=0.167950541 PMS2L1,FC=0.47,p=3.67e-11 PMS2L1,FC=0.17,p=0.012358574 PMS2L1,FC=0.09,p=0.213636785 PMS2L1,FC=0.68,p=6.94e-21 PILRB,FC=0.46,p=0.008436112 PILRA,FC=-0.45,p=0.000105361 PILRA,FC=-1.00,p=8.89e-18 ZCWPW1,FC=-0.70,p=2.48e-05 MEPCE,FC=-0.45,p=1.55e-14 TSC22D4,FC=0.24,p=0.000722971 AGFG2,FC=0.72,p=2.1e-12 LRCH4,FC=-0.03,p=0.598237333 LRCH4,FC=0.36,p=0.001202807 LRCH4,FC=0.51,p=4.67e-06 FBXO24,FC=1.14,p=4.42e-12 PCOLCE,FC=0.38,p=0.001033724 MOSPD3,FC=-0.01,p=0.882755191 TFR2,FC=1.50,p=2.64e-15 TFR2,FC=0.02,p=0.912173919 TFR2,FC=1.25,p=1.3e-16 ACTL6B,FC=-0.72,p=8.57e-06 ACTL6B,FC=-0.22,p=0.01320015 ACTL6B,FC=-0.50,p=9.37e-18 GNB2,FC=0.11,p=0.089825445 POP7,FC=0.38,p=1.94e-07 EPO,FC=0.23,p=0.108677407 EPO,FC=0.11,p=0.488911279 EPHB4,FC=0.29,p=0.000282701 EPHB4,FC=-0.14,p=0.080279269 SLC12A9,FC=0.08,p=0.262146355 TRIP6,FC=0.42,p=9.47e-06 SRRT,FC=0.13,p=0.042908779 SRRT,FC=0.40,p=6.64e-05 SRRT,FC=2.81,p=5.84e-64 SRRT,FC=0.18,p=0.005045784 ACHE,FC=1.02,p=2.16e-07 ACHE,FC=0.70,p=0.003083758 SERPINE1,FC=-0.13,p=0.513453702 SERPINE1,FC=0.27,p=0.118856836 AP1S1,FC=0.77,p=1.71e-17 AP1S1,FC=1.90,p=3.79e-42 AP1S1,FC=3.03,p=9.3e-54 VGF,FC=0.81,p=3.27e-09 PLOD3,FC=0.03,p=0.618502307 ZNHIT1,FC=0.62,p=1.37e-17 CLDN15,FC=0.34,p=0.010683629 FIS1,FC=-0.47,p=5.45e-13 RABL5,FC=0.64,p=0.00160919 MYL10,FC=-0.28,p=0.078200102 MYL10,FC=0.58,p=1.89e-06 CUX1,FC=0.09,p=0.183262616 CUX1,FC=0.02,p=0.722358965 SH2B2,FC=-0.09,p=0.312648179 PRKRIP1,FC=0.45,p=1.53e-05 ORAI2,FC=0.32,p=3.67e-06 ORAI2,FC=0.60,p=7.13e-12 ALKBH4,FC=0.83,p=9.01e-21 POLR2J,FC=1.23,p=1.08e-14 POLR2J,FC=0.91,p=6.15e-33 POLR2J2,FC=0.81,p=8.87e-23 LRRC17,FC=-0.06,p=0.573365414 DPY19L2P2,FC=-0.31,p=0.003848264 PMPCB,FC=0.11,p=0.088470591 DNAJC2,FC=0.67,p=1.55e-18 PSMC2,FC=0.23,p=4.35e-05 PSMC2,FC=-0.79,p=3.27e-13 RELN,FC=-0.87,p=5.31e-14 ORC5L,FC=0.96,p=1.38e-20 ORC5L,FC=0.37,p=4.37e-09 ORC5L,FC=0.42,p=0.088647503 SRPK2,FC=-0.24,p=0.107261911 SRPK2,FC=-0.10,p=0.12741759 SRPK2,FC=-0.10,p=0.269446207 SRPK2,FC=0.27,p=7.93e-07 PUS7,FC=0.77,p=4.36e-22 RINT1,FC=0.73,p=3.55e-25 ATXN7L1,FC=0.57,p=5.71e-05 ATXN7L1,FC=0.21,p=0.184327723 SYPL1,FC=0.14,p=0.020416779 SYPL1,FC=0.42,p=3.06e-05 NAMPT,FC=-0.13,p=0.233897666 PIK3CG,FC=0.98,p=1.73e-05 PIK3CG,FC=0.63,p=8.5e-05 PRKAR2B,FC=-0.34,p=0.006034241 HBP1,FC=-0.43,p=4.43e-15 HBP1,FC=0.48,p=1.25e-05 COG5,FC=0.78,p=1.28e-29 COG5,FC=0.16,p=0.047894859 GPR22,FC=-0.05,p=0.755367658 DUS4L,FC=0.89,p=1.42e-09 DUS4L,FC=0.75,p=1.05e-15 BCAP29,FC=0.58,p=7.44e-08 BCAP29,FC=-0.46,p=0.000964047 BCAP29,FC=0.24,p=0.039130764 SLC26A4,FC=-0.10,p=0.459773912 CBLL1,FC=0.41,p=0.001084497 SLC26A3,FC=-0.59,p=0.003294579 SLC26A3,FC=-0.30,p=0.079438946

< Top >


    Array CGH Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

RP4-550A13, 19/50, 0.38 RP4-550A13, 2/50, 0.04 RP11-114P12, 26/50, 0.52 RP11-114P12, 1/50, 0.02 RP4-604G5, 14/50, 0.28 RP4-604G5, 0/50, 0 RP11-506M12, 28/50, 0.56 RP11-506M12, 1/50, 0.02 RP11-44M6, 16/50, 0.32 RP11-44M6, 10/50, 0.2 RP5-1059M17, 20/50, 0.4 RP5-1059M17, 2/50, 0.04 RP11-333G13, 29/50, 0.58 RP11-333G13, 1/50, 0.02 RP11-401L13, 7/50, 0.14 RP11-401L13, 4/50, 0.08 RP4-672O11, 8/50, 0.16 RP4-672O11, 2/50, 0.04 RP11-148A10, 7/50, 0.14 RP11-148A10, 5/50, 0.1 RP11-22N19, 7/50, 0.14 RP11-22N19, 0/50, 0 RP11-17I10, 13/50, 0.26 RP11-17I10, 1/50, 0.02

< Top >


    CGH Minimal Deletion Region Data        (help)      Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

PMID=16322280

< Top >


    LOH Frequency Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.

Our unpublished data D7S515, 16/43, 37% Our unpublished data D7S1799, 16/28, 57% Our unpublished data D7S2459, 15/32, 47% PMID=10987304 D7S515, 4/19, 21% PMID=11980668 D7S1530, 13/29, 45% D7S1799, 5/17, 29% PMID=15900585 D7S1799, 1/18, 6%

< Top >


Download all image files.
Save all PNG files.    Save all PDF files.    Save all PS files.