IGDB.NSCLC Chromosome View

Chromosome 7
7p22 7p21 7p15 7p14 7p13 7p12 7p11 7q11 7q21 7q22 7q31 7q32 7q33 7q34 7q35 7q36         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Move   
-
        
   Zoom

    Lung Cancer Genes with Experimental Evidence         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: up-regulation / green : down-regulation / gray : mutation)

CAV2, down, 114/159(72%) CAV1, down, 82/159(52%) MET, up, 14/23(61%) MET, 2.22%, 16/722

(Click the gene to hyperlink to gene view.)    

    Gene Expression Microarray Data         (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        HG_U95 (Meyerson, GSE2514)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLC26A3,FC=0.27,p=0.348358172 DLD,FC=-0.00,p=0.970758587 LAMB1,FC=-0.75,p=8.09e-07 LAMB4,FC=0.43,p=0.079242279 NRCAM,FC=-0.51,p=0.05924356 NRCAM,FC=0.23,p=0.264379849 NRCAM,FC=0.22,p=0.337218386 DNAJB9,FC=-0.29,p=0.089479498 LRRN3,FC=-2.31,p=4.62e-18 DOCK4,FC=-1.54,p=2.2e-30 IFRD1,FC=-0.14,p=0.418591413 IFRD1,FC=-0.20,p=0.123962838 PPP1R3A,FC=0.09,p=0.685014386 MDFIC,FC=-0.19,p=0.144159441 TFEC,FC=-0.64,p=0.001540832 TES,FC=-0.18,p=0.156390318 CAV2,FC=-0.38,p=0.025218209 CAV2,FC=-1.96,p=3.69e-18 CAV1,FC=-2.94,p=1.46e-33 MET,FC=0.44,p=0.071469538 MET,FC=0.43,p=0.070290976 MET,FC=0.27,p=0.193705486 MET,FC=0.33,p=0.09051985 CAPZA2,FC=-0.46,p=1.96e-10 ST7,FC=-0.79,p=0.000405369 ST7,FC=-0.50,p=6.23e-07 ST7,FC=-0.97,p=1.19e-06 CFTR,FC=0.28,p=0.278215716 CFTR,FC=-0.33,p=0.15943917 CFTR,FC=-0.81,p=0.003279849 ANKRD7,FC=0.14,p=0.565125845 KCND2,FC=0.41,p=0.053479908 ING3,FC=-0.82,p=4.36e-05 PTPRZ1,FC=0.18,p=0.573968253 AASS,FC=-0.35,p=0.107453036 NDUFA5,FC=-0.22,p=0.104634253 WASL,FC=-0.58,p=0.004041998 WASL,FC=-0.19,p=0.321637925 SPAM1,FC=0.09,p=0.623563676 GPR37,FC=1.43,p=2.95e-05 POT1,FC=-0.02,p=0.940843821 GRM8,FC=0.49,p=0.022129196

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLC26A3,FC=0.16,p=0.652105387 DLD,FC=0.42,p=0.001783301 LAMB1,FC=-0.55,p=0.000695438 LAMB4,FC=0.34,p=0.3301037 NRCAM,FC=0.38,p=0.328931729 NRCAM,FC=0.81,p=0.005883294 NRCAM,FC=0.61,p=0.061161193 DNAJB9,FC=-0.70,p=0.000554068 LRRN3,FC=-2.40,p=4.15e-10 DOCK4,FC=-2.03,p=9.88e-26 IFRD1,FC=-0.12,p=0.531429069 IFRD1,FC=-0.22,p=0.051070459 PPP1R3A,FC=0.44,p=0.083284132 MDFIC,FC=-0.74,p=1.64e-07 TFEC,FC=-1.17,p=1.13e-05 TES,FC=-0.17,p=0.244479103 CAV2,FC=-0.25,p=0.304243323 CAV2,FC=-1.38,p=1.81e-08 CAV1,FC=-2.94,p=2.72e-22 MET,FC=-0.44,p=0.198739046 MET,FC=0.11,p=0.675916881 MET,FC=0.15,p=0.611331887 MET,FC=-0.12,p=0.477229848 CAPZA2,FC=-0.76,p=3.68e-14 ST7,FC=-1.17,p=8.12e-05 ST7,FC=-1.05,p=4.1e-14 ST7,FC=-1.53,p=1.02e-08 CFTR,FC=-0.07,p=0.851755973 CFTR,FC=-0.71,p=0.040176944 CFTR,FC=-1.49,p=1.09e-05 ANKRD7,FC=-0.31,p=0.3474083 KCND2,FC=0.06,p=0.82481947 ING3,FC=-1.21,p=4.96e-06 PTPRZ1,FC=3.75,p=6.93e-11 AASS,FC=-0.48,p=0.087087814 NDUFA5,FC=-0.23,p=0.166243261 WASL,FC=-1.25,p=0.000117175 WASL,FC=-0.45,p=0.084846653 SPAM1,FC=0.57,p=0.05378224 GPR37,FC=0.82,p=0.015348448 POT1,FC=-0.02,p=0.949767165 GRM8,FC=0.36,p=0.155425919


        HG_U133A (GSE7670, GSE17475, DCLungStudy, GSE4573, GSE10072)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLC26A3,FC=0.08,p=0.67090386 SLC26A3,FC=-0.20,p=0.173420902 DLD,FC=0.09,p=0.304364594 LAMB1,FC=-0.50,p=1.05e-07 LAMB1,FC=-0.78,p=2.2e-13 LAMB4,FC=-0.20,p=0.173908711 LAMB4,FC=-0.11,p=0.41142632 NRCAM,FC=-0.75,p=1.13e-08 NRCAM,FC=-0.05,p=0.398534587 DNAJB9,FC=0.35,p=0.000130147 DNAJB9,FC=-0.95,p=8.19e-11 LRRN3,FC=-2.28,p=2.09e-120 LRRN3,FC=-2.54,p=2.76e-66 DOCK4,FC=-1.86,p=9.24e-77 ZNF277,FC=0.15,p=0.060091941 ZNF277,FC=-0.12,p=0.127939618 IFRD1,FC=0.28,p=0.013127056 IFRD1,FC=-0.36,p=6.31e-05 TMEM168,FC=-0.06,p=0.399648119 GPR85,FC=0.17,p=0.221684191 PPP1R3A,FC=-0.45,p=0.011542143 PPP1R3A,FC=-0.27,p=0.040042758 MDFIC,FC=0.28,p=0.038781781 MDFIC,FC=-0.13,p=0.184931157 TFEC,FC=-0.59,p=6.4e-08 TES,FC=-0.01,p=0.917219228 TES,FC=0.14,p=0.084467314 AMBP,FC=0.01,p=0.858599618 CAV2,FC=-1.77,p=2.59e-37 CAV2,FC=-2.63,p=5.91e-93 CAV1,FC=-2.74,p=1.27e-72 CAV1,FC=-3.15,p=8e-104 MET,FC=0.52,p=2.91e-07 MET,FC=0.76,p=2.03e-11 MET,FC=0.19,p=0.086524151 MET,FC=0.38,p=0.060251116 CAPZA2,FC=-0.22,p=0.006381822 CAPZA2,FC=-0.41,p=1.14e-08 ST7,FC=-0.62,p=1.57e-12 ST7,FC=-0.45,p=3.15e-15 WNT2,FC=-1.02,p=6.9e-21 CFTR,FC=-0.42,p=1.75e-05 CFTR,FC=-0.96,p=5.6e-08 CFTR,FC=-0.59,p=0.000219598 CFTR,FC=-1.75,p=7.85e-14 LSM8,FC=0.37,p=1.04e-10 ANKRD7,FC=0.30,p=0.078730477 KCND2,FC=0.51,p=0.001018186 TSPAN12,FC=-1.32,p=4.47e-18 ING3,FC=-0.45,p=1.25e-12 C7orf58,FC=-0.57,p=4.81e-30 WNT16,FC=0.05,p=0.643615986 PTPRZ1,FC=0.02,p=0.928465358 AASS,FC=-0.59,p=0.000287921 AASS,FC=-0.22,p=0.149469929 CADPS2,FC=-0.25,p=0.002181383 TAS2R16,FC=-0.36,p=1.61e-09 SLC13A1,FC=-0.35,p=0.065168037 SLC13A1,FC=-0.04,p=0.851204562 NDUFA5,FC=0.05,p=0.602051495 NDUFA5,FC=0.40,p=0.004198138 WASL,FC=0.67,p=1.18e-06 WASL,FC=1.14,p=2.45e-09 HYAL4,FC=-0.01,p=0.886573865 SPAM1,FC=-0.54,p=5.37e-06 GPR37,FC=1.68,p=4.23e-13 GPR37,FC=0.79,p=0.000467373 POT1,FC=0.27,p=6e-05 POT1,FC=0.24,p=0.001110274 GRM8,FC=-0.18,p=0.290171568 GRM8,FC=-0.21,p=0.034674834 GRM8,FC=-0.51,p=4.99e-06

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLC26A3,FC=3.41,p=1.39e-43 SLC26A3,FC=4.93,p=1.82e-87 DLD,FC=-3.37,p=6.18e-126 LAMB1,FC=0.89,p=5.78e-09 LAMB1,FC=2.21,p=3.24e-80 LAMB4,FC=2.43,p=3e-24 LAMB4,FC=2.43,p=1.06e-39 NRCAM,FC=-0.17,p=0.236718726 NRCAM,FC=-2.70,p=1.26e-79 DNAJB9,FC=0.77,p=2.6e-12 DNAJB9,FC=2.00,p=5.81e-33 LRRN3,FC=-1.67,p=1.47e-51 LRRN3,FC=-2.27,p=6.6e-42 DOCK4,FC=-3.79,p=4.21e-67 ZNF277,FC=1.00,p=2.61e-35 ZNF277,FC=-0.23,p=0.037178871 IFRD1,FC=2.49,p=1.54e-65 IFRD1,FC=1.40,p=9.51e-49 TMEM168,FC=0.55,p=4.63e-15 GPR85,FC=4.15,p=6.66e-80 PPP1R3A,FC=3.32,p=1.93e-54 PPP1R3A,FC=2.24,p=1.13e-39 MDFIC,FC=-0.11,p=0.426012592 MDFIC,FC=-8.72,p=1.54e-149 TFEC,FC=-3.13,p=4.68e-50 TES,FC=-1.64,p=2.71e-35 TES,FC=-0.17,p=0.098075015 AMBP,FC=-3.47,p=5.66e-106 CAV2,FC=-2.75,p=9.45e-108 CAV2,FC=-3.61,p=8.04e-134 CAV1,FC=-3.68,p=8.68e-86 CAV1,FC=-4.18,p=3.09e-145 MET,FC=-3.45,p=2.31e-63 MET,FC=0.48,p=6.12e-10 MET,FC=4.13,p=1.03e-105 MET,FC=-1.10,p=9.14e-21 CAPZA2,FC=0.20,p=0.007145672 CAPZA2,FC=1.69,p=9.95e-48 ST7,FC=-3.62,p=2.99e-65 ST7,FC=-2.09,p=4.02e-58 WNT2,FC=-2.27,p=1.66e-77 CFTR,FC=-2.62,p=3.45e-65 CFTR,FC=1.69,p=2.03e-38 CFTR,FC=-1.69,p=5.49e-37 CFTR,FC=-0.30,p=0.087135149 LSM8,FC=-0.68,p=7.35e-12 ANKRD7,FC=4.44,p=1.95e-85 KCND2,FC=0.93,p=9.92e-11 TSPAN12,FC=-0.63,p=2.44e-11 ING3,FC=-3.74,p=5.37e-84 C7orf58,FC=1.41,p=6.7e-59 WNT16,FC=-0.74,p=2.41e-13 PTPRZ1,FC=0.27,p=0.016696983 AASS,FC=-1.63,p=9.02e-25 AASS,FC=-2.23,p=5.86e-37 CADPS2,FC=-0.19,p=0.072395231 TAS2R16,FC=-2.02,p=5.16e-35 SLC13A1,FC=4.85,p=2.01e-88 SLC13A1,FC=2.27,p=1.2e-20 NDUFA5,FC=4.52,p=2.72e-158 NDUFA5,FC=-3.76,p=6.85e-53 WASL,FC=3.39,p=1.28e-59 WASL,FC=1.04,p=3.1e-07 HYAL4,FC=4.27,p=1.87e-126 SPAM1,FC=-1.70,p=2.79e-20 GPR37,FC=4.18,p=6.91e-68 GPR37,FC=2.84,p=9.97e-36 POT1,FC=-2.93,p=5.58e-39 POT1,FC=0.42,p=0.000350849 GRM8,FC=0.64,p=1.08e-05 GRM8,FC=-1.28,p=6.96e-34 GRM8,FC=5.90,p=1.5e-113


        HG_U133_Plus2 (GSE3141, GSE10245, GSE10445, GSE12667, GSE10799, GSE16538, GSE7307, GSE3526)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLC26A3,FC=-0.05,p=0.858926473 SLC26A3,FC=0.15,p=0.479200194 DLD,FC=-0.48,p=2e-05 DLD,FC=-0.13,p=0.183761152 LAMB1,FC=-0.77,p=3.35e-10 LAMB1,FC=-0.63,p=2.85e-07 LAMB1,FC=-0.34,p=0.038405521 LAMB4,FC=0.03,p=0.88445453 LAMB4,FC=-0.29,p=0.122676359 LAMB4,FC=0.18,p=0.361453714 NRCAM,FC=-0.34,p=0.097942328 NRCAM,FC=0.49,p=0.004591781 NRCAM,FC=-0.98,p=5.11e-07 NRCAM,FC=0.37,p=0.046582981 PNPLA8,FC=-0.21,p=0.005471298 PNPLA8,FC=-0.38,p=7.2e-07 PNPLA8,FC=-0.39,p=1.05e-06 THAP5,FC=0.80,p=0.000215232 DNAJB9,FC=1.20,p=2.98e-12 DNAJB9,FC=-0.04,p=0.807569408 DNAJB9,FC=-0.24,p=0.117410503 CCDC138,FC=-0.00,p=0.980434429 IMMP2L,FC=-0.15,p=0.220175453 IMMP2L,FC=-0.67,p=9.08e-07 IMMP2L,FC=-1.06,p=3.57e-07 IMMP2L,FC=-0.32,p=0.001775181 IMMP2L,FC=0.15,p=0.248200536 IMMP2L,FC=-0.47,p=0.007872321 LRRN3,FC=-2.43,p=5.02e-49 LRRN3,FC=-3.26,p=2.98e-42 DOCK4,FC=-1.17,p=1.36e-14 DOCK4,FC=-1.80,p=4.15e-49 DOCK4,FC=-0.67,p=0.00012183 DOCK4,FC=0.04,p=0.866719594 ZNF277,FC=-0.20,p=0.243133838 ZNF277,FC=-0.56,p=0.000410033 ZNF277,FC=0.17,p=0.022137591 ZNF277,FC=0.45,p=1.5e-05 IFRD1,FC=-0.19,p=0.051658815 IFRD1,FC=-0.20,p=0.085649811 C7orf53,FC=-0.73,p=4.09e-05 C7orf53,FC=-0.09,p=0.571763251 TMEM168,FC=0.06,p=0.671289769 TMEM168,FC=0.06,p=0.330360783 C7orf60,FC=-0.26,p=0.013169994 GPR85,FC=0.31,p=0.094286103 GPR85,FC=-0.75,p=7.2e-05 LOC401397,FC=0.21,p=0.032960384 PPP1R3A,FC=0.05,p=0.825269678 PPP1R3A,FC=0.29,p=0.156048926 FOXP2,FC=-0.14,p=0.514368399 FOXP2,FC=-0.61,p=0.001003202 FOXP2,FC=0.41,p=0.016805981 FOXP2,FC=0.06,p=0.750375257 FOXP2,FC=0.21,p=0.140398569 FOXP2,FC=0.02,p=0.911018842 FOXP2,FC=-0.70,p=0.000339694 FOXP2,FC=-0.70,p=0.000124852 MDFIC,FC=-0.40,p=0.000156858 MDFIC,FC=0.19,p=0.091670821 MDFIC,FC=0.57,p=0.000334118 TFEC,FC=-1.06,p=5.77e-10 TFEC,FC=-0.80,p=1.04e-05 TFEC,FC=-1.08,p=7.49e-07 TES,FC=0.48,p=2.18e-07 TES,FC=0.16,p=0.024743425 AMBP,FC=0.71,p=7.13e-05 CAV2,FC=-2.58,p=2.3e-54 CAV2,FC=-1.88,p=5.92e-29 CAV1,FC=-2.27,p=5.92e-35 CAV1,FC=-2.46,p=7.46e-48 MET,FC=1.05,p=5.57e-06 MET,FC=0.67,p=0.000350817 MET,FC=0.10,p=0.643216711 MET,FC=0.70,p=0.001524161 CAPZA2,FC=-0.28,p=0.003167515 CAPZA2,FC=-0.24,p=0.014416654 CAPZA2,FC=-1.07,p=9.83e-07 ST7OT1,FC=-1.12,p=8.16e-14 ST7,FC=-0.02,p=0.873390484 ST7,FC=-0.80,p=3.95e-14 ST7OT2,FC=-0.59,p=0.006286593 WNT2,FC=-0.65,p=3.84e-07 ASZ1,FC=-0.62,p=0.010527327 CFTR,FC=-2.38,p=9.06e-15 CFTR,FC=0.30,p=0.212734568 CFTR,FC=0.04,p=0.845565391 CFTR,FC=-2.61,p=1.83e-23 CFTR,FC=-2.55,p=3.65e-23 CTTNBP2,FC=-1.22,p=2.07e-07 LSM8,FC=0.16,p=0.093053492 ANKRD7,FC=0.72,p=0.001995276 MCTS1,FC=0.00,p=0.970374609 KCND2,FC=0.66,p=0.000787004 TSPAN12,FC=0.05,p=0.740339321 TSPAN12,FC=-0.41,p=0.05237289 TSPAN12,FC=-1.15,p=2.43e-11 ING3,FC=-0.18,p=0.022242795 ING3,FC=-0.72,p=4.46e-16 ING3,FC=-0.28,p=0.001402704 C7orf58,FC=-0.63,p=1.32e-11 C7orf58,FC=-1.79,p=5.01e-31 WNT16,FC=0.56,p=0.008280157 WNT16,FC=0.24,p=0.36025207 FAM3C,FC=0.92,p=1.07e-05 FAM3C,FC=0.65,p=1.15e-05 PTPRZ1,FC=-0.02,p=0.935422598 AASS,FC=-0.36,p=0.042677739 AASS,FC=-0.50,p=7.93e-05 CADPS2,FC=0.18,p=0.105995895 TAS2R16,FC=0.74,p=0.001876396 SLC13A1,FC=0.70,p=0.003953086 SLC13A1,FC=-0.03,p=0.883959943 IQUB,FC=-0.58,p=0.003214248 NDUFA5,FC=-0.51,p=0.000477506 NDUFA5,FC=-0.05,p=0.545258164 ASB15,FC=0.49,p=0.017723151 LMOD2,FC=-0.09,p=0.581868353 WASL,FC=0.69,p=0.000101689 WASL,FC=0.25,p=0.170119579 WASL,FC=0.23,p=0.164915113 WASL,FC=-0.19,p=0.02014511 HYALP1,FC=0.13,p=0.573549846 HYAL4,FC=0.23,p=0.17579635 SPAM1,FC=0.35,p=0.074948528 GPR37,FC=0.91,p=0.00054158 GPR37,FC=1.44,p=2.46e-06 POT1,FC=0.15,p=0.204295346 POT1,FC=0.35,p=5.07e-05 GRM8,FC=0.55,p=0.000247772 GRM8,FC=-0.22,p=0.265543867 GRM8,FC=-0.01,p=0.976276729 HINT3,FC=-1.35,p=5.58e-12 ZNF800,FC=0.20,p=0.160354913 ZNF800,FC=0.22,p=0.177164786

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLC26A3,FC=0.09,p=0.761755173 SLC26A3,FC=0.53,p=0.032945751 DLD,FC=-0.62,p=3.63e-07 DLD,FC=0.10,p=0.248176037 LAMB1,FC=-0.78,p=2.27e-07 LAMB1,FC=-0.25,p=0.034325667 LAMB1,FC=-0.54,p=0.002410726 LAMB4,FC=0.65,p=0.014805512 LAMB4,FC=-0.43,p=0.041730808 LAMB4,FC=0.77,p=0.000241313 NRCAM,FC=0.89,p=0.000225117 NRCAM,FC=0.88,p=1.86e-05 NRCAM,FC=0.56,p=0.025790893 NRCAM,FC=1.26,p=2.9e-09 PNPLA8,FC=-0.22,p=0.005801154 PNPLA8,FC=-0.71,p=2.11e-15 PNPLA8,FC=-0.66,p=2.44e-14 THAP5,FC=0.72,p=0.004962888 DNAJB9,FC=1.06,p=2.57e-11 DNAJB9,FC=-0.58,p=0.000171413 DNAJB9,FC=-1.00,p=1.84e-06 CCDC138,FC=0.60,p=7.61e-09 IMMP2L,FC=-0.71,p=1.33e-05 IMMP2L,FC=-1.01,p=1.5e-10 IMMP2L,FC=-1.35,p=6.85e-11 IMMP2L,FC=-0.45,p=0.000414579 IMMP2L,FC=-0.29,p=0.034455868 IMMP2L,FC=-0.63,p=0.000140479 LRRN3,FC=-2.58,p=2.58e-38 LRRN3,FC=-4.00,p=1.14e-40 DOCK4,FC=-1.48,p=4.52e-16 DOCK4,FC=-2.75,p=9.53e-42 DOCK4,FC=-0.75,p=0.000331688 DOCK4,FC=-0.38,p=0.049667482 ZNF277,FC=-0.61,p=0.000111827 ZNF277,FC=-1.08,p=1.15e-08 ZNF277,FC=-0.17,p=0.07578338 ZNF277,FC=0.47,p=9.24e-05 IFRD1,FC=-0.33,p=0.001565696 IFRD1,FC=-0.26,p=0.030303269 C7orf53,FC=-1.36,p=8.22e-10 C7orf53,FC=-0.15,p=0.388046698 TMEM168,FC=-0.22,p=0.103959022 TMEM168,FC=0.04,p=0.551228622 C7orf60,FC=-0.39,p=0.001815026 GPR85,FC=0.50,p=0.016212356 GPR85,FC=-1.15,p=7.04e-07 LOC401397,FC=-0.00,p=0.97055197 PPP1R3A,FC=0.25,p=0.377744379 PPP1R3A,FC=0.72,p=0.004304983 FOXP2,FC=-0.16,p=0.524282307 FOXP2,FC=-0.73,p=0.000494869 FOXP2,FC=0.49,p=0.016858873 FOXP2,FC=-0.01,p=0.970732968 FOXP2,FC=-0.12,p=0.444618271 FOXP2,FC=0.53,p=0.000365341 FOXP2,FC=-0.75,p=0.000131107 FOXP2,FC=-0.13,p=0.404285904 MDFIC,FC=-1.11,p=4.9e-21 MDFIC,FC=-0.13,p=0.238137291 MDFIC,FC=-0.28,p=0.099355622 TFEC,FC=-2.06,p=1.37e-15 TFEC,FC=-1.72,p=8.1e-10 TFEC,FC=-2.07,p=2.26e-13 TES,FC=0.47,p=1.36e-05 TES,FC=-0.12,p=0.104916413 AMBP,FC=1.13,p=4.43e-07 CAV2,FC=-2.26,p=4.49e-36 CAV2,FC=-1.80,p=1.01e-21 CAV1,FC=-2.08,p=9.02e-22 CAV1,FC=-2.56,p=1.08e-34 MET,FC=0.18,p=0.324385096 MET,FC=0.41,p=0.007342126 MET,FC=-0.49,p=0.000138288 MET,FC=0.34,p=0.113854725 CAPZA2,FC=-0.85,p=7.58e-13 CAPZA2,FC=-0.63,p=1.2e-07 CAPZA2,FC=-1.96,p=4.22e-13 ST7OT1,FC=-1.11,p=1.66e-12 ST7,FC=0.24,p=0.101110451 ST7,FC=-1.58,p=4.68e-32 ST7OT2,FC=-0.28,p=0.190103511 WNT2,FC=-0.87,p=1.64e-11 ASZ1,FC=-0.66,p=0.016228431 CFTR,FC=-4.09,p=1.91e-31 CFTR,FC=0.20,p=0.46313327 CFTR,FC=0.12,p=0.616228592 CFTR,FC=-3.89,p=1.24e-40 CFTR,FC=-3.53,p=3.3e-35 CTTNBP2,FC=-1.22,p=5.69e-06 LSM8,FC=0.15,p=0.068417361 ANKRD7,FC=0.90,p=0.000324779 MCTS1,FC=-0.19,p=0.076099198 KCND2,FC=0.39,p=0.082886629 TSPAN12,FC=-0.70,p=9.47e-07 TSPAN12,FC=-2.05,p=1.42e-18 TSPAN12,FC=-3.07,p=1.32e-35 ING3,FC=-0.26,p=0.011076953 ING3,FC=-1.24,p=4.42e-23 ING3,FC=-0.70,p=1.7e-09 C7orf58,FC=-0.56,p=1.52e-07 C7orf58,FC=-2.81,p=2.29e-30 WNT16,FC=0.62,p=0.003118745 WNT16,FC=0.20,p=0.439255828 FAM3C,FC=0.49,p=0.039199781 FAM3C,FC=0.44,p=0.004619699 PTPRZ1,FC=3.88,p=2.34e-26 AASS,FC=0.02,p=0.911369785 AASS,FC=-0.27,p=0.067505497 CADPS2,FC=-0.70,p=6.55e-12 TAS2R16,FC=1.61,p=4.06e-09 SLC13A1,FC=0.54,p=0.042081013 SLC13A1,FC=0.27,p=0.283429573 IQUB,FC=-0.98,p=2.03e-05 NDUFA5,FC=-0.66,p=0.000122144 NDUFA5,FC=-0.43,p=5.44e-06 ASB15,FC=0.54,p=0.012724571 LMOD2,FC=-0.42,p=0.019878355 WASL,FC=0.57,p=0.002073999 WASL,FC=-0.31,p=0.046894969 WASL,FC=0.33,p=0.020012996 WASL,FC=-0.43,p=1.4e-07 HYALP1,FC=0.36,p=0.175544051 HYAL4,FC=0.16,p=0.375927913 SPAM1,FC=0.79,p=0.000386417 GPR37,FC=0.43,p=0.103359119 GPR37,FC=0.29,p=0.332049994 POT1,FC=0.23,p=0.040361419 POT1,FC=0.27,p=0.001043196 GRM8,FC=0.92,p=2.76e-08 GRM8,FC=-0.21,p=0.327550113 GRM8,FC=-0.12,p=0.634577687 HINT3,FC=-1.79,p=6.1e-16 ZNF800,FC=-0.09,p=0.460748447 ZNF800,FC=-0.16,p=0.357009011


        Stanford (GSE3398)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLC26A3,FC=-0.33,p=0.550038474 DLD,FC=0.43,p=0.040993795 LAMB1,FC=0.24,p=0.594573194 LAMB1,FC=0.66,p=0.132694593 LAMB1,FC=0.13,p=0.696730943 NRCAM,FC=0.12,p=0.778805163 DNAJB9,FC=-0.40,p=0.285042998 DNAJB9,FC=-0.50,p=0.26631622 IMMP2L,FC=0.09,p=0.808786487 IFRD1,FC=0.63,p=0.005639414 IFRD1,FC=-0.08,p=0.870952564 IFRD1,FC=0.31,p=0.226147789 IFRD1,FC=-0.08,p=0.870952564 TES,FC=-0.59,p=0.040623267 CAV2,FC=-2.01,p=2.61e-06 CAV2,FC=-2.86,p=4.58e-11 CAV2,FC=-2.36,p=3.48e-07 CAV1,FC=-3.03,p=1.59e-07 CAV1,FC=-3.00,p=4.53e-08 MET,FC=0.02,p=0.970429705 MET,FC=0.10,p=0.837963138 CAPZA2,FC=-1.40,p=0.004678236 ST7,FC=-0.57,p=0.023120508 ST7,FC=-0.57,p=0.023120508 ST7,FC=-0.75,p=0.002185873 ST7,FC=-0.56,p=0.047652036 WNT2,FC=-0.77,p=0.107833525 WNT2,FC=-0.19,p=0.721438776 WNT2,FC=-0.55,p=0.255627314 ING3,FC=0.04,p=0.93340943 ING3,FC=-0.13,p=0.697634947 PTPRZ1,FC=-0.23,p=0.40761512 SLC13A1,FC=-0.85,p=0.296169591 SLC13A1,FC=0.88,p=0.00141604 SLC13A1,FC=0.36,p=0.531746755 SLC13A1,FC=0.53,p=0.239799318 NDUFA5,FC=-0.06,p=0.751485177 GPR37,FC=0.10,p=0.664210283 GRM8,FC=0.36,p=0.454956288

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLC26A3,FC=0.10,p=0.815490999 DLD,FC=0.71,p=0.010938843 LAMB1,FC=-0.03,p=0.930637049 LAMB1,FC=0.42,p=0.376648984 LAMB1,FC=0.16,p=0.735256088 NRCAM,FC=0.95,p=0.022776097 DNAJB9,FC=-0.67,p=0.048935117 DNAJB9,FC=-0.80,p=0.025191426 IMMP2L,FC=-0.15,p=0.650376063 IFRD1,FC=0.48,p=0.080799053 IFRD1,FC=0.13,p=0.832101103 IFRD1,FC=0.44,p=0.089512421 IFRD1,FC=0.13,p=0.832101103 TES,FC=-0.59,p=0.051156753 CAV2,FC=-1.52,p=6.22e-05 CAV2,FC=-2.35,p=7.4e-08 CAV2,FC=-2.06,p=2.66e-06 CAV1,FC=-3.32,p=1.44e-08 CAV1,FC=-3.29,p=7.05e-07 MET,FC=-0.40,p=0.206524457 MET,FC=-0.49,p=0.227243806 CAPZA2,FC=-0.83,p=0.040372242 ST7,FC=-1.02,p=0.002036331 ST7,FC=-1.02,p=0.002036331 ST7,FC=-1.07,p=0.001840394 ST7,FC=-1.14,p=9.58e-05 WNT2,FC=-0.40,p=0.579707919 WNT2,FC=0.25,p=0.655744074 WNT2,FC=-0.35,p=0.451373875 ING3,FC=0.13,p=0.771750286 ING3,FC=-0.07,p=0.849110894 PTPRZ1,FC=1.29,p=0.003686868 SLC13A1,FC=-0.43,p=0.473069821 SLC13A1,FC=0.90,p=0.001586383 SLC13A1,FC=0.49,p=0.252592166 SLC13A1,FC=0.93,p=0.027135922 NDUFA5,FC=-0.17,p=0.413374263 GPR37,FC=-0.10,p=0.656996756 GRM8,FC=0.75,p=0.046581454


        Agilent_HS_21.6K (GSE11969)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLC26A3,FC=0.00,p=0.995941992 SLC26A3,FC=0.03,p=0.61067418 DLD,FC=-0.04,p=0.655881369 LAMB1,FC=-0.07,p=0.449838484 LAMB1,FC=-0.37,p=0.019755528 NRCAM,FC=0.01,p=0.73158717 NRCAM,FC=0.04,p=0.353040045 NRCAM,FC=0.07,p=0.258221246 DNAJB9,FC=0.05,p=0.381492409 IMMP2L,FC=0.09,p=0.087080254 LRRN3,FC=-0.15,p=0.000140368 LRRN3,FC=0.12,p=0.080516716 DOCK4,FC=-0.23,p=1.08e-05 ZNF277,FC=0.03,p=0.244761084 IFRD1,FC=0.14,p=0.065425616 GPR85,FC=0.05,p=0.175754341 PPP1R3A,FC=0.02,p=0.712873748 FOXP2,FC=0.01,p=0.926404216 TFEC,FC=0.01,p=0.780825817 TES,FC=-0.05,p=0.014769461 CAV2,FC=-0.01,p=0.880297659 CAV1,FC=-0.65,p=5.78e-15 MET,FC=0.04,p=0.002310812 CAPZA2,FC=0.09,p=0.291337903 ST7,FC=-0.12,p=0.002519683 WNT2,FC=0.03,p=0.573967962 ASZ1,FC=-0.06,p=0.502785809 CFTR,FC=-0.36,p=0.094192531 CTTNBP2,FC=0.04,p=0.743803327 LSM8,FC=0.22,p=0.00619397 LSM8,FC=0.13,p=0.010753358 LSM8,FC=-0.10,p=0.108799572 ANKRD7,FC=0.05,p=0.028133721 KCND2,FC=0.09,p=0.004241152 KCND2,FC=0.02,p=0.528902282 ING3,FC=-0.14,p=0.020604 WNT16,FC=0.04,p=0.576215714 PTPRZ1,FC=0.18,p=0.1037091 AASS,FC=0.00,p=0.990781242 CADPS2,FC=0.10,p=0.025379102 TAS2R16,FC=0.05,p=0.000423917 SLC13A1,FC=0.03,p=0.094588808 NDUFA5,FC=0.18,p=0.03319027 NDUFA5,FC=0.07,p=0.261310642 ASB15,FC=0.03,p=0.225307252 WASL,FC=0.01,p=0.895312277 HYAL4,FC=0.07,p=0.104268704 SPAM1,FC=0.03,p=0.534983609 GPR37,FC=0.03,p=0.02827182 POT1,FC=0.09,p=0.007170681 GRM8,FC=0.02,p=0.38546593 GRM8,FC=0.06,p=0.044063799

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLC26A3,FC=-0.01,p=0.440591261 SLC26A3,FC=0.02,p=0.828005728 DLD,FC=0.15,p=0.086620295 LAMB1,FC=-0.05,p=0.586146129 LAMB1,FC=-0.42,p=0.006683225 NRCAM,FC=0.01,p=0.565182193 NRCAM,FC=0.04,p=0.319458709 NRCAM,FC=0.09,p=0.163479755 DNAJB9,FC=-0.01,p=0.808664393 IMMP2L,FC=0.05,p=0.255438616 LRRN3,FC=-0.16,p=4.47e-06 LRRN3,FC=0.11,p=0.103786985 DOCK4,FC=-0.33,p=5.58e-08 ZNF277,FC=0.02,p=0.231274255 IFRD1,FC=0.17,p=0.003221999 GPR85,FC=0.02,p=0.646293974 PPP1R3A,FC=0.01,p=0.891059597 FOXP2,FC=0.00,p=0.930199973 TFEC,FC=-0.01,p=0.601725892 TES,FC=-0.07,p=0.004129618 CAV2,FC=0.05,p=0.366249199 CAV1,FC=-0.69,p=1.1e-11 MET,FC=0.03,p=0.068835563 CAPZA2,FC=0.03,p=0.691458236 ST7,FC=-0.16,p=0.001444939 WNT2,FC=0.02,p=0.666092617 ASZ1,FC=-0.12,p=0.13775743 CFTR,FC=-0.61,p=0.000867312 CTTNBP2,FC=0.16,p=0.241037544 LSM8,FC=0.25,p=7.95e-05 LSM8,FC=0.15,p=0.011599943 LSM8,FC=-0.13,p=0.114467722 ANKRD7,FC=0.05,p=0.010767779 KCND2,FC=0.10,p=0.01083587 KCND2,FC=0.02,p=0.382337526 ING3,FC=-0.22,p=0.000313498 WNT16,FC=0.06,p=0.339931948 PTPRZ1,FC=0.69,p=4.3e-06 AASS,FC=0.09,p=0.397182083 CADPS2,FC=0.01,p=0.889374202 TAS2R16,FC=0.04,p=0.00655574 SLC13A1,FC=0.03,p=0.068262774 NDUFA5,FC=0.21,p=0.051755534 NDUFA5,FC=-0.02,p=0.777939727 ASB15,FC=0.02,p=0.381223775 WASL,FC=-0.05,p=0.603921371 HYAL4,FC=0.08,p=0.065322087 SPAM1,FC=0.01,p=0.931828992 GPR37,FC=0.02,p=0.302487997 POT1,FC=0.10,p=0.001853787 GRM8,FC=0.02,p=0.488109983 GRM8,FC=0.07,p=0.028973961


< Top >


    Copy Number Alteration Data        (help)
            ( red: amplification / green : deletion)

         Adenocarcinoma          Squamous Cell Carcinoma
        Meyerson Adenocarcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE17958 Squamous Cell Carcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE12280_SGOL (SCC / aCGH)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

      

< Top >


    miRNA Expression Data        (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        GSE15201
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        GSE18692
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-mir-592,Mean=-0.02

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-mir-592,Mean=-0.01

< Top >


    Paired (U133A/aCGH) AD Sample Data        (help) (PubMed)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

SLC26A3,FC=-0.59,p=0.003294579 SLC26A3,FC=-0.30,p=0.079438946 DLD,FC=0.17,p=0.033568063 LAMB1,FC=-0.45,p=1.68e-05 LAMB1,FC=-0.61,p=1.61e-07 LAMB4,FC=-0.20,p=0.235180663 LAMB4,FC=-0.20,p=0.172138029 NRCAM,FC=-0.66,p=6.48e-06 NRCAM,FC=-0.51,p=8.27e-07 DNAJB9,FC=0.14,p=0.284431417 DNAJB9,FC=-0.04,p=0.521577549 LRRN3,FC=-2.39,p=1.57e-66 LRRN3,FC=-2.58,p=1.95e-42 DOCK4,FC=-1.74,p=3.48e-55 ZNF277,FC=0.51,p=9e-10 ZNF277,FC=0.04,p=0.539687591 IFRD1,FC=0.43,p=2.64e-05 IFRD1,FC=-0.37,p=4.03e-05 TMEM168,FC=0.08,p=0.15347973 GPR85,FC=0.37,p=0.020481224 PPP1R3A,FC=-0.15,p=0.451995575 PPP1R3A,FC=-0.25,p=0.117996908 MDFIC,FC=0.89,p=1.78e-07 MDFIC,FC=-0.03,p=0.722524463 TFEC,FC=-0.65,p=2.62e-11 TES,FC=0.17,p=0.028131628 TES,FC=0.27,p=0.003171915 AMBP,FC=-0.38,p=6.02e-05 CAV2,FC=-1.58,p=3.69e-26 CAV2,FC=-2.33,p=6.08e-53 CAV1,FC=-2.37,p=4.78e-48 CAV1,FC=-2.64,p=1.21e-59 MET,FC=0.63,p=9.34e-09 MET,FC=0.98,p=6.9e-13 MET,FC=0.77,p=3.77e-09 MET,FC=0.53,p=0.00381722 CAPZA2,FC=-0.25,p=0.00074633 CAPZA2,FC=-0.50,p=4.35e-13 ST7,FC=-0.34,p=0.000626225 ST7,FC=-0.73,p=6.04e-22 WNT2,FC=-0.94,p=3.34e-19 CFTR,FC=-0.88,p=1.69e-10 CFTR,FC=-0.74,p=1.35e-05 CFTR,FC=-0.85,p=9.18e-05 CFTR,FC=-1.63,p=9.5e-10 LSM8,FC=0.19,p=0.000571169 ANKRD7,FC=0.28,p=0.147748534 KCND2,FC=0.53,p=0.00113756 TSPAN12,FC=-1.04,p=2.08e-11 ING3,FC=-0.45,p=8.24e-10 C7orf58,FC=-0.56,p=9.11e-21 WNT16,FC=-0.32,p=0.012260125 PTPRZ1,FC=0.33,p=0.090979698 AASS,FC=-0.17,p=0.232419375 AASS,FC=0.22,p=0.142941059 CADPS2,FC=-0.09,p=0.235311952 TAS2R16,FC=-0.79,p=4.79e-22 SLC13A1,FC=-0.30,p=0.176913172 SLC13A1,FC=0.17,p=0.477815916 NDUFA5,FC=0.36,p=9.66e-06 NDUFA5,FC=0.33,p=0.022485422 WASL,FC=1.08,p=2.58e-11 WASL,FC=2.46,p=2.77e-32 HYAL4,FC=-0.06,p=0.609390751 SPAM1,FC=-0.96,p=3.77e-10 GPR37,FC=1.77,p=8.47e-12 GPR37,FC=1.64,p=8.19e-10 POT1,FC=0.36,p=9.42e-08 POT1,FC=0.14,p=0.031933175 GRM8,FC=-0.06,p=0.749221682 GRM8,FC=-0.45,p=0.000182804 GRM8,FC=-0.63,p=2.82e-05

< Top >


    Array CGH Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

RP11-443I10, 8/50, 0.16 RP11-443I10, 0/50, 0 RP11-5N18, 4/50, 0.08 RP11-5N18, 2/50, 0.04 RP11-238I13, 2/50, 0.04 RP11-238I13, 6/50, 0.12 RP11-358A10, 4/50, 0.08 RP11-358A10, 8/50, 0.16 RP5-905M6, 7/50, 0.14 RP5-905M6, 10/50, 0.2 RP11-328M22, 4/50, 0.08 RP11-328M22, 6/50, 0.12 RP11-563O5, 4/50, 0.08 RP11-563O5, 8/50, 0.16 RP11-45K3, 6/50, 0.12 RP11-45K3, 11/50, 0.22 RP11-354H2, 5/50, 0.1 RP11-354H2, 2/50, 0.04 RP11-374M7, 11/50, 0.22 RP11-374M7, 1/50, 0.02 RP5-866N18, 8/50, 0.16 RP5-866N18, 3/50, 0.06 RP11-126C19, 4/50, 0.08 RP11-126C19, 5/50, 0.1 RP11-105B19, 9/50, 0.18 RP11-105B19, 6/50, 0.12 RP11-376O14, 6/50, 0.12 RP11-376O14, 10/50, 0.2 RP11-384A20, 14/50, 0.28 RP11-384A20, 3/50, 0.06 RP11-560I19, 1/50, 0.02 RP11-560I19, 23/50, 0.46 RP11-106F1, 5/50, 0.1 RP11-106F1, 4/50, 0.08 RP5-902E20, 9/50, 0.18 RP5-902E20, 10/50, 0.2 RP11-264K23, 7/50, 0.14 RP11-264K23, 6/50, 0.12 RP11-420H19, 2/50, 0.04 RP11-420H19, 9/50, 0.18

< Top >


    CGH Minimal Deletion Region Data        (help)      Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

PMID=14581340 PMID=9591638

< Top >


    LOH Frequency Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.

Our unpublished data D7S1817, 9/14, 64% Our unpublished data D7S486, 14/29, 48% PMID=10987304 D7S486, 2/18, 11%

< Top >


Download all image files.
Save all PNG files.    Save all PDF files.    Save all PS files.