IGDB.NSCLC Chromosome View

Chromosome 7
7p22 7p21 7p15 7p14 7p13 7p12 7p11 7q11 7q21 7q22 7q31 7q32 7q33 7q34 7q35 7q36         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
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    Lung Cancer Genes with Experimental Evidence         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: up-regulation / green : down-regulation / gray : mutation)

, , BRAF, 2.95%, 54/1832 EPHB6, 2.48%, 5/202 EPHA1, 0.50%, 1/202

(Click the gene to hyperlink to gene view.)    

    Gene Expression Microarray Data         (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        HG_U95 (Meyerson, GSE2514)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      CREB3L2,FC=0.21,p=0.034738791 AKR1D1,FC=0.00,p=0.999620785 TRIM24,FC=0.41,p=0.001961199 ZC3HAV1,FC=0.01,p=0.911193467 HIPK2,FC=0.28,p=0.061369701 TBXAS1,FC=-0.71,p=2.39e-05 JHDM1D,FC=0.24,p=0.20422352 JHDM1D,FC=0.21,p=0.396757657 MKRN1,FC=0.13,p=0.121858569 SSBP1,FC=0.29,p=0.004090555 SSBP1,FC=0.29,p=0.01997913 EPHB6,FC=-1.55,p=1.86e-11 TRPV6,FC=-0.19,p=0.349382275 KEL,FC=-0.16,p=0.376724721 PIP,FC=-0.20,p=0.513575597 PIP,FC=0.47,p=0.091367198 CASP2,FC=0.19,p=0.090956252 CASP2,FC=0.35,p=0.001296699 CASP2,FC=0.09,p=0.664853382 CASP2,FC=-0.04,p=0.755160527 CLCN1,FC=0.33,p=0.009046211 FAM131B,FC=0.07,p=0.734528396 ZYX,FC=-0.70,p=3.84e-10 EPHA1,FC=0.63,p=0.002465129

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      CREB3L2,FC=-0.36,p=0.000515735 AKR1D1,FC=0.26,p=0.490917021 TRIM24,FC=0.40,p=0.037464733 ZC3HAV1,FC=0.13,p=0.11600273 HIPK2,FC=0.26,p=0.157772429 TBXAS1,FC=-1.60,p=4.97e-11 JHDM1D,FC=0.64,p=0.01925264 JHDM1D,FC=0.60,p=0.025985332 MKRN1,FC=0.01,p=0.852049804 SSBP1,FC=0.54,p=2.78e-05 SSBP1,FC=0.43,p=0.008117657 EPHB6,FC=0.46,p=0.168516392 TRPV6,FC=-0.10,p=0.741780817 KEL,FC=0.20,p=0.522135586 PIP,FC=-0.57,p=0.214343267 PIP,FC=0.41,p=0.319616011 CASP2,FC=0.44,p=0.013080293 CASP2,FC=0.30,p=0.057066874 CASP2,FC=0.16,p=0.495213472 CASP2,FC=0.14,p=0.338986388 CLCN1,FC=0.47,p=0.027064176 FAM131B,FC=-0.32,p=0.270755473 ZYX,FC=-0.71,p=1.67e-05 EPHA1,FC=1.46,p=2.25e-07


        HG_U133A (GSE7670, GSE17475, DCLungStudy, GSE4573, GSE10072)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      CREB3L2,FC=0.29,p=1.51e-05 AKR1D1,FC=-0.27,p=0.014553117 TRIM24,FC=0.45,p=1.16e-09 TRIM24,FC=0.39,p=1.6e-08 ATP6V0A4,FC=0.48,p=0.001239004 ZC3HAV1,FC=-0.68,p=8.45e-36 ZC3HAV1,FC=0.41,p=7.01e-09 TTC26,FC=-0.22,p=0.052556702 LUC7L2,FC=-0.10,p=0.053017335 LUC7L2,FC=-0.44,p=2.94e-11 HIPK2,FC=-0.04,p=0.567645008 TBXAS1,FC=-0.56,p=1.73e-06 PARP12,FC=-0.42,p=1.83e-10 JHDM1D,FC=0.08,p=0.191158961 MKRN1,FC=0.28,p=1.14e-05 MKRN1,FC=-0.13,p=0.004930013 DENND2A,FC=-1.43,p=4.14e-47 DENND2A,FC=-2.02,p=1.7e-36 ADCK2,FC=0.06,p=0.317966611 ADCK2,FC=-0.18,p=0.0001378 ADCK2,FC=-0.48,p=1.03e-09 ADCK2,FC=0.54,p=1.5e-05 NDUFB2,FC=0.04,p=0.397076758 NDUFB2,FC=0.22,p=8.66e-06 BRAF,FC=-0.08,p=0.200625878 MRPS33,FC=0.80,p=3.85e-28 AGK,FC=0.42,p=3.02e-15 AGK,FC=0.30,p=8.23e-06 SSBP1,FC=0.38,p=2.43e-06 SSBP1,FC=0.58,p=2.55e-18 TAS2R3,FC=-0.20,p=3.99e-06 TAS2R4,FC=-0.12,p=0.10655722 CLEC5A,FC=0.22,p=0.020361403 MGAM,FC=-0.60,p=0.00028251 LOC93432,FC=0.15,p=0.055788992 EPHB6,FC=-0.32,p=5.17e-06 TRPV6,FC=1.28,p=2.02e-16 TRPV5,FC=-0.20,p=0.034321287 KEL,FC=-0.53,p=4.12e-06 PIP,FC=0.17,p=0.336637469 GSTK1,FC=-0.08,p=0.219660305 CASP2,FC=0.12,p=0.080407182 CASP2,FC=0.39,p=2.52e-06 CASP2,FC=0.09,p=0.447245866 CASP2,FC=0.23,p=0.000158182 CASP2,FC=0.72,p=5.15e-13 CLCN1,FC=-0.36,p=0.00919827 FAM131B,FC=-0.92,p=1.93e-12 ZYX,FC=-0.81,p=4.74e-24 ZYX,FC=-0.85,p=1.01e-24 EPHA1,FC=0.08,p=0.319438962

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      CREB3L2,FC=-5.79,p=9.28e-119 AKR1D1,FC=5.47,p=1.89e-150 TRIM24,FC=-0.28,p=0.0198629 TRIM24,FC=0.52,p=7.48e-17 ATP6V0A4,FC=2.70,p=9.06e-74 ZC3HAV1,FC=1.81,p=4.03e-51 ZC3HAV1,FC=-0.82,p=3.1e-08 TTC26,FC=0.18,p=0.102522035 LUC7L2,FC=-1.80,p=2.76e-70 LUC7L2,FC=-1.96,p=4.28e-40 HIPK2,FC=-0.68,p=2.21e-08 TBXAS1,FC=-1.11,p=4.35e-28 PARP12,FC=-0.86,p=5.65e-20 JHDM1D,FC=-0.35,p=2.16e-11 MKRN1,FC=-0.85,p=1.13e-12 MKRN1,FC=-0.38,p=1.98e-12 DENND2A,FC=-1.62,p=6.5e-33 DENND2A,FC=-1.74,p=1.54e-47 ADCK2,FC=-3.13,p=7.12e-67 ADCK2,FC=-5.03,p=6.41e-114 ADCK2,FC=3.75,p=5.48e-126 ADCK2,FC=-0.68,p=2.26e-09 NDUFB2,FC=-7.05,p=1.8e-176 NDUFB2,FC=-8.39,p=2.52e-157 BRAF,FC=-0.29,p=0.000436988 MRPS33,FC=-0.28,p=3.47e-06 AGK,FC=-1.55,p=9.85e-63 AGK,FC=1.25,p=2.86e-37 SSBP1,FC=2.05,p=3.14e-63 SSBP1,FC=-1.38,p=2.74e-61 TAS2R3,FC=3.85,p=1.58e-119 TAS2R4,FC=-0.52,p=2.55e-07 CLEC5A,FC=3.20,p=3.41e-107 MGAM,FC=4.63,p=9.57e-79 LOC93432,FC=-2.42,p=2.9e-36 EPHB6,FC=1.12,p=6.58e-38 TRPV6,FC=0.77,p=1.58e-09 TRPV5,FC=-2.00,p=4.56e-31 KEL,FC=0.28,p=0.070420136 PIP,FC=2.11,p=1.15e-40 GSTK1,FC=-4.61,p=9.61e-104 CASP2,FC=-1.11,p=7.93e-15 CASP2,FC=-1.86,p=1.57e-44 CASP2,FC=2.24,p=1.7e-45 CASP2,FC=-0.04,p=0.514677566 CASP2,FC=4.80,p=5.74e-115 CLCN1,FC=0.78,p=7.67e-05 FAM131B,FC=3.17,p=1.7e-85 ZYX,FC=-1.80,p=1.77e-59 ZYX,FC=-1.04,p=2.97e-28 EPHA1,FC=-0.54,p=1.36e-07


        HG_U133_Plus2 (GSE3141, GSE10245, GSE10445, GSE12667, GSE10799, GSE16538, GSE7307, GSE3526)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      CREB3L2,FC=0.13,p=0.110768059 CREB3L2,FC=0.15,p=0.274253022 CREB3L2,FC=0.27,p=0.022350127 CREB3L2,FC=0.80,p=1.68e-06 AKR1D1,FC=0.09,p=0.681964475 TRIM24,FC=0.44,p=1.6e-05 TRIM24,FC=0.32,p=0.001434679 SVOPL,FC=0.60,p=0.00567183 ATP6V0A4,FC=1.15,p=1.09e-05 TMEM213,FC=-0.29,p=0.132806355 TMEM213,FC=-0.87,p=0.00106771 KIAA1549,FC=-0.26,p=0.103074048 KIAA1549,FC=0.29,p=0.107854849 KIAA1549,FC=-0.07,p=0.669856588 ZC3HAV1L,FC=0.51,p=0.025384791 ZC3HAV1,FC=0.34,p=0.000804292 ZC3HAV1,FC=-0.47,p=2.4e-08 ZC3HAV1,FC=-0.33,p=0.071683099 ZC3HAV1,FC=-0.33,p=2.95e-05 TTC26,FC=0.30,p=0.069262598 TTC26,FC=0.67,p=6.03e-06 TTC26,FC=0.26,p=0.017799741 TTC26,FC=0.38,p=0.10593639 UBN2,FC=0.50,p=0.006983433 UBN2,FC=0.40,p=2.29e-06 UBN2,FC=-0.10,p=0.127787569 C7orf55,FC=-0.39,p=7.59e-06 LUC7L2,FC=-0.23,p=0.016576618 LUC7L2,FC=1.85,p=2.26e-09 LUC7L2,FC=0.21,p=0.000219949 LUC7L2,FC=0.13,p=0.030125548 CLEC2L,FC=0.85,p=6.39e-05 HIPK2,FC=-0.25,p=0.093796298 HIPK2,FC=-0.75,p=0.000230718 HIPK2,FC=0.25,p=0.083042772 HIPK2,FC=-0.35,p=0.049052553 HIPK2,FC=-0.09,p=0.574280368 TBXAS1,FC=-0.91,p=1.58e-13 TBXAS1,FC=-0.18,p=0.105529989 PARP12,FC=0.04,p=0.649917825 JHDM1D,FC=0.19,p=0.009518025 JHDM1D,FC=0.27,p=0.007679471 SLC37A3,FC=0.34,p=4.72e-05 MKRN1,FC=-0.03,p=0.650821395 MKRN1,FC=0.20,p=0.002038861 DENND2A,FC=-1.37,p=1.17e-25 DENND2A,FC=-2.04,p=5.49e-21 ADCK2,FC=-0.11,p=0.276107155 ADCK2,FC=0.07,p=0.325817374 ADCK2,FC=-0.01,p=0.925341018 ADCK2,FC=0.31,p=0.000140422 NDUFB2,FC=0.10,p=0.083229444 NDUFB2,FC=0.29,p=3.14e-05 BRAF,FC=1.03,p=5.78e-12 BRAF,FC=0.56,p=1.05e-09 MRPS33,FC=0.69,p=4.68e-16 AGK,FC=0.59,p=9.65e-15 AGK,FC=0.53,p=7.17e-11 AGK,FC=0.38,p=0.091620764 KIAA1147,FC=-0.09,p=0.173755385 KIAA1147,FC=-0.02,p=0.784029794 KIAA1147,FC=-0.27,p=0.001994732 SSBP1,FC=0.18,p=0.023628059 SSBP1,FC=-0.15,p=0.407157635 SSBP1,FC=-0.14,p=0.160548228 TAS2R3,FC=0.05,p=0.712843389 TAS2R4,FC=0.41,p=0.030237041 TAS2R5,FC=0.04,p=0.840176226 LOC136242,FC=-0.17,p=0.373004933 CLEC5A,FC=-0.55,p=0.003265333 TAS2R38,FC=0.30,p=0.128250425 MGAM,FC=-2.58,p=2.99e-24 LOC93432,FC=0.29,p=0.188735725 TRYX3,FC=0.20,p=0.222652635 EPHB6,FC=-0.46,p=8.42e-05 TRPV6,FC=0.48,p=0.007743566 TRPV5,FC=0.44,p=0.005595061 TRPV5,FC=0.57,p=0.000506568 C7orf34,FC=0.30,p=0.113176122 C7orf34,FC=-0.08,p=0.636476418 KEL,FC=-0.05,p=0.778717031 OR6W1P,FC=0.22,p=0.065853067 PIP,FC=-0.19,p=0.50001871 TAS2R39,FC=0.70,p=0.001158232 TAS2R40,FC=0.32,p=0.088591519 GSTK1,FC=0.07,p=0.383579469 GSTK1,FC=-0.90,p=7.02e-05 TMEM139,FC=-1.75,p=1.68e-13 TMEM139,FC=-1.41,p=1.39e-09 CASP2,FC=0.96,p=2.61e-08 CASP2,FC=0.46,p=2.13e-12 CASP2,FC=0.82,p=3.53e-06 CASP2,FC=1.06,p=1.4e-07 CASP2,FC=0.82,p=1.1e-06 CASP2,FC=0.84,p=1.48e-06 CASP2,FC=1.21,p=9.76e-13 CLCN1,FC=0.18,p=0.288225041 FAM131B,FC=0.04,p=0.82762808 ZYX,FC=-0.76,p=2.49e-10 ZYX,FC=-0.64,p=1.16e-06 EPHA1,FC=0.58,p=3.83e-06 EPHA1,FC=0.19,p=0.376983148

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      CREB3L2,FC=-0.44,p=5.55e-07 CREB3L2,FC=-0.58,p=0.003013888 CREB3L2,FC=0.62,p=3.43e-06 CREB3L2,FC=1.03,p=7.43e-08 AKR1D1,FC=0.47,p=0.042682781 TRIM24,FC=0.48,p=1.31e-06 TRIM24,FC=0.19,p=0.051192699 SVOPL,FC=0.46,p=0.058326056 ATP6V0A4,FC=0.55,p=0.029706896 TMEM213,FC=-0.51,p=0.007915261 TMEM213,FC=-1.46,p=4.9e-08 KIAA1549,FC=-0.08,p=0.690994504 KIAA1549,FC=0.31,p=0.105691819 KIAA1549,FC=0.63,p=3.63e-05 ZC3HAV1L,FC=0.38,p=0.19611041 ZC3HAV1,FC=0.19,p=0.164223058 ZC3HAV1,FC=-0.53,p=1.26e-08 ZC3HAV1,FC=-1.22,p=3.88e-09 ZC3HAV1,FC=-0.24,p=0.00238251 TTC26,FC=0.82,p=1e-07 TTC26,FC=0.19,p=0.300660671 TTC26,FC=-0.16,p=0.206337789 TTC26,FC=0.01,p=0.969918693 UBN2,FC=-0.08,p=0.569487628 UBN2,FC=0.42,p=5.05e-05 UBN2,FC=-0.31,p=0.000117854 C7orf55,FC=-0.48,p=6.42e-07 LUC7L2,FC=0.10,p=0.25538629 LUC7L2,FC=2.73,p=4.12e-13 LUC7L2,FC=0.50,p=2.72e-10 LUC7L2,FC=0.37,p=2.54e-07 CLEC2L,FC=1.75,p=2.7e-10 HIPK2,FC=-0.14,p=0.232784106 HIPK2,FC=-1.36,p=2.5e-08 HIPK2,FC=0.73,p=3.06e-07 HIPK2,FC=0.12,p=0.494309105 HIPK2,FC=0.23,p=0.240028866 TBXAS1,FC=-1.50,p=5.32e-23 TBXAS1,FC=-0.54,p=2.23e-05 PARP12,FC=-0.07,p=0.477444015 JHDM1D,FC=0.32,p=0.000327336 JHDM1D,FC=0.64,p=4.7e-06 SLC37A3,FC=0.02,p=0.810491243 MKRN1,FC=0.21,p=0.020679983 MKRN1,FC=0.28,p=0.00084233 DENND2A,FC=-1.64,p=3.68e-27 DENND2A,FC=-2.70,p=1.62e-23 ADCK2,FC=-0.04,p=0.747865949 ADCK2,FC=0.38,p=3.81e-06 ADCK2,FC=0.42,p=0.019445691 ADCK2,FC=0.80,p=3.18e-12 NDUFB2,FC=-0.09,p=0.180600086 NDUFB2,FC=0.20,p=0.007057051 BRAF,FC=0.84,p=9.54e-07 BRAF,FC=0.86,p=1.81e-18 MRPS33,FC=0.54,p=2.97e-08 AGK,FC=0.89,p=3.14e-22 AGK,FC=0.54,p=1.07e-10 AGK,FC=0.07,p=0.79782202 KIAA1147,FC=-0.11,p=0.134830801 KIAA1147,FC=-0.26,p=0.015635046 KIAA1147,FC=-0.49,p=7.77e-08 SSBP1,FC=0.11,p=0.15479639 SSBP1,FC=-0.74,p=8.5e-05 SSBP1,FC=0.03,p=0.721336183 TAS2R3,FC=-0.27,p=0.067069242 TAS2R4,FC=0.75,p=0.00170866 TAS2R5,FC=-0.58,p=0.013006625 LOC136242,FC=0.40,p=0.053250351 CLEC5A,FC=-1.56,p=1.69e-11 TAS2R38,FC=1.01,p=6.64e-05 MGAM,FC=-2.66,p=1.93e-19 LOC93432,FC=0.89,p=0.000178064 TRYX3,FC=0.70,p=4.51e-06 EPHB6,FC=0.49,p=0.001931788 TRPV6,FC=0.76,p=4.04e-05 TRPV5,FC=1.04,p=1.61e-07 TRPV5,FC=1.02,p=7.46e-08 C7orf34,FC=0.67,p=0.003157406 C7orf34,FC=-0.07,p=0.7099955 KEL,FC=-0.27,p=0.126416591 OR6W1P,FC=0.40,p=0.000878737 PIP,FC=-1.15,p=0.000321035 TAS2R39,FC=1.49,p=8.98e-09 TAS2R40,FC=0.10,p=0.688728007 GSTK1,FC=-0.15,p=0.082225637 GSTK1,FC=-1.47,p=2.23e-08 TMEM139,FC=-2.93,p=2.09e-30 TMEM139,FC=-2.27,p=2.75e-22 CASP2,FC=0.97,p=4.11e-07 CASP2,FC=0.82,p=3.24e-23 CASP2,FC=1.82,p=4.8e-17 CASP2,FC=1.18,p=1.94e-08 CASP2,FC=0.88,p=1.89e-09 CASP2,FC=0.87,p=1.34e-07 CASP2,FC=1.29,p=9.22e-12 CLCN1,FC=0.25,p=0.190029268 FAM131B,FC=0.20,p=0.354004428 ZYX,FC=-0.23,p=0.084125341 ZYX,FC=-0.08,p=0.608083017 EPHA1,FC=1.53,p=3.03e-20 EPHA1,FC=0.51,p=0.043228755


        Stanford (GSE3398)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      HIPK2,FC=0.31,p=0.31186215 HIPK2,FC=0.04,p=0.86927751 TBXAS1,FC=-1.39,p=0.00031417 MKRN1,FC=0.67,p=0.076547828 NDUFB2,FC=-0.19,p=0.624863151 BRAF,FC=0.69,p=0.003204246 MRPS33,FC=0.79,p=0.002665611 SSBP1,FC=0.51,p=0.04299001 MGAM,FC=0.45,p=0.327028908 MGAM,FC=-0.14,p=0.602817011 EPHB6,FC=-0.57,p=0.111333004 KEL,FC=-0.44,p=0.093491422 PIP,FC=-0.95,p=0.148844224 PIP,FC=-0.78,p=0.220530151 EPHA1,FC=0.64,p=0.060159131 EPHA1,FC=0.64,p=0.060159131

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      HIPK2,FC=0.08,p=0.884601437 HIPK2,FC=-0.35,p=0.175008826 TBXAS1,FC=-1.85,p=1.64e-05 MKRN1,FC=-0.05,p=0.875919106 NDUFB2,FC=-0.34,p=0.367209189 BRAF,FC=0.68,p=0.002314186 MRPS33,FC=0.92,p=0.007893565 SSBP1,FC=0.90,p=0.011854015 MGAM,FC=0.83,p=0.12138503 MGAM,FC=0.15,p=0.623554437 EPHB6,FC=0.29,p=0.442719462 KEL,FC=-0.11,p=0.82481314 PIP,FC=-0.09,p=0.859581204 PIP,FC=-1.39,p=0.106149143 EPHA1,FC=0.80,p=0.12966012 EPHA1,FC=0.80,p=0.12966012


        Agilent_HS_21.6K (GSE11969)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      CREB3L2,FC=0.03,p=0.385278181 AKR1D1,FC=-0.06,p=0.361955341 ATP6V0A4,FC=0.17,p=0.105308253 KIAA1549,FC=0.19,p=0.005064474 ZC3HAV1,FC=-0.02,p=0.435311172 ZC3HAV1,FC=0.03,p=0.234447988 LUC7L2,FC=0.01,p=0.918565348 LUC7L2,FC=0.02,p=0.406437923 LUC7L2,FC=0.00,p=0.956383462 LUC7L2,FC=-0.07,p=0.024886761 TBXAS1,FC=-0.01,p=0.56158155 TBXAS1,FC=-0.24,p=0.001241949 SLC37A3,FC=0.18,p=0.007859565 MKRN1,FC=-0.01,p=0.786777466 MKRN1,FC=0.20,p=0.001689159 ADCK2,FC=-0.00,p=0.933258079 NDUFB2,FC=0.32,p=1.79e-05 BRAF,FC=0.04,p=0.220374451 BRAF,FC=0.16,p=0.00022723 MRPS33,FC=0.45,p=9.9e-10 SSBP1,FC=0.16,p=0.025554617 TAS2R3,FC=0.00,p=0.945439071 TAS2R4,FC=0.21,p=0.001784141 TAS2R5,FC=-0.01,p=0.824183961 MGAM,FC=0.09,p=0.233938464 EPHB6,FC=-0.02,p=0.142543862 TRPV5,FC=0.05,p=0.164325516 C7orf34,FC=0.05,p=0.014577531 KEL,FC=0.01,p=0.637172915 OR6W1P,FC=0.04,p=0.228433433 PIP,FC=0.02,p=0.837096663 GSTK1,FC=0.02,p=0.748393647 CASP2,FC=-0.12,p=0.076556306 CLCN1,FC=-0.01,p=0.807324868 ZYX,FC=-0.09,p=0.138225521 EPHA1,FC=-0.08,p=0.40492818

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      CREB3L2,FC=-0.02,p=0.400069597 AKR1D1,FC=-0.10,p=0.165992358 ATP6V0A4,FC=0.15,p=0.255099666 KIAA1549,FC=0.19,p=0.018910511 ZC3HAV1,FC=-0.03,p=0.251626619 ZC3HAV1,FC=0.03,p=0.322186073 LUC7L2,FC=-0.01,p=0.90387225 LUC7L2,FC=0.03,p=0.289865692 LUC7L2,FC=0.00,p=0.996577691 LUC7L2,FC=-0.05,p=0.22571266 TBXAS1,FC=-0.02,p=0.246529126 TBXAS1,FC=-0.29,p=0.000122529 SLC37A3,FC=0.04,p=0.60065415 MKRN1,FC=-0.05,p=0.440242627 MKRN1,FC=0.27,p=0.000494116 ADCK2,FC=0.00,p=0.950367916 NDUFB2,FC=0.28,p=0.000477974 BRAF,FC=0.03,p=0.476016602 BRAF,FC=0.18,p=0.000170399 MRPS33,FC=0.50,p=1.47e-07 SSBP1,FC=0.22,p=0.003144434 TAS2R3,FC=-0.03,p=0.393363236 TAS2R4,FC=0.20,p=0.000745963 TAS2R5,FC=-0.02,p=0.694625926 MGAM,FC=0.12,p=0.079516243 EPHB6,FC=0.02,p=0.495717495 TRPV5,FC=0.04,p=0.153260235 C7orf34,FC=0.05,p=0.050325734 KEL,FC=0.01,p=0.797649472 OR6W1P,FC=0.03,p=0.294162693 PIP,FC=-0.05,p=0.316752218 GSTK1,FC=-0.13,p=0.006262016 CASP2,FC=-0.02,p=0.835717207 CLCN1,FC=-0.00,p=0.863401338 ZYX,FC=-0.08,p=0.133445246 EPHA1,FC=0.01,p=0.894627284


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    Copy Number Alteration Data        (help)
            ( red: amplification / green : deletion)

         Adenocarcinoma          Squamous Cell Carcinoma
        Meyerson Adenocarcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE17958 Squamous Cell Carcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE12280_SGOL (SCC / aCGH)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

      

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    miRNA Expression Data        (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        GSE15201
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        GSE18692
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

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    Paired (U133A/aCGH) AD Sample Data        (help) (PubMed)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

CREB3L2,FC=0.42,p=5.67e-09 AKR1D1,FC=-0.69,p=2.5e-06 TRIM24,FC=0.52,p=5.47e-13 TRIM24,FC=0.32,p=2.79e-06 ATP6V0A4,FC=0.30,p=0.08060619 ZC3HAV1,FC=-0.72,p=5.71e-35 ZC3HAV1,FC=0.44,p=7.5e-08 TTC26,FC=-0.13,p=0.274996034 LUC7L2,FC=-0.06,p=0.265037692 LUC7L2,FC=-0.25,p=0.000118495 HIPK2,FC=0.08,p=0.223903963 TBXAS1,FC=-0.54,p=5.11e-05 PARP12,FC=-0.48,p=1.49e-11 JHDM1D,FC=0.10,p=0.067630153 MKRN1,FC=0.28,p=4.39e-06 MKRN1,FC=-0.05,p=0.269943003 DENND2A,FC=-1.49,p=3.66e-45 DENND2A,FC=-2.02,p=4.18e-31 ADCK2,FC=-0.03,p=0.630404446 ADCK2,FC=-0.22,p=2.78e-05 ADCK2,FC=-0.37,p=7.52e-06 ADCK2,FC=1.00,p=2.17e-09 NDUFB2,FC=-0.03,p=0.645764784 NDUFB2,FC=0.05,p=0.255605786 BRAF,FC=-0.13,p=0.047093322 MRPS33,FC=0.65,p=1.89e-23 AGK,FC=0.37,p=3.49e-10 AGK,FC=0.21,p=0.001004422 SSBP1,FC=0.16,p=0.141555947 SSBP1,FC=0.52,p=4.58e-16 TAS2R3,FC=-0.52,p=2.8e-21 TAS2R4,FC=-0.51,p=4.05e-06 CLEC5A,FC=0.21,p=0.063234886 MGAM,FC=-0.58,p=0.002770067 LOC93432,FC=-0.57,p=9.19e-06 EPHB6,FC=-0.53,p=4.68e-10 TRPV6,FC=1.70,p=8.73e-25 TRPV5,FC=-0.36,p=0.001034646 KEL,FC=-1.12,p=3.24e-15 PIP,FC=0.37,p=0.04634306 GSTK1,FC=-0.26,p=0.000128357 CASP2,FC=0.34,p=5.19e-07 CASP2,FC=0.41,p=6.16e-05 CASP2,FC=0.51,p=2.45e-05 CASP2,FC=0.27,p=5.21e-05 CASP2,FC=0.64,p=7.49e-09 CLCN1,FC=-0.44,p=0.002495997 FAM131B,FC=-1.07,p=7.84e-14 ZYX,FC=-0.97,p=6.4e-24 ZYX,FC=-1.05,p=2.67e-32 EPHA1,FC=-0.05,p=0.57667984

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    Array CGH Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

RP11-269N18, 22/50, 0.44 RP11-269N18, 0/50, 0 RP5-886O8, 3/50, 0.06 RP5-886O8, 3/50, 0.06 RP5-1173P7, 6/50, 0.12 RP5-1173P7, 6/50, 0.12 RP11-237G17, 13/50, 0.26 RP11-237G17, 4/50, 0.08 RP5-894A10, 5/50, 0.1 RP5-894A10, 4/50, 0.08 RP11-282G13, 4/50, 0.08 RP11-282G13, 4/50, 0.08

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    CGH Minimal Deletion Region Data        (help)      Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

PMID=15983384

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    LOH Frequency Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.

PMID=10987304 D7S684, 3/18, 17% D7S1824, 3/16, 19% PMID=15900585 D7S1824, 3/11, 27%

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