IGDB.NSCLC Chromosome View

Chromosome 7
7p22 7p21 7p15 7p14 7p13 7p12 7p11 7q11 7q21 7q22 7q31 7q32 7q33 7q34 7q35 7q36         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Move   
-
        
   Zoom

    Lung Cancer Genes with Experimental Evidence         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: up-regulation / green : down-regulation / gray : mutation)

IGFBP3, down, 42/74(57%) EGFR, up, 69/125(55%) EGFR, up, 92/167(55%) EGFR, up, 47/60(78%) EGFR, up, 86/172(50%) EGFR, up, 73/130(56%) EGFR, up, 31/96(32%) EGFR, up, 94/169(56%) EGFR, up, 66/111(59%) EGFR, up, 101/130(78%) EGFR, up, 20/30(67%) EGFR, up, 58/82(71%) EGFR, up, 121/200(61%) EGFR, up, 48/72(67%) EGFR, 34.22%, 4845/14158

(Click the gene to hyperlink to gene view.)    

    Gene Expression Microarray Data         (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        HG_U95 (Meyerson, GSE2514)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      NACAD,FC=-0.57,p=3.76e-05 RAMP3,FC=-1.65,p=7.21e-46 ADCY1,FC=0.09,p=0.321217578 ADCY1,FC=-0.17,p=0.36112454 IGFBP1,FC=0.10,p=0.553743839 IGFBP3,FC=1.56,p=6.93e-11 IGFBP3,FC=1.63,p=1.19e-11 HUS1,FC=0.25,p=0.167579361 UPP1,FC=0.17,p=0.254526614 ZPBP,FC=0.15,p=0.360746801 IKZF1,FC=-0.05,p=0.660276038 IKZF1,FC=-0.23,p=0.051615182 DDC,FC=0.52,p=0.09671798 GRB10,FC=-0.06,p=0.637619159 COBL,FC=-1.29,p=1.54e-08 SEC61G,FC=0.63,p=1.09e-06 EGFR,FC=-0.12,p=0.607573493 EGFR,FC=0.62,p=0.028878125 GBAS,FC=0.04,p=0.771800959 PSPH,FC=0.80,p=0.005669543 PSPH,FC=0.95,p=0.011404608 CCT6A,FC=0.25,p=0.033700638 PHKG1,FC=0.30,p=0.023512933 ZNF273,FC=0.73,p=0.001920133 ZNF117,FC=0.14,p=0.241799252 ZNF92,FC=0.36,p=0.06415824 GUSB,FC=0.23,p=0.010149625 ASL,FC=0.03,p=0.906086651

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      NACAD,FC=-0.59,p=0.010216716 RAMP3,FC=-1.82,p=1.07e-16 ADCY1,FC=-0.13,p=0.316110134 ADCY1,FC=0.04,p=0.873679172 IGFBP1,FC=-0.09,p=0.596183328 IGFBP3,FC=1.55,p=1.12e-06 IGFBP3,FC=1.38,p=3.62e-06 HUS1,FC=0.20,p=0.453392125 UPP1,FC=-0.49,p=0.014570532 ZPBP,FC=-0.06,p=0.76792784 IKZF1,FC=-0.17,p=0.209401433 IKZF1,FC=-0.39,p=0.006315701 DDC,FC=-0.21,p=0.287330101 GRB10,FC=0.10,p=0.503741415 COBL,FC=-3.00,p=4.67e-17 SEC61G,FC=0.50,p=0.0020429 EGFR,FC=0.37,p=0.147832839 EGFR,FC=1.07,p=0.004167734 GBAS,FC=-0.17,p=0.26316763 PSPH,FC=1.30,p=0.000483266 PSPH,FC=1.54,p=0.00146832 CCT6A,FC=0.43,p=0.000890324 PHKG1,FC=-0.30,p=0.122169585 ZNF273,FC=1.17,p=0.000195749 ZNF117,FC=-0.16,p=0.339284425 ZNF92,FC=0.09,p=0.753711615 GUSB,FC=-0.29,p=0.000511644 ASL,FC=-1.04,p=0.001033731


        HG_U133A (GSE7670, GSE17475, DCLungStudy, GSE4573, GSE10072)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      NACAD,FC=-0.46,p=4.6e-05 TBRG4,FC=0.67,p=5.35e-06 RAMP3,FC=-2.32,p=8.14e-107 ADCY1,FC=-0.12,p=0.185479747 ADCY1,FC=-0.20,p=0.153519823 IGFBP1,FC=0.47,p=0.014735001 IGFBP3,FC=1.51,p=8.65e-33 IGFBP3,FC=1.82,p=8.53e-38 TNS3,FC=-1.08,p=5.6e-45 C7orf69,FC=-0.15,p=0.185614586 HUS1,FC=1.95,p=1.44e-48 HUS1,FC=0.11,p=0.13645926 HUS1,FC=0.17,p=0.091709694 UPP1,FC=0.22,p=0.073871951 ZPBP,FC=0.42,p=0.001138028 IKZF1,FC=-0.14,p=0.061877159 IKZF1,FC=-0.18,p=0.132905329 IKZF1,FC=0.15,p=0.289287756 DDC,FC=-0.47,p=0.041717439 DDC,FC=0.23,p=0.191388526 GRB10,FC=0.47,p=4.25e-06 GRB10,FC=0.30,p=3.6e-06 GRB10,FC=-0.27,p=0.00226419 GRB10,FC=0.03,p=0.848653006 COBL,FC=-1.05,p=1.62e-11 SEC61G,FC=0.97,p=8.85e-43 EGFR,FC=0.22,p=0.058342933 EGFR,FC=-0.29,p=7.03e-05 EGFR,FC=0.14,p=0.33479461 EGFR,FC=0.07,p=0.62967159 EGFR,FC=0.05,p=0.36279473 EGFR,FC=0.01,p=0.971040267 LANCL2,FC=0.45,p=9.01e-10 MRPS17,FC=0.76,p=2.9e-29 GBAS,FC=0.29,p=0.000975569 PSPH,FC=0.98,p=0.000499988 PSPH,FC=0.96,p=4.71e-18 CCT6A,FC=1.02,p=1.55e-42 CCT6A,FC=0.44,p=5.08e-07 PHKG1,FC=-0.45,p=3.13e-07 CHCHD2,FC=0.36,p=3.16e-10 ZNF107,FC=0.80,p=4.46e-10 ZNF273,FC=0.24,p=0.00051876 ZNF117,FC=0.52,p=0.000113056 ZNF117,FC=0.72,p=8.88e-12 GUSB,FC=0.30,p=0.000105042 ASL,FC=0.08,p=0.287739802 ASL,FC=0.04,p=0.522526714 ASL,FC=0.64,p=1.62e-24

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      NACAD,FC=1.65,p=1.62e-25 TBRG4,FC=-3.50,p=1.63e-77 RAMP3,FC=-3.81,p=1.02e-83 ADCY1,FC=2.18,p=1.47e-44 ADCY1,FC=0.82,p=9.3e-08 IGFBP1,FC=2.59,p=1.5e-46 IGFBP3,FC=-0.82,p=1.1e-11 IGFBP3,FC=-1.25,p=1.07e-09 TNS3,FC=-3.53,p=3.14e-111 C7orf69,FC=3.93,p=3.03e-99 HUS1,FC=1.83,p=3.62e-21 HUS1,FC=-3.07,p=7.2e-103 HUS1,FC=1.76,p=4.04e-20 UPP1,FC=0.67,p=4.39e-11 ZPBP,FC=2.15,p=6.31e-38 IKZF1,FC=-3.70,p=1.08e-69 IKZF1,FC=1.31,p=6.63e-34 IKZF1,FC=0.63,p=0.000128043 DDC,FC=1.67,p=2.31e-36 DDC,FC=0.26,p=0.011092159 GRB10,FC=2.39,p=6.53e-80 GRB10,FC=-0.35,p=4.09e-05 GRB10,FC=-0.54,p=1.69e-13 GRB10,FC=1.25,p=5.51e-23 COBL,FC=-0.59,p=3.59e-10 SEC61G,FC=-1.31,p=2.67e-16 EGFR,FC=2.59,p=9.31e-112 EGFR,FC=7.56,p=1.8e-194 EGFR,FC=4.62,p=1.43e-110 EGFR,FC=-3.65,p=1.38e-101 EGFR,FC=-1.24,p=1.07e-46 EGFR,FC=3.51,p=1.13e-36 LANCL2,FC=1.22,p=1.82e-41 MRPS17,FC=-0.73,p=1.88e-27 GBAS,FC=-0.06,p=0.488482977 PSPH,FC=1.69,p=2.85e-07 PSPH,FC=2.32,p=1.98e-45 CCT6A,FC=1.80,p=2.32e-76 CCT6A,FC=0.01,p=0.899826995 PHKG1,FC=0.88,p=1.56e-15 CHCHD2,FC=-6.99,p=3.46e-144 ZNF107,FC=2.77,p=4.31e-41 ZNF273,FC=2.12,p=1.24e-63 ZNF117,FC=-3.12,p=5.78e-51 ZNF117,FC=-1.76,p=9.35e-28 GUSB,FC=-2.11,p=1.37e-69 ASL,FC=-0.77,p=8.38e-14 ASL,FC=0.83,p=5.89e-25 ASL,FC=0.20,p=0.068047381


        HG_U133_Plus2 (GSE3141, GSE10245, GSE10445, GSE12667, GSE10799, GSE16538, GSE7307, GSE3526)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      CCM2,FC=0.40,p=9.61e-07 NACAD,FC=-1.17,p=1.88e-09 TBRG4,FC=0.93,p=5.13e-08 RAMP3,FC=-2.51,p=5.47e-46 ADCY1,FC=0.13,p=0.490466565 ADCY1,FC=0.87,p=6.64e-08 ADCY1,FC=0.07,p=0.681093619 ADCY1,FC=0.02,p=0.917949412 SEPT13,FC=0.19,p=0.04119021 SEPT13,FC=-0.42,p=0.000619653 IGFBP1,FC=0.41,p=0.162062044 IGFBP3,FC=1.90,p=1.43e-24 IGFBP3,FC=1.86,p=1.8e-27 ATP5SL,FC=-1.84,p=1.86e-38 TNS3,FC=0.44,p=0.020855561 TNS3,FC=-0.68,p=6.32e-18 PKD1L1,FC=0.22,p=0.25128893 C7orf69,FC=0.15,p=0.410587047 HUS1,FC=0.34,p=0.027016397 HUS1,FC=0.14,p=0.19452623 HUS1,FC=0.52,p=1.65e-09 SUNC1,FC=0.60,p=0.008506763 C7orf57,FC=-0.83,p=0.002924035 UPP1,FC=-0.14,p=0.281535384 ABCA13,FC=-0.40,p=0.222064276 ABCA13,FC=-0.43,p=0.101473853 ABCA13,FC=-0.11,p=0.67532459 ZPBP,FC=-0.25,p=0.178540464 IKZF1,FC=-0.84,p=2.56e-09 IKZF1,FC=-0.07,p=0.583327777 IKZF1,FC=-0.75,p=1.29e-06 IKZF1,FC=0.45,p=0.034627091 IKZF1,FC=0.06,p=0.776893808 IKZF1,FC=0.37,p=0.085805426 IKZF1,FC=-0.61,p=1.08e-07 FIGNL1,FC=1.09,p=1.02e-16 FIGNL1,FC=0.97,p=5e-21 DDC,FC=-1.04,p=0.002271502 DDC,FC=0.23,p=0.339037619 DDC,FC=-0.24,p=0.20809301 GRB10,FC=0.24,p=0.021172491 GRB10,FC=0.12,p=0.32910925 GRB10,FC=0.10,p=0.369098495 GRB10,FC=-0.71,p=7.68e-05 COBL,FC=-1.26,p=2.54e-10 COBL,FC=-0.16,p=0.435169248 COBL,FC=-1.47,p=1.33e-08 PELO,FC=-1.42,p=4.17e-37 POM121L12,FC=0.56,p=0.001732865 POM121L12,FC=1.01,p=1.1e-05 VSTM2A,FC=0.09,p=0.583792318 VSTM2A,FC=0.47,p=0.035445576 SEC61G,FC=0.68,p=1.75e-16 TCEA1,FC=-0.21,p=0.261490497 EGFR,FC=-0.46,p=0.055331971 EGFR,FC=-0.66,p=0.000325503 EGFR,FC=0.01,p=0.958697235 EGFR,FC=0.29,p=0.175864536 EGFR,FC=1.17,p=2.7e-05 EGFR,FC=0.90,p=2.23e-05 EGFR,FC=-0.36,p=0.027892368 EGFR,FC=0.42,p=0.001682164 EGFR,FC=0.50,p=0.027854343 EGFR,FC=0.34,p=0.000120822 EGFR,FC=0.46,p=0.00026381 LANCL2,FC=-0.29,p=0.00010867 LANCL2,FC=-0.02,p=0.925272289 LANCL2,FC=0.28,p=0.001387461 ZNF713,FC=-0.37,p=0.090980599 MRPS17,FC=0.96,p=3.85e-24 GBAS,FC=0.61,p=0.000291498 GBAS,FC=-0.03,p=0.744369434 PSPH,FC=0.93,p=0.003357336 PSPH,FC=1.11,p=1.86e-07 PSPH,FC=1.10,p=5.85e-20 CCT6A,FC=0.41,p=4.52e-08 CCT6A,FC=0.50,p=4.5e-09 SUMF2,FC=0.98,p=1.14e-19 PHKG1,FC=0.40,p=0.036820034 CHCHD2,FC=0.57,p=2.33e-18 GTPBP5,FC=-0.01,p=0.970165301 ZNF583,FC=0.21,p=0.322368348 DPY19L2,FC=-0.06,p=0.787103321 ZNF680,FC=0.38,p=0.001841857 ZNF107,FC=-0.40,p=0.098801127 ZNF107,FC=0.96,p=8.59e-08 ZNF107,FC=0.56,p=1.48e-06 ZNF138,FC=0.87,p=1.9e-22 ZNF273,FC=0.48,p=0.00776581 ZNF273,FC=0.24,p=0.006726004 ZNF117,FC=1.06,p=1.8e-05 ZNF117,FC=0.26,p=0.127064422 ZNF117,FC=-0.02,p=0.927902223 ZNF117,FC=0.56,p=1.97e-05 ZNF92,FC=0.49,p=4.5e-05 ZNF92,FC=0.48,p=0.035428593 ZNF92,FC=0.45,p=0.01260508 VKORC1L1,FC=0.50,p=0.000371583 GUSB,FC=0.15,p=0.054755518 ASL,FC=0.61,p=5.42e-09 ASL,FC=0.60,p=2.54e-14 ASL,FC=-0.07,p=0.422641163

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      CCM2,FC=0.22,p=0.011211389 NACAD,FC=-0.89,p=6.29e-06 TBRG4,FC=0.89,p=4.67e-06 RAMP3,FC=-2.17,p=7.66e-24 ADCY1,FC=-0.31,p=0.074417504 ADCY1,FC=1.21,p=3.89e-09 ADCY1,FC=0.02,p=0.941051665 ADCY1,FC=-0.01,p=0.949995863 SEPT13,FC=-0.03,p=0.801756804 SEPT13,FC=-0.39,p=0.000606704 IGFBP1,FC=-0.32,p=0.223816446 IGFBP3,FC=2.68,p=5e-29 IGFBP3,FC=2.31,p=1.2e-22 ATP5SL,FC=-2.16,p=1.52e-29 TNS3,FC=0.67,p=0.001819187 TNS3,FC=-1.45,p=1.44e-23 PKD1L1,FC=1.18,p=2.78e-08 C7orf69,FC=0.10,p=0.611055614 HUS1,FC=0.45,p=0.001399051 HUS1,FC=0.04,p=0.750024753 HUS1,FC=0.58,p=2.79e-09 SUNC1,FC=-0.01,p=0.947934699 C7orf57,FC=-2.67,p=6.42e-14 UPP1,FC=-0.52,p=0.000450183 ABCA13,FC=1.84,p=3.72e-06 ABCA13,FC=1.39,p=3.36e-06 ABCA13,FC=1.58,p=2.3e-05 ZPBP,FC=0.28,p=0.165723315 IKZF1,FC=-1.68,p=8.72e-12 IKZF1,FC=-0.69,p=6.39e-05 IKZF1,FC=-1.55,p=1.64e-12 IKZF1,FC=0.36,p=0.129674055 IKZF1,FC=0.04,p=0.862694067 IKZF1,FC=-0.36,p=0.101452112 IKZF1,FC=-1.03,p=2.16e-11 FIGNL1,FC=1.34,p=7.81e-15 FIGNL1,FC=1.07,p=2.74e-15 DDC,FC=-2.47,p=6.32e-17 DDC,FC=-0.39,p=0.05264569 DDC,FC=0.05,p=0.832870092 GRB10,FC=0.61,p=3.69e-07 GRB10,FC=0.26,p=0.070062517 GRB10,FC=0.09,p=0.390904183 GRB10,FC=-0.85,p=6.24e-08 COBL,FC=-2.99,p=6.35e-30 COBL,FC=-0.93,p=1.12e-06 COBL,FC=-3.84,p=3.18e-33 PELO,FC=-1.69,p=8.08e-32 POM121L12,FC=0.96,p=4.86e-07 POM121L12,FC=1.72,p=2.58e-09 VSTM2A,FC=0.02,p=0.892396871 VSTM2A,FC=0.64,p=0.009424857 SEC61G,FC=0.85,p=1.14e-17 TCEA1,FC=-0.59,p=0.002706796 EGFR,FC=-0.56,p=0.010394364 EGFR,FC=-0.53,p=0.015904522 EGFR,FC=0.18,p=0.230181892 EGFR,FC=0.41,p=0.089047723 EGFR,FC=1.21,p=3.45e-06 EGFR,FC=1.13,p=1.19e-06 EGFR,FC=0.28,p=0.102846725 EGFR,FC=1.27,p=1.19e-13 EGFR,FC=0.65,p=0.012462796 EGFR,FC=0.34,p=0.001910324 EGFR,FC=0.86,p=2.32e-08 LANCL2,FC=-0.11,p=0.196439835 LANCL2,FC=0.14,p=0.484975722 LANCL2,FC=0.57,p=2.48e-06 ZNF713,FC=-1.14,p=1.42e-05 MRPS17,FC=1.18,p=3.75e-21 GBAS,FC=0.62,p=0.001168185 GBAS,FC=-0.30,p=0.005631731 PSPH,FC=1.61,p=8.38e-06 PSPH,FC=1.28,p=7.23e-07 PSPH,FC=1.79,p=5.61e-20 CCT6A,FC=0.74,p=1.77e-11 CCT6A,FC=0.71,p=9.23e-11 SUMF2,FC=0.74,p=1.88e-09 PHKG1,FC=1.26,p=3.5e-09 CHCHD2,FC=0.74,p=7.23e-21 GTPBP5,FC=0.18,p=0.305191814 ZNF583,FC=0.84,p=0.000359868 DPY19L2,FC=0.07,p=0.761489118 ZNF680,FC=0.06,p=0.689241214 ZNF107,FC=0.25,p=0.382525056 ZNF107,FC=1.36,p=1.66e-09 ZNF107,FC=0.52,p=1.59e-05 ZNF138,FC=0.92,p=4.84e-17 ZNF273,FC=0.89,p=0.000134682 ZNF273,FC=0.53,p=5.13e-06 ZNF117,FC=1.18,p=1.22e-06 ZNF117,FC=-0.41,p=0.00537526 ZNF117,FC=-1.04,p=0.000232735 ZNF117,FC=0.51,p=0.000133942 ZNF92,FC=0.14,p=0.299783947 ZNF92,FC=0.18,p=0.504545385 ZNF92,FC=0.21,p=0.348777049 VKORC1L1,FC=-0.08,p=0.60950843 GUSB,FC=-0.20,p=0.019289719 ASL,FC=0.65,p=5.27e-11 ASL,FC=0.90,p=1.98e-19 ASL,FC=-0.89,p=6.77e-14


        Stanford (GSE3398)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      ADCY1,FC=-0.07,p=0.870250029 IGFBP1,FC=-1.97,p=0.003957408 IGFBP1,FC=-0.81,p=0.321789433 IGFBP3,FC=2.37,p=3.9e-05 ZPBP,FC=-1.05,p=0.041146063 DDC,FC=0.32,p=0.564490808 GRB10,FC=0.34,p=0.398656649 SEC61G,FC=0.60,p=0.133444861 EGFR,FC=-0.22,p=0.477131183 EGFR,FC=0.19,p=0.764737625 EGFR,FC=0.32,p=0.613736886 PSPH,FC=0.70,p=0.022572284 CCT6A,FC=-1.31,p=1.15e-05 CCT6A,FC=1.09,p=0.000356403 CCT6A,FC=1.00,p=0.005649431 ZNF273,FC=1.21,p=0.039352199 ZNF117,FC=1.03,p=0.01625243 GUSB,FC=0.09,p=0.797964891 ASL,FC=-0.19,p=0.354842819

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      ADCY1,FC=-0.24,p=0.582517829 IGFBP1,FC=-1.25,p=0.093006312 IGFBP1,FC=0.29,p=0.652986205 IGFBP3,FC=2.26,p=0.000146699 ZPBP,FC=-0.62,p=0.163601159 DDC,FC=0.15,p=0.804856146 GRB10,FC=0.27,p=0.415522226 SEC61G,FC=0.63,p=0.041139429 EGFR,FC=-0.35,p=0.509777198 EGFR,FC=0.30,p=0.461800626 EGFR,FC=0.63,p=0.108025189 PSPH,FC=0.98,p=0.002832394 CCT6A,FC=-1.08,p=8.67e-05 CCT6A,FC=0.99,p=0.008050117 CCT6A,FC=0.98,p=0.004642733 ZNF273,FC=0.85,p=0.045165333 ZNF117,FC=0.91,p=0.174191327 GUSB,FC=-0.50,p=0.067959499 ASL,FC=-0.55,p=0.022342396


        Agilent_HS_21.6K (GSE11969)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      CCM2,FC=-0.10,p=0.196830423 CCM2,FC=0.07,p=0.19972616 TBRG4,FC=0.14,p=0.053759598 RAMP3,FC=-0.38,p=1e-15 ADCY1,FC=0.04,p=0.049676356 ADCY1,FC=0.01,p=0.748524653 IGFBP1,FC=0.11,p=0.043277998 IGFBP3,FC=0.33,p=0.024115108 PKD1L1,FC=0.27,p=0.001063141 HUS1,FC=0.03,p=0.024370664 SUNC1,FC=0.04,p=0.754377633 UPP1,FC=-0.06,p=0.54074574 UPP1,FC=-0.08,p=0.119328983 ABCA13,FC=-0.01,p=0.836306403 ABCA13,FC=0.02,p=0.730663673 ZPBP,FC=-0.10,p=0.001208668 FIGNL1,FC=0.05,p=0.111890023 DDC,FC=0.07,p=0.400753844 GRB10,FC=0.17,p=2.07e-05 GRB10,FC=-0.06,p=0.652148314 SEC61G,FC=0.20,p=0.056691356 EGFR,FC=0.03,p=0.46125061 LANCL2,FC=0.03,p=0.706346524 MRPS17,FC=0.34,p=0.006268589 GBAS,FC=0.22,p=0.010665865 PSPH,FC=0.33,p=0.009735997 CCT6A,FC=0.32,p=0.002911463 SUMF2,FC=-0.06,p=0.024029613 CHCHD2,FC=0.34,p=0.001881054 ZNF138,FC=0.06,p=0.065966467 ZNF138,FC=-0.31,p=0.003149143 ZNF273,FC=-0.00,p=0.973547305 ZNF117,FC=-0.05,p=0.328525785 ZNF92,FC=0.29,p=0.000649923 VKORC1L1,FC=0.03,p=0.627067703 GUSB,FC=-0.14,p=0.019207279 ASL,FC=-0.20,p=0.002188454

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      CCM2,FC=-0.11,p=0.081574985 CCM2,FC=0.07,p=0.25986614 TBRG4,FC=0.23,p=0.001267941 RAMP3,FC=-0.38,p=2.97e-17 ADCY1,FC=0.04,p=0.104600408 ADCY1,FC=-0.04,p=0.289528637 IGFBP1,FC=0.08,p=0.026454696 IGFBP3,FC=0.56,p=0.003210511 PKD1L1,FC=0.28,p=0.000780751 HUS1,FC=0.05,p=0.019000999 SUNC1,FC=-0.05,p=0.667653222 UPP1,FC=-0.07,p=0.531944911 UPP1,FC=-0.08,p=0.195786059 ABCA13,FC=0.01,p=0.588474717 ABCA13,FC=0.17,p=0.015662706 ZPBP,FC=-0.13,p=0.00058928 FIGNL1,FC=0.07,p=0.022930533 DDC,FC=0.05,p=0.4799656 GRB10,FC=0.16,p=0.000334413 GRB10,FC=0.03,p=0.864335713 SEC61G,FC=0.24,p=0.000734696 EGFR,FC=0.03,p=0.484948803 LANCL2,FC=0.12,p=0.119881119 MRPS17,FC=0.44,p=1.46e-05 GBAS,FC=0.14,p=0.007448561 PSPH,FC=0.35,p=0.019123661 CCT6A,FC=0.44,p=3.01e-07 SUMF2,FC=-0.09,p=0.002049787 CHCHD2,FC=0.35,p=4.7e-06 ZNF138,FC=0.05,p=0.116329316 ZNF138,FC=-0.33,p=0.004674381 ZNF273,FC=0.04,p=0.307508575 ZNF117,FC=-0.13,p=0.029469251 ZNF92,FC=0.30,p=8e-05 VKORC1L1,FC=-0.04,p=0.424288933 GUSB,FC=-0.23,p=0.000156108 ASL,FC=-0.33,p=0.000841739


< Top >


    Copy Number Alteration Data        (help)
            ( red: amplification / green : deletion)

         Adenocarcinoma          Squamous Cell Carcinoma
        Meyerson Adenocarcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE17958 Squamous Cell Carcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE12280_SGOL (SCC / aCGH)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

      

< Top >


    miRNA Expression Data        (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        GSE15201
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        GSE18692
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picture,Mean=0.00

< Top >


    Paired (U133A/aCGH) AD Sample Data        (help) (PubMed)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

NACAD,FC=-0.22,p=0.129661843 TBRG4,FC=0.55,p=0.001390719 RAMP3,FC=-2.27,p=3.9e-64 ADCY1,FC=-0.31,p=0.00064265 ADCY1,FC=-0.23,p=0.113001784 IGFBP1,FC=0.33,p=0.119529473 IGFBP3,FC=1.39,p=2.43e-23 IGFBP3,FC=1.58,p=6.63e-24 TNS3,FC=-1.17,p=4.26e-44 C7orf69,FC=0.21,p=0.090392687 HUS1,FC=2.18,p=1.02e-48 HUS1,FC=0.19,p=0.01512191 HUS1,FC=0.32,p=0.002149024 UPP1,FC=0.24,p=0.032776433 ZPBP,FC=-0.08,p=0.650975937 IKZF1,FC=0.13,p=0.096919968 IKZF1,FC=-0.27,p=0.030370911 IKZF1,FC=0.40,p=0.00926914 DDC,FC=-0.92,p=7.41e-05 DDC,FC=0.11,p=0.512573314 GRB10,FC=0.30,p=0.006582482 GRB10,FC=0.18,p=0.006970893 GRB10,FC=-0.32,p=0.000347952 GRB10,FC=0.26,p=0.122541261 COBL,FC=-1.21,p=2e-11 SEC61G,FC=0.78,p=5.32e-27 EGFR,FC=0.28,p=0.02241963 EGFR,FC=-0.57,p=1.64e-10 EGFR,FC=0.49,p=0.002863402 EGFR,FC=0.48,p=0.001370492 EGFR,FC=-0.32,p=0.000944635 EGFR,FC=0.21,p=0.261609898 LANCL2,FC=0.40,p=1.62e-06 MRPS17,FC=0.62,p=6.58e-19 GBAS,FC=0.51,p=1.84e-09 PSPH,FC=1.34,p=5.08e-05 PSPH,FC=1.20,p=1.02e-17 CCT6A,FC=0.93,p=6.23e-32 CCT6A,FC=0.45,p=9.35e-08 PHKG1,FC=-0.63,p=1.18e-08 CHCHD2,FC=0.26,p=7.52e-06 ZNF107,FC=0.99,p=1.99e-21 ZNF273,FC=0.38,p=1.06e-06 ZNF117,FC=0.90,p=2.52e-09 ZNF117,FC=0.98,p=3.93e-18 GUSB,FC=0.39,p=8.49e-08 ASL,FC=0.06,p=0.428685025 ASL,FC=0.11,p=0.107318077 ASL,FC=0.85,p=2.25e-27

< Top >


    Array CGH Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

RP11-111G20, 2/50, 0.04 RP11-111G20, 1/50, 0.02 RP11-132L11, 4/50, 0.08 RP11-132L11, 2/50, 0.04 RP11-571N3, 3/50, 0.06 RP11-571N3, 2/50, 0.04 RP11-95J15, 4/50, 0.08 RP11-95J15, 4/50, 0.08 RP11-21H20, 10/50, 0.2 RP11-21H20, 0/50, 0 RP4-815D20, 3/50, 0.06 RP4-815D20, 7/50, 0.14 RP11-127A24, 7/50, 0.14 RP11-127A24, 7/50, 0.14 RP11-95E2, 2/50, 0.04 RP11-95E2, 1/50, 0.02 RP4-718N17, 3/50, 0.06 RP4-718N17, 7/50, 0.14 RP11-324M21, 4/50, 0.08 RP11-324M21, 2/50, 0.04 RP11-449G3, 8/50, 0.16 RP11-449G3, 3/50, 0.06 RP5-1091E12, 7/50, 0.14 RP5-1091E12, 4/50, 0.08 RP11-339F13, 11/50, 0.22 RP11-339F13, 2/50, 0.04 RP4-725G10, 7/50, 0.14 RP4-725G10, 0/50, 0 RP11-10F11, 8/50, 0.16 RP11-10F11, 4/50, 0.08 RP5-905H7, 13/50, 0.26 RP5-905H7, 3/50, 0.06 RP11-340I6, 8/50, 0.16 RP11-340I6, 0/50, 0 RP11-479O9, 13/50, 0.26 RP11-479O9, 4/50, 0.08

< Top >


    CGH Minimal Deletion Region Data        (help)      Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

PMID=11391799 PMID=11748636 PMID=12367789 PMID=12599234 PMID=14581340 PMID=15093586 PMID=15093586 PMID=16322280 PMID=16322280 PMID=9591638

< Top >


    LOH Frequency Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.

Our unpublished data D7S1818, 20/29, 69% Our unpublished data D7S506, 11/20, 55% Our unpublished data D7S2475, 14/31, 45% Our unpublished data D7S2550, 19/35, 54% Our unpublished data D7S659, 18/45, 40% Our unpublished data D7S2429, 18/37, 49% PMID=10987304 D7S519, 0/16, 0% D7S1818, 2/11, 18% PMID=15900585 D7S1818, 3/12, 25%

< Top >


Download all image files.
Save all PNG files.    Save all PDF files.    Save all PS files.