IGDB.NSCLC Chromosome View

Chromosome 13
13p13 13p12 13p11 13q11 13q12 13q13 13q14 13q21 13q22 13q31 13q32 13q33 13q34         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
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    Lung Cancer Genes with Experimental Evidence         (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: up-regulation / green : down-regulation / gray : mutation)

, , STK24, 0.50%, 1/202

(Click the gene to hyperlink to gene view.)    

    Gene Expression Microarray Data         (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        HG_U95 (Meyerson, GSE2514)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLITRK5,FC=-0.19,p=0.40333204 GPC5,FC=0.03,p=0.919969172 TGDS,FC=0.25,p=0.412208651 TGDS,FC=0.47,p=3.29e-09 SOX21,FC=0.70,p=0.000681961 ABCC4,FC=-0.03,p=0.878434765 ABCC4,FC=-0.21,p=0.404169603 CLDN10,FC=1.93,p=1.18e-05 DZIP1,FC=-1.38,p=1.74e-08 DNAJC3,FC=0.64,p=0.001722884 MBNL2,FC=-0.07,p=0.673701138 RAP2A,FC=0.02,p=0.842853979 RAP2A,FC=-0.59,p=0.009906226 RAP2A,FC=-0.79,p=0.000208394 RAP2A,FC=-1.02,p=1.36e-06 IPO5,FC=-0.15,p=0.287962331 FARP1,FC=-0.61,p=3.77e-09 FARP1,FC=0.28,p=0.209402091 STK24,FC=0.08,p=0.406679044 SLC15A1,FC=-0.05,p=0.841495428 SLC15A1,FC=0.23,p=0.361671358 DOCK9,FC=-1.75,p=4.38e-10 GPR18,FC=0.13,p=0.298220678 GPR18,FC=0.21,p=0.225045996 GPR183,FC=-0.40,p=0.15055745 TM9SF2,FC=-0.19,p=0.028758689 ZIC2,FC=-0.14,p=0.18910301 ZIC2,FC=0.33,p=0.039689403 PCCA,FC=-0.34,p=0.063336077 PCCA,FC=-0.28,p=0.204302869

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLITRK5,FC=-0.19,p=0.517742412 GPC5,FC=0.01,p=0.974652643 TGDS,FC=-0.04,p=0.925792059 TGDS,FC=0.33,p=0.007011872 SOX21,FC=1.46,p=1.53e-06 ABCC4,FC=-1.07,p=7.59e-05 ABCC4,FC=-0.66,p=0.042335461 CLDN10,FC=2.22,p=2.95e-05 DZIP1,FC=-0.55,p=0.075537045 DNAJC3,FC=0.07,p=0.817637967 MBNL2,FC=-1.25,p=0.000902998 RAP2A,FC=0.03,p=0.801549057 RAP2A,FC=-0.80,p=0.009439935 RAP2A,FC=-1.47,p=2.06e-05 RAP2A,FC=-1.42,p=1.99e-05 IPO5,FC=-0.05,p=0.744412654 FARP1,FC=-0.66,p=3.36e-07 FARP1,FC=0.55,p=0.052366614 STK24,FC=0.31,p=0.003917486 SLC15A1,FC=-0.41,p=0.273345439 SLC15A1,FC=0.18,p=0.626003537 DOCK9,FC=-2.35,p=1.4e-10 GPR18,FC=0.42,p=0.002767635 GPR18,FC=0.55,p=0.02284944 GPR183,FC=-0.70,p=0.026679549 TM9SF2,FC=-0.40,p=0.000865058 ZIC2,FC=-0.15,p=0.342335127 ZIC2,FC=0.96,p=0.000734407 PCCA,FC=-1.11,p=0.000178356 PCCA,FC=-0.58,p=0.010965526


        HG_U133A (GSE7670, GSE17475, DCLungStudy, GSE4573, GSE10072)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLITRK5,FC=0.23,p=0.141679616 GPC5,FC=-0.93,p=2.28e-08 DCT,FC=0.08,p=0.615629391 DCT,FC=0.27,p=0.005106911 DCT,FC=-0.26,p=1.47e-08 TGDS,FC=0.16,p=0.000772102 SOX21,FC=-0.37,p=0.000294859 ABCC4,FC=-0.25,p=0.033781082 CLDN10,FC=1.07,p=1.55e-08 DZIP1,FC=-0.31,p=6.16e-07 DZIP1,FC=-1.31,p=1.46e-10 DNAJC3,FC=0.99,p=3.2e-19 UGGT2,FC=0.31,p=3.91e-05 MBNL2,FC=-0.57,p=4.67e-09 MBNL2,FC=0.23,p=0.092587071 MBNL2,FC=-0.15,p=0.346459787 RAP2A,FC=-0.46,p=4.5e-08 IPO5,FC=0.17,p=0.012393462 IPO5,FC=-0.00,p=0.944433036 IPO5,FC=-0.50,p=9.34e-10 IPO5,FC=0.05,p=0.572426884 FARP1,FC=-0.12,p=0.111483255 FARP1,FC=-0.79,p=9.29e-21 STK24,FC=0.01,p=0.935111394 STK24,FC=0.04,p=0.40466981 STK24,FC=0.38,p=4.2e-09 SLC15A1,FC=-0.27,p=0.000733611 SLC15A1,FC=0.10,p=0.575172967 DOCK9,FC=-0.48,p=0.000506204 DOCK9,FC=0.26,p=0.021184597 DOCK9,FC=-0.42,p=0.002471078 DOCK9,FC=-0.64,p=5.74e-06 DOCK9,FC=-1.22,p=3.78e-23 GPR18,FC=-0.14,p=0.343012162 GPR183,FC=-0.17,p=0.193702246 TM9SF2,FC=0.50,p=1.35e-12 PCCA,FC=0.43,p=0.010376742 PCCA,FC=0.34,p=0.004521217

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLITRK5,FC=0.79,p=7.96e-21 GPC5,FC=1.97,p=2.96e-35 DCT,FC=1.17,p=2.15e-12 DCT,FC=0.75,p=1.85e-11 DCT,FC=0.34,p=0.042787681 TGDS,FC=-1.19,p=3.48e-43 SOX21,FC=-1.08,p=1.55e-18 ABCC4,FC=1.94,p=1.69e-80 CLDN10,FC=0.36,p=7.89e-09 DZIP1,FC=0.08,p=0.118339352 DZIP1,FC=3.67,p=1.53e-72 DNAJC3,FC=4.53,p=3e-104 UGGT2,FC=1.05,p=1.25e-32 MBNL2,FC=-1.60,p=3.26e-37 MBNL2,FC=1.76,p=6.49e-29 MBNL2,FC=0.05,p=0.752751319 RAP2A,FC=-2.56,p=6.29e-72 IPO5,FC=-1.46,p=6.31e-61 IPO5,FC=-3.98,p=1.55e-90 IPO5,FC=-4.86,p=2.88e-130 IPO5,FC=0.71,p=5.7e-18 FARP1,FC=-1.89,p=3.5e-80 FARP1,FC=-2.38,p=2.45e-69 STK24,FC=-1.84,p=3.45e-26 STK24,FC=1.65,p=4.95e-43 STK24,FC=-6.54,p=1e-140 SLC15A1,FC=3.77,p=4.18e-90 SLC15A1,FC=3.58,p=2.09e-74 DOCK9,FC=0.43,p=0.014212574 DOCK9,FC=3.06,p=2.35e-55 DOCK9,FC=1.97,p=3.47e-43 DOCK9,FC=3.03,p=1.42e-70 DOCK9,FC=0.70,p=1.56e-14 GPR18,FC=0.95,p=1.78e-12 GPR183,FC=-1.22,p=2.26e-07 TM9SF2,FC=-1.75,p=9.12e-53 PCCA,FC=2.88,p=7.58e-41 PCCA,FC=1.70,p=1.53e-55


        HG_U133_Plus2 (GSE3141, GSE10245, GSE10445, GSE12667, GSE10799, GSE16538, GSE7307, GSE3526)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLITRK1,FC=0.61,p=0.001688111 SLITRK6,FC=0.21,p=0.487147321 SLITRK6,FC=0.50,p=0.050448862 SLITRK6,FC=-0.03,p=0.914943088 SLITRK5,FC=-0.40,p=0.095035944 GPC5,FC=-1.89,p=4.96e-15 GPC5,FC=-0.11,p=0.553306792 GPC5,FC=0.38,p=0.089029982 GPC6,FC=0.48,p=0.016477512 GPC6,FC=0.98,p=2.3e-06 GPC6,FC=0.36,p=0.075458269 GPC6,FC=-0.01,p=0.971399427 GPC6,FC=0.71,p=0.000902846 GPC6,FC=1.23,p=3.76e-05 DCT,FC=0.18,p=0.364842235 DCT,FC=0.92,p=5.44e-06 DCT,FC=0.26,p=0.115139149 TGDS,FC=0.44,p=0.003200414 TGDS,FC=0.25,p=0.002238104 GPR180,FC=0.72,p=7.1e-05 GPR180,FC=0.59,p=8.64e-10 SOX21,FC=-0.20,p=0.260408295 ABCC4,FC=-0.06,p=0.744269927 ABCC4,FC=0.43,p=0.015062546 ABCC4,FC=-5.05,p=1.43e-41 ABCC4,FC=-0.35,p=0.015708326 ABCC4,FC=0.54,p=0.0006125 CLDN10,FC=1.95,p=2.22e-12 DZIP1,FC=-1.07,p=3.65e-11 DZIP1,FC=-0.51,p=1.36e-05 DNAJC3,FC=0.49,p=4.18e-05 DNAJC3,FC=-0.21,p=0.265549613 DNAJC3,FC=0.75,p=8.91e-08 UGGT2,FC=0.25,p=0.000984254 UGGT2,FC=-0.29,p=0.207269925 UGGT2,FC=0.29,p=0.026228823 UGGT2,FC=-0.19,p=0.224585713 UGGT2,FC=-0.08,p=0.520587459 UGGT2,FC=-0.32,p=0.062423087 UGGT2,FC=-0.47,p=0.017893309 HS6ST3,FC=-0.35,p=0.049274592 HS6ST3,FC=0.13,p=0.47405905 HS6ST3,FC=0.13,p=0.546968022 HS6ST3,FC=0.62,p=0.001598488 OXGR1,FC=-0.58,p=0.009896021 MBNL2,FC=-0.59,p=8.9e-05 MBNL2,FC=-0.76,p=1.79e-07 MBNL2,FC=-1.02,p=1.91e-11 MBNL2,FC=-0.61,p=3.36e-06 MBNL2,FC=-0.51,p=0.000174516 MBNL2,FC=-0.52,p=0.000205562 MBNL2,FC=-0.92,p=5.82e-18 MBNL2,FC=-0.13,p=0.483979271 MBNL2,FC=0.28,p=0.075921878 MBNL2,FC=0.17,p=0.424031182 RAP2A,FC=-0.46,p=2.62e-06 RAP2A,FC=-0.37,p=3.96e-05 IPO5,FC=-0.18,p=0.042127631 IPO5,FC=-0.41,p=3.42e-07 IPO5,FC=-0.11,p=0.12111948 IPO5,FC=-0.11,p=0.275693581 IPO5,FC=0.76,p=1.96e-07 FARP1,FC=-0.36,p=5.36e-05 FARP1,FC=0.60,p=0.004632641 FARP1,FC=-0.33,p=1.89e-05 FARP1,FC=0.60,p=2.09e-05 FARP1,FC=1.18,p=2.16e-16 FARP1,FC=-0.53,p=0.000521355 STK24,FC=0.37,p=3.51e-06 STK24,FC=-0.25,p=0.357358824 STK24,FC=0.40,p=5.32e-09 SLC15A1,FC=0.37,p=0.025290151 SLC15A1,FC=1.30,p=3.86e-08 DOCK9,FC=-0.43,p=0.008366577 DOCK9,FC=-1.26,p=3.76e-16 DOCK9,FC=0.67,p=0.000181386 DOCK9,FC=-1.19,p=4.83e-27 DOCK9,FC=0.15,p=0.426233947 DOCK9,FC=-1.60,p=2.56e-23 UBAC2,FC=-0.03,p=0.753503572 GPR18,FC=-0.04,p=0.8019636 GPR183,FC=-0.96,p=1.13e-08 TM9SF2,FC=0.31,p=5.72e-05 CLYBL,FC=0.05,p=0.77230451 CLYBL,FC=-0.03,p=0.78603946 CLYBL,FC=0.33,p=0.042628415 CLYBL,FC=-0.39,p=0.005013081 ZIC5,FC=-0.08,p=0.64681852 ZIC2,FC=1.38,p=1.18e-05 PCCA,FC=-0.21,p=0.12724054 PCCA,FC=-0.12,p=0.574277464 PCCA,FC=-0.34,p=0.001773211 A2LD1,FC=-0.02,p=0.922457655 A2LD1,FC=0.41,p=3.25e-06 TMTC4,FC=0.95,p=1.09e-20 TMTC4,FC=0.87,p=1.86e-17 TMTC4,FC=0.61,p=0.00155767 NALCN,FC=0.09,p=0.645143234 NALCN,FC=-0.46,p=0.00656442 NALCN,FC=0.19,p=0.251358038

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLITRK1,FC=0.88,p=4.97e-05 SLITRK6,FC=0.30,p=0.413928078 SLITRK6,FC=1.22,p=1.27e-05 SLITRK6,FC=0.61,p=0.022879654 SLITRK5,FC=-0.54,p=0.026494411 GPC5,FC=-2.51,p=1.78e-21 GPC5,FC=-0.21,p=0.334443319 GPC5,FC=0.57,p=0.022668096 GPC6,FC=0.58,p=0.006786445 GPC6,FC=0.42,p=0.08066147 GPC6,FC=-0.26,p=0.256910669 GPC6,FC=-0.31,p=0.142685131 GPC6,FC=0.18,p=0.404952152 GPC6,FC=0.42,p=0.14279237 DCT,FC=0.12,p=0.616950979 DCT,FC=1.65,p=3.21e-10 DCT,FC=0.73,p=9.55e-05 TGDS,FC=0.34,p=0.020657312 TGDS,FC=-0.00,p=0.976189135 GPR180,FC=0.17,p=0.426031632 GPR180,FC=0.55,p=1.77e-09 SOX21,FC=0.40,p=0.050396553 ABCC4,FC=0.01,p=0.945940532 ABCC4,FC=0.01,p=0.954838092 ABCC4,FC=-5.93,p=5.97e-49 ABCC4,FC=-0.69,p=5.52e-06 ABCC4,FC=0.32,p=0.031013643 CLDN10,FC=1.20,p=4.28e-08 DZIP1,FC=-0.41,p=0.003651222 DZIP1,FC=0.19,p=0.075550514 DNAJC3,FC=-0.23,p=0.138412814 DNAJC3,FC=-0.37,p=0.077729588 DNAJC3,FC=0.57,p=2.23e-07 UGGT2,FC=-0.29,p=0.029185722 UGGT2,FC=-1.13,p=4.38e-05 UGGT2,FC=-0.17,p=0.158503803 UGGT2,FC=-0.96,p=1.96e-06 UGGT2,FC=-0.22,p=0.031058512 UGGT2,FC=-0.95,p=1.9e-06 UGGT2,FC=-1.52,p=9.45e-10 HS6ST3,FC=-0.42,p=0.044071419 HS6ST3,FC=0.65,p=0.00155541 HS6ST3,FC=0.34,p=0.168279911 HS6ST3,FC=0.78,p=0.000778209 OXGR1,FC=0.89,p=0.000140902 MBNL2,FC=-1.41,p=1.64e-20 MBNL2,FC=-1.27,p=3.19e-14 MBNL2,FC=-1.96,p=6.33e-30 MBNL2,FC=-1.52,p=2.71e-19 MBNL2,FC=-1.29,p=9.5e-20 MBNL2,FC=-1.02,p=1.16e-11 MBNL2,FC=-1.67,p=4.62e-28 MBNL2,FC=-0.85,p=4.13e-06 MBNL2,FC=-0.08,p=0.677063828 MBNL2,FC=-0.53,p=0.01996958 RAP2A,FC=-0.71,p=9.9e-12 RAP2A,FC=-0.68,p=1.23e-09 IPO5,FC=-0.28,p=0.003334265 IPO5,FC=-0.31,p=8.82e-05 IPO5,FC=0.07,p=0.406567763 IPO5,FC=-0.23,p=0.015787746 IPO5,FC=1.23,p=2.94e-13 FARP1,FC=-0.25,p=0.016578556 FARP1,FC=-0.24,p=0.213734234 FARP1,FC=-0.20,p=0.034446028 FARP1,FC=0.12,p=0.394083389 FARP1,FC=0.89,p=5.42e-09 FARP1,FC=-0.64,p=6.07e-05 STK24,FC=0.73,p=9.91e-13 STK24,FC=0.12,p=0.558982928 STK24,FC=0.58,p=5.41e-18 SLC15A1,FC=1.11,p=3.47e-11 SLC15A1,FC=1.37,p=3.72e-08 DOCK9,FC=-0.50,p=0.007284553 DOCK9,FC=-1.53,p=1.52e-24 DOCK9,FC=0.73,p=0.000534906 DOCK9,FC=-1.67,p=1.3e-29 DOCK9,FC=0.50,p=0.029457083 DOCK9,FC=-2.14,p=1.06e-32 UBAC2,FC=-0.01,p=0.911124036 GPR18,FC=-0.83,p=1.45e-05 GPR183,FC=-1.89,p=1.66e-15 TM9SF2,FC=0.11,p=0.182839881 CLYBL,FC=0.63,p=0.001282146 CLYBL,FC=0.26,p=0.064050177 CLYBL,FC=0.21,p=0.257856051 CLYBL,FC=-0.37,p=0.00364914 ZIC5,FC=0.32,p=0.113615936 ZIC2,FC=3.95,p=9.15e-28 PCCA,FC=-0.44,p=0.000207938 PCCA,FC=-0.90,p=0.001139996 PCCA,FC=-0.54,p=0.000123208 A2LD1,FC=0.20,p=0.347257583 A2LD1,FC=0.57,p=8.47e-11 TMTC4,FC=0.83,p=1.91e-13 TMTC4,FC=1.06,p=1.63e-18 TMTC4,FC=0.14,p=0.547728842 NALCN,FC=0.34,p=0.147900983 NALCN,FC=-1.31,p=6.69e-10 NALCN,FC=0.25,p=0.23483224


        Stanford (GSE3398)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      GPC5,FC=-0.01,p=0.986117118 ABCC4,FC=-0.14,p=0.740338342 CLDN10,FC=0.89,p=0.093491531 CLDN10,FC=1.53,p=0.007985835 DNAJC3,FC=-0.25,p=0.578395185 DNAJC3,FC=0.73,p=0.024329081 DNAJC3,FC=-0.27,p=0.60348374 RAP2A,FC=-0.20,p=0.474887566 RAP2A,FC=-0.55,p=0.120150721 RAP2A,FC=-0.61,p=0.041681181 FARP1,FC=-0.28,p=0.290686198 FARP1,FC=-0.45,p=0.192150442 STK24,FC=0.34,p=0.335658662 STK24,FC=0.11,p=0.667187877 STK24,FC=0.20,p=0.504336459 TM9SF2,FC=-0.27,p=0.265242718 ZIC2,FC=1.11,p=0.010883453 ZIC2,FC=0.71,p=0.12255058 PCCA,FC=0.53,p=0.131586404

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      GPC5,FC=0.17,p=0.826723474 ABCC4,FC=-0.36,p=0.152148647 CLDN10,FC=0.09,p=0.808573143 CLDN10,FC=1.00,p=0.012849371 DNAJC3,FC=-0.39,p=0.255159995 DNAJC3,FC=0.51,p=0.042238475 DNAJC3,FC=-0.42,p=0.174753914 RAP2A,FC=0.27,p=0.312848298 RAP2A,FC=-0.41,p=0.160019007 RAP2A,FC=-0.53,p=0.062003542 FARP1,FC=-0.67,p=0.039629266 FARP1,FC=-0.83,p=0.017076437 STK24,FC=0.44,p=0.143998304 STK24,FC=0.34,p=0.301052682 STK24,FC=0.43,p=0.171199653 TM9SF2,FC=-0.54,p=0.065918109 ZIC2,FC=2.10,p=0.000182459 ZIC2,FC=1.41,p=0.008719663 PCCA,FC=0.41,p=0.392372959


        Agilent_HS_21.6K (GSE11969)
        Adenocarcinoma      Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLITRK1,FC=0.02,p=0.56822265 SLITRK6,FC=0.19,p=0.39797946 SLITRK5,FC=0.17,p=0.019369049 GPC5,FC=0.02,p=0.574734581 GPC5,FC=0.04,p=0.449827436 GPC6,FC=-0.08,p=0.146915152 TGDS,FC=0.21,p=9.31e-05 SOX21,FC=-0.02,p=0.530593585 ABCC4,FC=0.05,p=0.149695596 DZIP1,FC=-0.04,p=0.25583589 HS6ST3,FC=0.20,p=0.044549063 HS6ST3,FC=0.05,p=0.404867204 OXGR1,FC=0.01,p=0.78497322 RAP2A,FC=0.17,p=0.074874813 STK24,FC=-0.07,p=0.407565957 SLC15A1,FC=0.09,p=0.034448831 DOCK9,FC=-0.03,p=0.642320172 GPR18,FC=-0.18,p=0.039676314 TM9SF2,FC=0.06,p=0.447836118 CLYBL,FC=-0.28,p=0.00053347 ZIC5,FC=0.05,p=0.172288281 ZIC2,FC=0.31,p=0.038501355 PCCA,FC=0.06,p=0.603837832

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      SLITRK1,FC=0.05,p=0.543997515 SLITRK6,FC=0.10,p=0.537010261 SLITRK5,FC=0.12,p=0.03057115 GPC5,FC=0.02,p=0.412347859 GPC5,FC=0.02,p=0.736831357 GPC6,FC=-0.11,p=0.041288335 TGDS,FC=0.17,p=0.001212659 SOX21,FC=0.02,p=0.702015593 ABCC4,FC=0.04,p=0.222608935 DZIP1,FC=0.01,p=0.886510082 HS6ST3,FC=0.19,p=0.10847096 HS6ST3,FC=0.10,p=0.311149143 OXGR1,FC=0.02,p=0.550552185 RAP2A,FC=0.24,p=0.114031687 STK24,FC=0.12,p=0.145142636 SLC15A1,FC=0.12,p=0.016334431 DOCK9,FC=-0.10,p=0.021645009 GPR18,FC=-0.19,p=0.087666472 TM9SF2,FC=0.06,p=0.487515496 CLYBL,FC=-0.25,p=0.007966201 ZIC5,FC=0.06,p=0.050781355 ZIC2,FC=0.44,p=0.001226207 PCCA,FC=-0.10,p=0.097898889


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    Copy Number Alteration Data        (help)
            ( red: amplification / green : deletion)

         Adenocarcinoma          Squamous Cell Carcinoma
        Meyerson Adenocarcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE17958 Squamous Cell Carcinoma (SNP)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

        GSE12280_SGOL (SCC / aCGH)      Save as a PNG file. Save as a PDF file. Save as a PS file.
      

      

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    miRNA Expression Data        (help)
            ( red: up-regulation / green : down-regulation)

         Adenocarcinoma          Squamous Cell Carcinoma
        GSE15201
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-miR-622,Mean=0.69 hsa-miR-17,Mean=-0.13 hsa-miR-17,Mean=-3.33 hsa-miR-18a,Mean=-1.03 hsa-miR-18a,Mean=-0.36 hsa-miR-19a,Mean=-3.29 hsa-miR-20a,Mean=-4.10 hsa-miR-623,Mean=-0.15

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-miR-622,Mean=0.61 hsa-miR-17,Mean=-0.33 hsa-miR-17,Mean=-3.98 hsa-miR-18a,Mean=-1.07 hsa-miR-18a,Mean=-0.18 hsa-miR-19a,Mean=-3.31 hsa-miR-20a,Mean=-4.65 hsa-miR-623,Mean=-0.03

        GSE18692
        Adenocarcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-mir-622,Mean=0.02 hsa-mir-17,Mean=0.12 hsa-mir-18a,Mean=0.16 hsa-mir-19a,Mean=0.17 hsa-mir-20a,Mean=0.15 hsa-mir-19b-1,Mean=0.10 hsa-mir-92a-1,Mean=0.14

        Squamous Cell Carcinoma       Save as a PNG file. Save as a PDF file. Save as a PS file.
      array picturehsa-mir-622,Mean=0.03 hsa-mir-17,Mean=0.29 hsa-mir-18a,Mean=0.56 hsa-mir-19a,Mean=0.38 hsa-mir-20a,Mean=0.35 hsa-mir-19b-1,Mean=0.32 hsa-mir-92a-1,Mean=0.25

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    Paired (U133A/aCGH) AD Sample Data        (help) (PubMed)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

SLITRK5,FC=0.14,p=0.400134345 GPC5,FC=-1.02,p=8.59e-07 DCT,FC=-0.19,p=0.244958104 DCT,FC=0.36,p=0.000813777 DCT,FC=-0.60,p=1.37e-17 TGDS,FC=0.12,p=0.021245452 SOX21,FC=-1.39,p=1.57e-14 ABCC4,FC=0.10,p=0.415167878 CLDN10,FC=0.71,p=0.000955306 DZIP1,FC=-0.49,p=9.11e-12 DZIP1,FC=-0.84,p=5.13e-05 DNAJC3,FC=1.67,p=2.2e-40 UGGT2,FC=0.38,p=1.04e-07 MBNL2,FC=-0.32,p=3.66e-05 MBNL2,FC=1.12,p=1.31e-12 MBNL2,FC=0.92,p=2.35e-09 RAP2A,FC=-0.25,p=0.005836243 IPO5,FC=0.16,p=0.027287687 IPO5,FC=-0.05,p=0.41762999 IPO5,FC=-0.37,p=7.42e-06 IPO5,FC=0.05,p=0.480444752 FARP1,FC=-0.13,p=0.053932835 FARP1,FC=-0.77,p=9.88e-24 STK24,FC=0.87,p=6.97e-07 STK24,FC=-0.04,p=0.394132137 STK24,FC=0.24,p=0.000238883 SLC15A1,FC=-0.55,p=6.16e-10 SLC15A1,FC=0.40,p=0.055656614 DOCK9,FC=-0.32,p=0.010696814 DOCK9,FC=0.37,p=0.008272297 DOCK9,FC=-0.43,p=0.007611767 DOCK9,FC=-0.36,p=0.022736869 DOCK9,FC=-1.13,p=1.02e-20 GPR18,FC=0.24,p=0.076706602 GPR183,FC=-0.05,p=0.723031545 TM9SF2,FC=0.56,p=1.03e-15 PCCA,FC=0.93,p=3.48e-06 PCCA,FC=0.55,p=6.01e-07

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    Array CGH Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

RP11-421K11, 3/50, 0.06 RP11-421K11, 12/50, 0.24 RP11-533P8, 4/50, 0.08 RP11-533P8, 9/50, 0.18 RP11-115N13, 5/50, 0.1 RP11-115N13, 21/50, 0.42 RP11-464I4, 2/50, 0.04 RP11-464I4, 11/50, 0.22 RP11-120L14, 5/50, 0.1 RP11-120L14, 14/50, 0.28 RP11-376H15, 0/50, 0 RP11-376H15, 5/50, 0.1 RP11-366K1, 3/50, 0.06 RP11-366K1, 10/50, 0.2 RP11-365J7, 1/50, 0.02 RP11-365J7, 7/50, 0.14 RP11-478H12, 1/50, 0.02 RP11-478H12, 17/50, 0.34 RP11-275J18, 0/50, 0 RP11-275J18, 9/50, 0.18 RP11-388D4, 1/50, 0.02 RP11-388D4, 11/50, 0.22 RP11-319L6, 1/50, 0.02 RP11-319L6, 11/50, 0.22 RP11-95C14, 5/50, 0.1 RP11-95C14, 11/50, 0.22 RP11-632L2, 0/50, 0 RP11-632L2, 13/50, 0.26 RP11-62D23, 1/50, 0.02 RP11-62D23, 16/50, 0.32 RP11-74A12, 2/50, 0.04 RP11-74A12, 6/50, 0.12 RP11-318K19, 4/50, 0.08 RP11-318K19, 6/50, 0.12 RP11-235O20, 3/50, 0.06 RP11-235O20, 16/50, 0.32 RP11-383H17, 4/50, 0.08 RP11-383H17, 4/50, 0.08 RP11-442I9, 4/50, 0.08 RP11-442I9, 5/50, 0.1 RP11-279D17, 0/50, 0 RP11-279D17, 3/50, 0.06 RP11-118F16, 2/50, 0.04 RP11-118F16, 14/50, 0.28

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    CGH Minimal Deletion Region Data        (help)      Save as a PNG file. Save as a PDF file. Save as a PS file.
            ( red: amplification / green : deletion)

PMID=11748636 PMID=12367789 PMID=14581340 PMID=15983384

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    LOH Frequency Data        (help)       Save as a PNG file. Save as a PDF file. Save as a PS file.

D13S265, 6/12, 50% PMID=10987304 D13S159, 11/20, 55% D13S317, 8/15, 53% PMID=15900585 D13S317, 5/15, 33%

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