IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene CHAF1B Ensembl ENSG00000159259 Chromosome 21 Start 36679559 End 36710994
Description Chromatin assembly factor 1 subunit B (CAF-1 subunit B)(Chromatin assembly factor I p60 subunit)(CAF-I 60 kDa subunit)(CAF-Ip60)(M-phase phosphoprotein 7) [Source:UniProtKB/Swiss-Prot;Acc:Q13112]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 1911
     Entrez Gene : 8208
     UCSC : uc002yvj.2
     GeneCards : 1911
     RefSeq : NM_005441
     CCDS : CCDS13644.1
     Uniprot : Q13112
     Interpro : Q13112
     OMIM : 601245
     GeneTests : CHAF1B
     CGAP : CHAF1B
     PMID : 7600578

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  36912_at  0.55  1.73e-3  5.10e-3  1.07  1.77e-5  8.42e-5
 HG_U133A  204775_at  2.26  3.19e-28  4.40e-27  4.84  2.22e-91  1.20e-90
 HG_U133_Plus2  204775_at  0.75  4.24e-5  1.45e-4  1.06  4.43e-6  1.19e-5
 Stanford  10599  1.72  2.05e-6  2.31e-4  1.85  2.36e-6  1.76e-4
 Agilent_HS_21.6K  5319  0.26  5.34e-4  4.59e-3  0.32  7.55e-6  8.91e-5

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  204775_at  0.01  9.83e-1  9.99e-1  0.45  2.26e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 36912_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204775_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204775_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 10599    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 5319    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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Cancer Gene Index        (help)

If 0 entry was found, please remove the search key "lung cancer".
Keyword DiseaseData Statement PubMed Organism
caf-1 breast tumors Biological material from benign and malignant human breast tumors analyzed by immunocytochemistry and immunohistochemistry exhibits a strong positive correlation between CAF-1 p60 expression and the following proliferation markers: S-phase fraction (r = 0 15059888 Human

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