IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene TARS Ensembl ENSG00000113407 Chromosome 5 Start 33476655 End 33503953
Description Threonyl-tRNA synthetase, cytoplasmic (EC 6.1.1.3)(Threonine--tRNA ligase)(ThrRS) [Source:UniProtKB/Swiss-Prot;Acc:P26639]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :
     HGNC : 11572
     Entrez Gene : 6897
     UCSC : uc003jhy.2
     GeneCards : 11572
     RefSeq : NM_152295
     CCDS : CCDS3899.1
     Uniprot : P26639
     Interpro : P26639
     OMIM : 187790
     GeneTests : TARS
     CGAP : TARS

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  38473_at  0.43  4.96e-4  1.70e-3  1.04  3.12e-9  3.14e-8
 HG_U133A  201263_at  0.68  3.19e-15  1.74e-14  0.93  1.06e-28  1.74e-28
 HG_U133_Plus2  201263_at  0.32  3.45e-4  9.88e-4  0.52  1.30e-6  3.75e-6
 HG_U133_Plus2  240206_at  0.66  2.71e-7  1.34e-6  1.13  1.57e-15  1.31e-14
 Stanford  328  0.72  2.07e-2  1.03e-1  0.96  5.22e-3  4.40e-2
 Agilent_HS_21.6K  6664  0.22  2.13e-2  7.97e-2  0.50  2.38e-8  6.34e-7

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  201263_at  -0.17  6.63e-1  9.63e-1  -0.04  8.91e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 38473_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201263_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201263_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 240206_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 328    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 6664    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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