IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SLITRK5 Ensembl ENSG00000165300 Chromosome 13 Start 87122871 End 87129869
Description SLIT and NTRK-like protein 5 Precursor (Leucine-rich repeat-containing protein 11) [Source:UniProtKB/Swiss-Prot;Acc:O94991]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 20295
     Entrez Gene : 26050
     UCSC : uc001vln.2
     GeneCards : 20295
     RefSeq : NM_015567
     CCDS : CCDS9465.1
     Uniprot : O94991
     Interpro : O94991
     OMIM : 609680
     GeneTests : SLITRK5
     CGAP : SLITRK5
     PMID : 10048485

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  33576_at  -0.19  4.03e-1  5.10e-1  -0.19  5.18e-1  6.18e-1
 HG_U133A  214930_at  0.23  1.42e-1  1.80e-1  0.79  7.96e-21  1.17e-20
 HG_U133_Plus2  214930_at  -0.40  9.50e-2  1.47e-1  -0.54  2.65e-2  4.00e-2
 Agilent_HS_21.6K  4417  0.17  1.94e-2  7.46e-2  0.12  3.06e-2  8.53e-2

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  214930_at  -0.17  6.49e-1  9.60e-1  -0.17  5.49e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 33576_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 214930_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 214930_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 4417    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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