IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene GPC5 Ensembl ENSG00000179399 Chromosome 13 Start 90848919 End 92316693
Description Glypican-5 Precursor [Contains Secreted glypican-5] [Source:UniProtKB/Swiss-Prot;Acc:P78333]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 4453
     Entrez Gene : 2262
     UCSC : uc010tif.1
     GeneCards : 4453
     RefSeq : NM_004466
     CCDS : CCDS9468.1
     Uniprot : P78333
     Interpro : P78333
     OMIM : 602446
     GeneTests : GPC5
     CGAP : GPC5
     PMID : 9070915

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  36788_at  0.03  9.20e-1  9.41e-1  0.01  9.75e-1  9.84e-1
 HG_U133A  207174_at  -0.93  2.28e-8  6.95e-8  1.97  2.96e-35  5.34e-35
 HG_U133_Plus2  207174_at  -1.89  4.96e-15  6.74e-14  -2.51  1.78e-21  2.91e-20
 HG_U133_Plus2  233372_at  -0.11  5.53e-1  6.37e-1  -0.21  3.34e-1  3.95e-1
 HG_U133_Plus2  240563_at  0.38  8.90e-2  1.39e-1  0.57  2.27e-2  3.47e-2
 Stanford  14142  -0.01  9.86e-1  9.93e-1  0.17  8.27e-1  9.20e-1
 Agilent_HS_21.6K  1899  0.02  5.75e-1  7.33e-1  0.02  4.12e-1  5.72e-1
 Agilent_HS_21.6K  19455  0.04  4.50e-1  6.31e-1  0.02  7.37e-1  8.31e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  207174_at  0.44  4.66e-1  9.21e-1  0.34  3.69e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 36788_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 207174_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 207174_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 233372_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 240563_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 14142    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 1899    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 19455    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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