IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene GPC6 Ensembl ENSG00000183098 Chromosome 13 Start 92677711 End 93853948
Description Glypican-6 Precursor [Contains Secreted glypican-6] [Source:UniProtKB/Swiss-Prot;Acc:Q9Y625]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 4454
     Entrez Gene : 10082
     UCSC : uc001vlt.2
     GeneCards : 4454
     RefSeq : NM_005708
     CCDS : CCDS9469.1
     Uniprot : Q9Y625
     Interpro : Q9Y625
     OMIM : 604404
     GeneTests : GPC6
     CGAP : GPC6
     PMID : 10329016

< Top >


Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133_Plus2  223730_at  -0.01  9.71e-1  9.80e-1  -0.31  1.43e-1  1.85e-1
 HG_U133_Plus2  227059_at  -0.18  3.43e-1  4.32e-1  -0.81  2.80e-4  5.87e-4
 HG_U133_Plus2  232453_at  1.23  3.76e-5  1.30e-4  0.42  1.43e-1  1.85e-1
 HG_U133_Plus2  233090_at  0.98  2.30e-6  9.79e-6  0.42  8.07e-2  1.11e-1
 HG_U133_Plus2  233222_at  0.48  1.65e-2  3.18e-2  0.58  6.79e-3  1.14e-2
 HG_U133_Plus2  233667_at  0.71  9.03e-4  2.37e-3  0.18  4.05e-1  4.67e-1
 HG_U133_Plus2  233670_at  0.36  7.55e-2  1.20e-1  -0.26  2.57e-1  3.13e-1
 Agilent_HS_21.6K  7607  -0.08  1.47e-1  3.05e-1  -0.11  4.13e-2  1.07e-1

< Top >


Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133_Plus2 - 223730_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 227059_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 232453_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 233090_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 233222_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 233667_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 233670_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 7607    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

< Top >


Download all image files.
Save all PNG files.    Save all PDF files.    Save all PS files.