IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene TGDS Ensembl ENSG00000088451 Chromosome 13 Start 94024336 End 94046512
Description dTDP-D-glucose 4,6-dehydratase (EC 4.2.1.46) [Source:UniProtKB/Swiss-Prot;Acc:O95455]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 20324
     Entrez Gene : 23483
     UCSC : uc001vlw.2
     GeneCards : 20324
     RefSeq : NM_014305
     CCDS : CCDS9471.1
     Uniprot : O95455
     Interpro : O95455
     GeneTests : TGDS
     CGAP : TGDS
     PMID : 19027726

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  41667_s_at  0.47  3.29e-9  3.69e-8  0.33  7.01e-3  1.69e-2
 HG_U95  41668_r_at  0.25  4.12e-1  5.19e-1  -0.04  9.26e-1  9.49e-1
 HG_U133A  208249_s_at  0.16  7.72e-4  1.43e-3  -1.19  3.48e-43  7.08e-43
 HG_U133_Plus2  208249_s_at  0.25  2.24e-3  5.37e-3  -0.00  9.76e-1  9.81e-1
 HG_U133_Plus2  237346_at  0.44  3.20e-3  7.41e-3  0.34  2.07e-2  3.18e-2
 Agilent_HS_21.6K  5543  0.21  9.31e-5  1.14e-3  0.17  1.21e-3  6.35e-3

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  208249_s_at  0.07  6.81e-1  9.66e-1  -0.00  9.68e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 41667_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U95 - 41668_r_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 208249_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 208249_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 237346_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 5543    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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