IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SOX21 Ensembl ENSG00000125285 Chromosome 13 Start 94160749 End 94162511
Description Transcription factor SOX-21 (SOX-A) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y651]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 11197
     Entrez Gene : 11166
     UCSC : uc001vma.2
     GeneCards : 11197
     RefSeq : NM_007084
     CCDS : CCDS9473.1
     Uniprot : Q9Y651
     Interpro : Q9Y651
     OMIM : 604974
     GeneTests : SOX21
     CGAP : SOX21
     PMID : 10441749

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  35877_at  0.70  6.82e-4  2.24e-3  1.46  1.53e-6  9.18e-6
 HG_U133A  208468_at  -0.37  2.95e-4  5.76e-4  -1.08  1.55e-18  2.20e-18
 HG_U133_Plus2  208468_at  -0.20  2.60e-1  3.45e-1  0.40  5.04e-2  7.21e-2
 Agilent_HS_21.6K  15030  -0.02  5.31e-1  6.99e-1  0.02  7.02e-1  8.05e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  208468_at  -0.24  5.82e-1  9.49e-1  -0.12  6.44e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 35877_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 208468_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 208468_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 15030    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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