IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene FARP1 Ensembl ENSG00000152767 Chromosome 13 Start 97593435 End 97900017
Description FERM, RhoGEF and pleckstrin domain-containing protein 1 (Chondrocyte-derived ezrin-like protein) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y4F1]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 3591
     Entrez Gene : 10160
     UCSC : uc001vnj.2
     GeneCards : 3591
     RefSeq : NM_001001715
     CCDS : CCDS9487.1
     Uniprot : Q9Y4F1
     Interpro : Q9Y4F1
     OMIM : 602654
     GeneTests : FARP1
     CGAP : FARP1
     PMID : 9425278

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  32147_at  0.28  2.09e-1  3.04e-1  0.55  5.24e-2  9.52e-2
 HG_U95  32148_at  -0.61  3.77e-9  4.19e-8  -0.66  3.36e-7  2.32e-6
 HG_U133A  201910_at  -0.79  9.29e-21  7.72e-20  -2.38  2.45e-69  7.86e-69
 HG_U133A  201911_s_at  -0.12  1.11e-1  1.45e-1  -1.89  3.50e-80  1.43e-79
 HG_U133_Plus2  1562425_at  0.04  7.47e-1  8.04e-1  -0.11  3.28e-1  3.88e-1
 HG_U133_Plus2  1562426_a_at  0.17  3.15e-1  4.03e-1  0.19  3.28e-1  3.88e-1
 HG_U133_Plus2  201910_at  -0.33  1.89e-5  6.87e-5  -0.20  3.44e-2  5.08e-2
 HG_U133_Plus2  201911_s_at  -0.36  5.36e-5  1.79e-4  -0.25  1.66e-2  2.60e-2
 HG_U133_Plus2  227996_at  1.18  2.16e-16  3.42e-15  0.89  5.42e-9  2.11e-8
 HG_U133_Plus2  232928_at  -0.53  5.21e-4  1.44e-3  -0.64  6.07e-5  1.40e-4
 HG_U133_Plus2  233552_at  0.60  4.63e-3  1.03e-2  -0.24  2.14e-1  2.66e-1
 HG_U133_Plus2  239246_at  0.60  2.09e-5  7.54e-5  0.12  3.94e-1  4.56e-1
 Stanford  2612  -0.45  1.92e-1  3.80e-1  -0.83  1.71e-2  9.99e-2
 Stanford  4187  -0.28  2.91e-1  4.93e-1  -0.67  3.96e-2  1.45e-1
 Agilent_HS_21.6K  11915  -0.11  3.52e-6  7.23e-5  -0.12  2.49e-6  3.40e-5
 Agilent_HS_21.6K  17922  0.02  8.85e-1  9.37e-1  -0.11  4.59e-1  6.13e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  201910_at  0.29  3.30e-1  8.86e-1  0.13  6.61e-1  1.00e+0
 HG_U133A  201911_s_at  0.41  2.63e-1  8.61e-1  0.08  6.66e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 32147_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U95 - 32148_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201910_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201911_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1562425_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1562426_a_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201910_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201911_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 227996_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 232928_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 233552_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 239246_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 2612    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 4187    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 11915    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 17922    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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