IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene TM9SF2 Ensembl ENSG00000125304 Chromosome 13 Start 98951672 End 99013635
Description Transmembrane 9 superfamily member 2 Precursor (p76) [Source:UniProtKB/Swiss-Prot;Acc:Q99805]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 11865
     Entrez Gene : 9375
     UCSC : uc001voj.1
     GeneCards : 11865
     RefSeq : NM_004800
     CCDS : CCDS9493.1
     Uniprot : Q99805
     Interpro : Q99805
     OMIM : 604678
     GeneTests : TM9SF2
     CGAP : TM9SF2
     PMID : 9729438

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  34307_at  -0.19  2.88e-2  5.78e-2  -0.40  8.65e-4  2.74e-3
 HG_U133A  201078_at  0.50  1.35e-12  6.00e-12  -1.75  9.12e-53  2.17e-52
 HG_U133_Plus2  201078_at  0.31  5.72e-5  1.90e-4  0.11  1.83e-1  2.31e-1
 Stanford  12114  -0.27  2.65e-1  4.65e-1  -0.54  6.59e-2  2.06e-1
 Agilent_HS_21.6K  4771  0.06  4.48e-1  6.30e-1  0.06  4.88e-1  6.38e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  201078_at  0.31  2.02e-1  8.30e-1  -0.29  1.45e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 34307_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201078_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201078_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 12114    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 4771    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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