IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene CCDC49 Ensembl ENSG00000108296 Chromosome 17 Start 34210973 End 34242007
Description Coiled-coil domain-containing protein 49 [Source:UniProtKB/Swiss-Prot;Acc:Q9NXE8]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 25989
     Entrez Gene : 54883
     UCSC : uc002hqu.2
     GeneCards : 25989
     RefSeq : NM_017748
     CCDS : CCDS45663.1
     Uniprot : Q9NXE8
     Interpro : Q9NXE8
     GeneTests : CWC25
     CGAP : CWC25
     PMID : 19941820

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  218655_s_at  -0.39  1.36e-21  1.19e-20  0.05  2.48e-1  2.57e-1
 HG_U133_Plus2  218655_s_at  0.02  7.30e-1  7.91e-1  0.32  3.48e-5  8.28e-5
 HG_U133_Plus2  222706_at  -0.38  2.68e-5  9.50e-5  -0.36  4.98e-4  1.01e-3

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  218655_s_at  0.08  5.65e-1  9.43e-1  -0.01  9.35e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133A - 218655_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 218655_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 222706_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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