IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene RAB5C Ensembl ENSG00000108774 Chromosome 17 Start 37530524 End 37560548
Description Ras-related protein Rab-5C (RAB5L)(L1880) [Source:UniProtKB/Swiss-Prot;Acc:P51148]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 9785
     Entrez Gene : 5878
     UCSC : uc002hza.2
     GeneCards : 9785
     RefSeq : NM_004583
     CCDS : CCDS11419.1
     Uniprot : P51148
     Interpro : P51148
     OMIM : 604037
     GeneTests : RAB5C
     CGAP : RAB5C
     PMID : 8646882

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  34836_at  0.08  3.27e-1  4.33e-1  -0.01  9.15e-1  9.43e-1
 HG_U133A  201140_s_at  0.14  6.41e-2  8.73e-2  2.88  5.85e-95  3.45e-94
 HG_U133A  201156_s_at  0.21  1.47e-4  2.98e-4  0.54  1.82e-11  2.33e-11
 HG_U133_Plus2  201140_s_at  -0.08  4.67e-1  5.56e-1  0.03  8.43e-1  8.70e-1
 HG_U133_Plus2  201156_s_at  0.24  2.68e-2  4.88e-2  0.12  2.61e-1  3.17e-1
 Stanford  12638  0.16  6.47e-1  7.90e-1  0.21  4.61e-1  6.84e-1
 Agilent_HS_21.6K  19902  -0.00  9.25e-1  9.58e-1  0.01  8.40e-1  9.02e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  201140_s_at  -0.06  8.47e-1  9.88e-1  0.07  6.60e-1  1.00e+0
 HG_U133A  201156_s_at  -0.02  9.29e-1  9.95e-1  -0.03  8.00e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 34836_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201140_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201156_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201140_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201156_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 12638    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 19902    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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