IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene GJC1 Ensembl ENSG00000182963 Chromosome 17 Start 40231342 End 40263133
Description Gap junction gamma-1 protein (Gap junction alpha-7 protein)(Connexin-45)(Cx45) [Source:UniProtKB/Swiss-Prot;Acc:P36383]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 4280
     Entrez Gene : 10052
     UCSC : uc002ihl.2
     GeneCards : 4280
     RefSeq : NM_001080383
     CCDS : CCDS11487.1
     Uniprot : P36383
     Interpro : P36383
     OMIM : 608655
     GeneTests : GJC1
     CGAP : GJC1
     PMID : 7966354

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  33041_at  -0.29  9.61e-2  1.60e-1  -0.21  3.69e-1  4.75e-1
 HG_U133A  208460_at  -0.49  6.20e-6  1.47e-5  -2.75  3.01e-57  7.75e-57
 HG_U133_Plus2  208460_at  0.09  6.08e-1  6.86e-1  0.90  7.43e-5  1.69e-4
 HG_U133_Plus2  228563_at  0.09  6.80e-1  7.48e-1  0.61  8.94e-3  1.47e-2
 HG_U133_Plus2  228776_at  -1.05  4.08e-17  7.04e-16  -0.68  4.67e-6  1.25e-5
 HG_U133_Plus2  243502_at  -0.59  3.10e-3  7.20e-3  -0.35  1.41e-1  1.83e-1
 Agilent_HS_21.6K  1721  0.05  1.70e-1  3.35e-1  0.08  3.16e-2  8.75e-2
 Agilent_HS_21.6K  13188  -0.18  1.52e-2  6.24e-2  -0.19  4.33e-2  1.11e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  208460_at  0.30  3.36e-1  8.87e-1  -0.02  9.24e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 33041_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 208460_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 208460_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 228563_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 228776_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 243502_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 1721    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 13188    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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