IGDB.NSCLC Gene View
Gene Information Microarray Gene Expression Result Treatment Result Microarray Sample Data
 
Gene Information        (help)
Gene CBX1 Ensembl ENSG00000108468 Chromosome 17 Start 43502414 End 43533806
Description Chromobox protein homolog 1 (Heterochromatin protein 1 homolog beta)(HP1 beta)(Modifier 1 protein)(M31)(Heterochromatin protein p25)(HP1Hsbeta)(p25beta) [Source:UniProtKB/Swiss-Prot;Acc:P83916]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 1551
     Entrez Gene : 10951
     UCSC : uc002ind.3
     GeneCards : 1551
     RefSeq : NM_001127228
     CCDS : CCDS11525.1
     Uniprot : P83916
     Interpro : P83916
     OMIM : 604511
     GeneTests : CBX1
     CGAP : CBX1
     PMID : 9169582

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  37304_at  0.32  1.05e-2  2.44e-2  1.01  1.76e-7  1.28e-6
 HG_U133A  201518_at  0.58  3.91e-22  3.57e-21  1.24  3.88e-61  1.07e-60
 HG_U133_Plus2  201518_at  0.45  2.19e-9  1.45e-8  0.81  8.82e-15  6.76e-14
 Stanford  16690  1.15  1.80e-4  4.82e-3  1.60  2.96e-7  4.13e-5
 Agilent_HS_21.6K  3682  0.22  5.40e-4  4.63e-3  0.25  8.84e-5  7.16e-4

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  201518_at  -0.17  4.82e-1  9.26e-1  0.25  1.63e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 37304_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201518_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201518_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 16690    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 3682    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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