IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene CALCOCO2 Ensembl ENSG00000136436 Chromosome 17 Start 44263371 End 44297227
Description Calcium-binding and coiled-coil domain-containing protein 2 (Nuclear domain 10 protein NDP52)(Nuclear domain 10 protein 52)(Nuclear dot protein 52)(Antigen nuclear dot 52 kDa protein) [Source:UniProtKB/Swiss-Prot;Acc:Q13137]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 29912
     Entrez Gene : 10241
     UCSC : uc002iof.2
     GeneCards : 29912
     RefSeq : NM_005831
     CCDS : CCDS11538.1
     Uniprot : Q13137
     Interpro : Q13137
     OMIM : 604587
     GeneTests : CALCOCO2
     CGAP : CALCOCO2
     PMID : 7540613

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  40063_at  -0.70  2.77e-13  6.59e-12  -1.06  1.48e-13  3.49e-12
 HG_U133A  210817_s_at  -0.35  1.27e-12  5.69e-12  -2.41  1.16e-104  8.96e-104
 HG_U133_Plus2  1560631_at  0.69  4.27e-6  1.74e-5  1.24  1.56e-11  8.23e-11
 HG_U133_Plus2  210817_s_at  -0.42  3.43e-12  3.30e-11  -0.53  4.24e-13  2.68e-12
 HG_U133_Plus2  235076_at  -0.63  2.64e-7  1.31e-6  -1.37  1.49e-13  9.88e-13
 HG_U133_Plus2  238560_at  -0.27  9.23e-3  1.91e-2  -0.25  5.27e-3  9.01e-3

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  210817_s_at  -0.17  3.24e-1  8.82e-1  -0.04  7.68e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 40063_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 210817_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1560631_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 210817_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 235076_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 238560_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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Cancer Gene Index        (help)

If 0 entry was found, please remove the search key "lung cancer".
Keyword DiseaseData Statement PubMed Organism
ndp52 tumor Northern blot analysis showed that the BC8 clone bovine NDP52 was predominantly expressed in tumor cell line BTL-26, compared with the transcripts from several bovine tissues. 9643455 others

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