IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SPOP Ensembl ENSG00000121067 Chromosome 17 Start 45031247 End 45110524
Description Speckle-type POZ protein (HIB homolog 1)(Roadkill homolog 1) [Source:UniProtKB/Swiss-Prot;Acc:O43791]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 11254
     Entrez Gene : 8405
     UCSC : uc002ipg.2
     GeneCards : 11254
     RefSeq : NM_001007226
     CCDS : CCDS11551.1
     Uniprot : O43791
     Interpro : O43791
     OMIM : 602650
     GeneTests : SPOP
     CGAP : SPOP
     PMID : 9414087

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  39423_f_at  0.52  3.76e-3  1.00e-2  0.60  2.60e-2  5.27e-2
 HG_U133A  204640_s_at  -0.52  1.03e-24  1.12e-23  -6.84  3.30e-186  5.79e-184
 HG_U133A  208927_at  -0.38  8.82e-9  2.80e-8  -5.32  1.55e-126  2.25e-125
 HG_U133_Plus2  204640_s_at  0.03  6.28e-1  7.03e-1  -0.04  4.77e-1  5.37e-1
 HG_U133_Plus2  208927_at  -0.22  3.00e-3  6.98e-3  -0.27  2.76e-3  4.95e-3
 HG_U133_Plus2  238923_at  -0.18  4.06e-2  7.02e-2  -0.51  5.11e-8  1.76e-7
 Stanford  11861  0.09  7.38e-1  8.51e-1  -0.18  5.08e-1  7.22e-1
 Stanford  23450  0.25  4.14e-1  6.09e-1  -0.02  9.42e-1  9.75e-1
 Agilent_HS_21.6K  6662  -0.19  2.71e-8  1.06e-6  -0.23  7.56e-13  8.93e-11

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  204640_s_at  0.02  8.78e-1  9.92e-1  0.15  1.71e-1  1.00e+0
 HG_U133A  208927_at  0.03  8.85e-1  9.92e-1  0.15  2.71e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 39423_f_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204640_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 208927_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204640_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 208927_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 238923_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 11861    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 23450    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 6662    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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