IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene KCNN4 Ensembl ENSG00000104783 Chromosome 19 Start 48962525 End 48977249
Description Intermediate conductance calcium-activated potassium channel protein 4 (SK4)(KCa4)(IKCa1)(IK1)(Putative Gardos channel) [Source:UniProtKB/Swiss-Prot;Acc:O15554]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 6293
     Entrez Gene : 3783
     UCSC : uc002oxl.2
     GeneCards : 6293
     RefSeq : NM_002250
     CCDS : CCDS12630.1
     Uniprot : O15554
     Interpro : O15554
     OMIM : 602754
     GeneTests : KCNN4
     CGAP : KCNN4
     PMID : 9380751

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  41106_at  2.00  7.48e-14  1.96e-12  0.84  1.53e-3  4.49e-3
 HG_U133A  204401_at  1.76  8.33e-31  1.36e-29  -3.24  4.67e-86  2.20e-85
 HG_U133_Plus2  204401_at  1.55  6.07e-13  6.41e-12  0.51  1.01e-2  1.64e-2
 Stanford  8867  2.58  9.31e-6  6.89e-4  0.48  2.72e-1  5.11e-1
 Agilent_HS_21.6K  13965  0.30  2.11e-3  1.39e-2  0.08  2.66e-1  4.20e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  204401_at  -0.92  2.41e-2  6.89e-1  -0.22  4.69e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 41106_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204401_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204401_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 8867    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 13965    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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