IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene CLPTM1 Ensembl ENSG00000104853 Chromosome 19 Start 50150477 End 50188438
Description Cleft lip and palate transmembrane protein 1 [Source:UniProtKB/Swiss-Prot;Acc:O96005]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 2087
     Entrez Gene : 1209
     UCSC : uc002pai.2
     GeneCards : 2087
     RefSeq : NM_001294
     CCDS : CCDS12651.1
     Uniprot : O96005
     Interpro : O96005
     OMIM : 604783
     GeneTests : CLPTM1
     CGAP : CLPTM1
     PMID : 9828125

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  41413_at  0.19  7.20e-3  1.76e-2  -0.01  9.32e-1  9.54e-1
 HG_U133A  201640_x_at  0.19  1.52e-3  2.69e-3  0.52  3.51e-15  4.75e-15
 HG_U133A  211136_s_at  0.56  9.26e-13  4.18e-12  -4.93  7.34e-99  4.81e-98
 HG_U133_Plus2  201640_x_at  0.61  1.99e-10  1.52e-9  0.99  2.54e-13  1.65e-12
 HG_U133_Plus2  211136_s_at  0.63  2.53e-6  1.07e-5  0.99  1.15e-11  6.15e-11
 Stanford  5632  0.50  6.46e-2  1.85e-1  0.38  1.66e-1  3.78e-1
 Stanford  8556  0.75  2.62e-2  1.20e-1  0.83  6.52e-3  5.14e-2
 Agilent_HS_21.6K  17986  0.03  2.91e-1  4.78e-1  0.05  2.67e-1  4.22e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  201640_x_at  0.14  6.57e-1  9.61e-1  0.14  3.61e-1  1.00e+0
 HG_U133A  211136_s_at  0.29  4.27e-1  9.11e-1  -0.11  4.08e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 41413_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201640_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 211136_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201640_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 211136_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 5632    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 8556    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 17986    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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Cancer Gene Index        (help)

If 0 entry was found, please remove the search key "lung cancer".
Keyword DiseaseData Statement PubMed Organism
clptm1 prostate cancer Identification of inactivating mutations in the JAK1, SYNJ2, and CLPTM1 genes in prostate cancer cells using inhibition of nonsense-mediated decay and microarray analysis. 16102578 Human

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