IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene TRAPPC6A Ensembl ENSG00000007255 Chromosome 19 Start 50358027 End 50373325
Description Trafficking protein particle complex subunit 6A (TRAPP complex subunit 6A) [Source:UniProtKB/Swiss-Prot;Acc:O75865]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :
     HGNC : 23069
     Entrez Gene : 79090
     UCSC : uc002pav.2
     GeneCards : 23069
     RefSeq : NM_024108
     CCDS : CCDS12655.1
     Uniprot : O75865
     Interpro : O75865
     OMIM : 610396
     GeneTests : TRAPPC6A
     CGAP : TRAPPC6A

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  36529_at  0.29  9.70e-3  2.28e-2  0.43  1.52e-3  4.47e-3
 HG_U95  36530_g_at  -0.15  3.27e-1  4.33e-1  -0.29  8.13e-2  1.38e-1
 HG_U95  36531_r_at  -0.00  9.89e-1  9.93e-1  0.42  8.94e-2  1.49e-1
 HG_U133A  204985_s_at  0.19  2.56e-3  4.40e-3  -1.54  6.88e-41  1.35e-40
 HG_U133_Plus2  204985_s_at  0.26  3.47e-3  7.95e-3  0.27  6.19e-3  1.05e-2

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  204985_s_at  -0.00  9.94e-1  1.00e+0  0.08  6.02e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 36529_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U95 - 36530_g_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U95 - 36531_r_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204985_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204985_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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