IGDB.NSCLC Gene View
Gene Information Microarray Gene Expression Result Treatment Result Microarray Sample Data
 
Gene Information        (help)
Gene TRAPPC6A Ensembl ENSG00000007255 Chromosome 19 Start 50358027 End 50373325
Description Trafficking protein particle complex subunit 6A (TRAPP complex subunit 6A) [Source:UniProtKB/Swiss-Prot;Acc:O75865]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :
     HGNC : 23069
     Entrez Gene : 79090
     UCSC : uc002pav.2
     GeneCards : 23069
     RefSeq : NM_024108
     CCDS : CCDS12655.1
     Uniprot : O75865
     Interpro : O75865
     OMIM : 610396
     GeneTests : TRAPPC6A
     CGAP : TRAPPC6A

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  36529_at  0.29  9.70e-3  2.28e-2  0.43  1.52e-3  4.47e-3
 HG_U95  36530_g_at  -0.15  3.27e-1  4.33e-1  -0.29  8.13e-2  1.38e-1
 HG_U95  36531_r_at  -0.00  9.89e-1  9.93e-1  0.42  8.94e-2  1.49e-1
 HG_U133A  204985_s_at  0.19  2.56e-3  4.40e-3  -1.54  6.88e-41  1.35e-40
 HG_U133_Plus2  204985_s_at  0.26  3.47e-3  7.95e-3  0.27  6.19e-3  1.05e-2

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  204985_s_at  -0.00  9.94e-1  1.00e+0  0.08  6.02e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 36529_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U95 - 36530_g_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U95 - 36531_r_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204985_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204985_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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