IGDB.NSCLC Gene View
Gene Information
Microarray Gene Expression Result
Treatment Result
Microarray Sample Data
Gene Information
(help)
Gene
TRAPPC6A
Ensembl
ENSG00000007255
Chromosome
19
Start
50358027
End
50373325
Description
Trafficking protein particle complex subunit 6A (TRAPP complex subunit 6A) [Source:UniProtKB/Swiss-Prot;Acc:O75865]
GENE RESOURCES :
NUCLEOTIDE SEQUENCES :
PROTEIN RESOURCES :
CLINICAL RESOURCES :
HGNC : 23069
Entrez Gene : 79090
UCSC : uc002pav.2
GeneCards : 23069
RefSeq : NM_024108
CCDS : CCDS12655.1
Uniprot : O75865
Interpro : O75865
OMIM : 610396
GeneTests : TRAPPC6A
CGAP : TRAPPC6A
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Microarray Gene Expression Fold Change Result
(help)
(
red: up-regulation
/
green : down-regulation
when p value < 0.01)
( gray background : these probesets might have mapping problems.
ref 1
,
ref 2
)
Chip Type
Probeset
Adenocarcinoma
Squamous Cell Carcinoma
Fold Change
p value
q value
Fold Change
p value
q value
HG_U95
36529_at
0.29
9.70e-3
2.28e-2
0.43
1.52e-3
4.47e-3
HG_U95
36530_g_at
-0.15
3.27e-1
4.33e-1
-0.29
8.13e-2
1.38e-1
HG_U95
36531_r_at
-0.00
9.89e-1
9.93e-1
0.42
8.94e-2
1.49e-1
HG_U133A
204985_s_at
0.19
2.56e-3
4.40e-3
-1.54
6.88e-41
1.35e-40
HG_U133_Plus2
204985_s_at
0.26
3.47e-3
7.95e-3
0.27
6.19e-3
1.05e-2
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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result
(help)
(Pubmed)
(
red: up-regulation
/
green : down-regulation
when p value < 0.01)
( gray background color : the mapping problems of probeset.
ref_1
,
ref_2
)
Chip Type
Probeset
Adenocarcinoma
Squamous Cell Carcinoma
Fold Change
p value
q value
Fold Change
p value
q value
HG_U133A
204985_s_at
-0.00
9.94e-1
1.00e+0
0.08
6.02e-1
1.00e+0
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Microarray Sample Data
(help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
HG_U95
- 36529_at
(back)
HG_U95
- 36530_g_at
(back)
HG_U95
- 36531_r_at
(back)
HG_U133A
- 204985_s_at
(back)
HG_U133_Plus2
- 204985_s_at
(back)
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