IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene RTN2 Ensembl ENSG00000125744 Chromosome 19 Start 50680390 End 50692153
Description Reticulon-2 (Neuroendocrine-specific protein-like 1)(NSP-like protein 1)(NSPLI) [Source:UniProtKB/Swiss-Prot;Acc:O75298]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 10468
     Entrez Gene : 6253
     UCSC : uc002pcc.2
     GeneCards : 10468
     RefSeq : NM_005619
     CCDS : CCDS12665.1
     Uniprot : O75298
     Interpro : O75298
     OMIM : 603183
     GeneTests : RTN2
     CGAP : RTN2
     PMID : 8812484

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  34408_at  -0.13  1.52e-1  2.34e-1  -0.15  2.49e-1  3.47e-1
 HG_U133A  204217_s_at  0.15  1.91e-1  2.35e-1  1.91  1.05e-56  2.68e-56
 HG_U133A  34408_at  -0.27  7.93e-4  1.46e-3  -0.92  2.73e-17  3.81e-17
 HG_U133_Plus2  204217_s_at  0.07  6.01e-1  6.80e-1  -0.09  5.71e-1  6.27e-1
 HG_U133_Plus2  34408_at  0.27  9.88e-3  2.02e-2  0.12  3.07e-1  3.66e-1
 Stanford  11813  -0.45  5.55e-2  1.67e-1  -0.55  3.06e-2  1.21e-1
 Agilent_HS_21.6K  21608  -0.03  3.70e-1  5.58e-1  -0.07  5.20e-2  1.27e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  204217_s_at  0.45  1.09e-1  7.80e-1  -0.22  4.15e-1  1.00e+0
 HG_U133A  34408_at  0.09  6.61e-1  9.62e-1  -0.07  7.05e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 34408_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204217_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 34408_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204217_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 34408_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 11813    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 21608    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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