IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene NPAS1 Ensembl ENSG00000130751 Chromosome 19 Start 52214941 End 52240873
Description Neuronal PAS domain-containing protein 1 (Neuronal PAS1)(Member of PAS protein 5)(Basic-helix-loop-helix-PAS protein MOP5) [Source:UniProtKB/Swiss-Prot;Acc:Q99742]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 7894
     Entrez Gene : 4861
     UCSC : uc002pfy.2
     GeneCards : 7894
     RefSeq : NM_002517
     CCDS : CCDS12694.1
     Uniprot : Q99742
     Interpro : Q99742
     OMIM : 603346
     GeneTests : NPAS1
     CGAP : NPAS1
     PMID : 9012850

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  34652_at  -0.05  7.21e-1  7.95e-1  0.24  2.48e-1  3.47e-1
 HG_U133A  206699_x_at  0.29  4.10e-2  5.79e-2  3.12  2.68e-61  7.42e-61
 HG_U133A  216975_x_at  0.35  1.51e-2  2.29e-2  0.33  1.71e-3  1.90e-3
 HG_U133_Plus2  206699_x_at  0.23  2.36e-1  3.18e-1  0.58  7.44e-3  1.24e-2
 HG_U133_Plus2  216975_x_at  -0.13  5.21e-1  6.07e-1  0.22  3.18e-1  3.77e-1
 Agilent_HS_21.6K  9510  0.01  7.91e-1  8.82e-1  0.02  6.51e-1  7.68e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  206699_x_at  0.08  8.48e-1  9.88e-1  -0.39  2.15e-1  1.00e+0
 HG_U133A  216975_x_at  -0.23  6.77e-1  9.66e-1  0.50  1.84e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 34652_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 206699_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 216975_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 206699_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 216975_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 9510    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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