IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SEPW1 Ensembl ENSG00000178980 Chromosome 19 Start 52973654 End 52979753
Description Selenoprotein W (SelW) [Source:UniProtKB/Swiss-Prot;Acc:P63302]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 10752
     Entrez Gene : 6415
     UCSC : uc010xyw.1
     GeneCards : 10752
     RefSeq : NM_003009
     Uniprot : P63302
     Interpro : P63302
     OMIM : 603235
     GeneTests : SEPW1
     CGAP : SEPW1
     PMID : 9256076

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  39709_at  -0.31  3.53e-4  1.25e-3  -0.51  8.79e-6  4.49e-5
 HG_U133A  201194_at  -0.13  7.14e-2  9.62e-2  -0.69  2.04e-20  2.98e-20
 HG_U133_Plus2  1555851_s_at  0.16  7.34e-2  1.17e-1  -0.06  6.27e-1  6.79e-1
 HG_U133_Plus2  201194_at  0.01  9.46e-1  9.62e-1  -0.35  9.18e-4  1.78e-3
 Stanford  2813  0.05  8.86e-1  9.39e-1  -0.84  2.41e-2  1.16e-1
 Agilent_HS_21.6K  6831  0.07  4.41e-1  6.24e-1  -0.13  6.92e-2  1.57e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  201194_at  -0.22  4.54e-1  9.15e-1  0.06  6.51e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 39709_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201194_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1555851_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201194_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 2813    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 6831    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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Cancer Gene Index        (help)

If 0 entry was found, please remove the search key "lung cancer".
Keyword DiseaseData Statement PubMed Organism
sepw1 tumors Examples of overexpressed transcripts in tumors from both species include proliferation-related genes such as CCND1, CKS1B, and STMN1 (oncoprotein 18); and genes related to other functions such as SEPW1, SDFR1, DNCI2, and SP110. 15520179 Human

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