IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SYNGR4 Ensembl ENSG00000105467 Chromosome 19 Start 53559469 End 53571439
Description Synaptogyrin-4 [Source:UniProtKB/Swiss-Prot;Acc:O95473]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :
     HGNC : 11502
     Entrez Gene : 23546
     UCSC : uc002piz.2
     GeneCards : 11502
     RefSeq : NM_012451
     CCDS : CCDS12717.1
     Uniprot : O95473
     Interpro : O95473
     OMIM : 608373
     GeneTests : SYNGR4
     CGAP : SYNGR4

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  34495_r_at  0.19  1.84e-1  2.73e-1  0.07  7.62e-1  8.27e-1
 HG_U133A  206719_at  -0.31  4.00e-4  7.70e-4  -1.25  5.43e-18  7.65e-18
 HG_U133_Plus2  206719_at  0.70  6.17e-5  2.04e-4  0.69  1.21e-3  2.30e-3
 Agilent_HS_21.6K  5802  0.01  9.36e-1  9.65e-1  0.03  7.59e-1  8.47e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  206719_at  0.45  3.18e-1  8.81e-1  -0.13  5.96e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 34495_r_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 206719_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 206719_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 5802    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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