IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene GYS1 Ensembl ENSG00000104812 Chromosome 19 Start 54163195 End 54188361
Description Glycogen [starch] synthase, muscle (EC 2.4.1.11) [Source:UniProtKB/Swiss-Prot;Acc:P13807]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :
     HGNC : 4706
     Entrez Gene : 2997
     UCSC : uc002plp.2
     GeneCards : 4706
     RefSeq : NM_001161587
     CCDS : CCDS12747.1
     Uniprot : P13807
     Interpro : P13807
     OMIM : 138570
     GeneTests : GYS1
     CGAP : GYS1

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  37299_at  0.20  2.91e-3  8.05e-3  0.49  1.53e-7  1.13e-6
 HG_U133A  201673_s_at  0.13  4.19e-3  6.97e-3  -0.00  9.36e-1  9.38e-1
 HG_U133_Plus2  201673_s_at  0.52  3.09e-8  1.76e-7  1.29  1.85e-18  2.16e-17
 Stanford  15146  1.03  3.58e-6  3.33e-4  1.06  3.81e-4  7.07e-3
 Agilent_HS_21.6K  3577  -0.02  4.32e-1  6.16e-1  0.04  1.16e-1  2.31e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  201673_s_at  0.31  7.60e-2  7.41e-1  0.14  3.16e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 37299_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201673_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201673_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 15146    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 3577    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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