IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene PPFIA3 Ensembl ENSG00000177380 Chromosome 19 Start 54314475 End 54346090
Description Liprin-alpha-3 (Protein tyrosine phosphatase receptor type f polypeptide-interacting protein alpha-3)(PTPRF-interacting protein alpha-3) [Source:UniProtKB/Swiss-Prot;Acc:O75145]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 9247
     Entrez Gene : 8541
     UCSC : uc002pmr.2
     GeneCards : 9247
     RefSeq : NM_003660
     CCDS : CCDS12758.1
     Uniprot : O75145
     Interpro : O75145
     OMIM : 603144
     GeneTests : PPFIA3
     CGAP : PPFIA3
     PMID : 9624153

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  41435_at  0.20  7.29e-2  1.27e-1  0.03  8.29e-1  8.79e-1
 HG_U133A  213368_x_at  -0.06  5.76e-1  6.25e-1  1.15  2.77e-23  4.22e-23
 HG_U133A  215280_s_at  0.03  6.24e-1  6.69e-1  -0.63  2.54e-6  2.99e-6
 HG_U133_Plus2  213368_x_at  0.12  4.21e-1  5.11e-1  0.57  2.45e-4  5.16e-4
 HG_U133_Plus2  215280_s_at  -0.12  4.04e-1  4.94e-1  0.11  4.85e-1  5.45e-1
 Stanford  5721  0.06  8.61e-1  9.24e-1  0.68  7.17e-2  2.18e-1
 Agilent_HS_21.6K  5473  0.03  7.75e-1  8.72e-1  0.03  6.51e-1  7.68e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  213368_x_at  0.20  5.64e-1  9.43e-1  -0.12  5.75e-1  1.00e+0
 HG_U133A  215280_s_at  0.12  6.09e-1  9.53e-1  -0.01  9.39e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 41435_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 213368_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 215280_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 213368_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 215280_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 5721    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 5473    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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