IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene HRC Ensembl ENSG00000130528 Chromosome 19 Start 54346270 End 54350493
Description Sarcoplasmic reticulum histidine-rich calcium-binding protein Precursor [Source:UniProtKB/Swiss-Prot;Acc:P23327]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 5178
     Entrez Gene : 3270
     UCSC : uc002pmv.2
     GeneCards : 5178
     RefSeq : NM_002152
     CCDS : CCDS12759.1
     Uniprot : P23327
     Interpro : P23327
     OMIM : 142705
     GeneTests : HRC
     CGAP : HRC
     PMID : 2037293

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  34976_at  -0.04  8.12e-1  8.67e-1  -0.34  1.11e-1  1.79e-1
 HG_U133A  207066_at  -1.20  4.35e-17  2.75e-16  -2.16  1.99e-27  3.23e-27
 HG_U133_Plus2  207066_at  -0.22  1.71e-1  2.42e-1  -0.78  5.05e-6  1.35e-5
 Agilent_HS_21.6K  8980  -0.01  5.81e-1  7.38e-1  0.01  5.95e-1  7.26e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  207066_at  0.35  4.89e-1  9.26e-1  -0.36  2.58e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 34976_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 207066_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 207066_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 8980    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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