IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene ATF5 Ensembl ENSG00000169136 Chromosome 19 Start 55124272 End 55129003
Description Cyclic AMP-dependent transcription factor ATF-5 (Activating transcription factor 5)(Transcription factor ATFx) [Source:UniProtKB/Swiss-Prot;Acc:Q9Y2D1]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 790
     Entrez Gene : 22809
     UCSC : uc010enq.1
     GeneCards : 790
     RefSeq : NM_012068
     CCDS : CCDS12789.1
     Uniprot : Q9Y2D1
     Interpro : Q9Y2D1
     OMIM : 606398
     GeneTests : ATF5
     CGAP : ATF5
     PMID : 10373550

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  39158_at  0.51  3.48e-8  3.11e-7  0.87  3.72e-7  2.54e-6
 HG_U133A  204998_s_at  0.72  9.63e-23  9.23e-22  -0.53  4.65e-14  6.20e-14
 HG_U133A  204999_s_at  0.55  1.67e-11  6.78e-11  2.53  1.31e-79  5.26e-79
 HG_U133A  217389_s_at  -0.15  2.38e-1  2.86e-1  -0.70  1.71e-4  1.93e-4
 HG_U133_Plus2  204998_s_at  0.34  2.04e-3  4.93e-3  1.01  2.85e-14  2.06e-13
 HG_U133_Plus2  204999_s_at  0.13  2.71e-1  3.56e-1  0.53  2.14e-3  3.90e-3
 HG_U133_Plus2  217389_s_at  0.43  4.50e-3  1.00e-2  0.77  6.37e-6  1.67e-5
 HG_U133_Plus2  230938_x_at  0.08  5.96e-1  6.75e-1  0.54  8.76e-4  1.70e-3
 Stanford  16031  0.27  3.12e-1  5.15e-1  1.02  2.32e-2  1.16e-1
 Agilent_HS_21.6K  5590  -0.04  4.05e-1  5.91e-1  -0.03  6.29e-1  7.51e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  204998_s_at  0.39  6.00e-2  7.23e-1  0.27  2.20e-1  1.00e+0
 HG_U133A  204999_s_at  0.00  9.96e-1  1.00e+0  0.13  5.41e-1  1.00e+0
 HG_U133A  217389_s_at  -0.40  2.70e-1  8.63e-1  -0.08  7.93e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 39158_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204998_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204999_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 217389_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204998_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204999_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 217389_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 230938_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 16031    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 5590    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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