IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene COG5 Ensembl ENSG00000164597 Chromosome 7 Start 106630227 End 106991721
Description Conserved oligomeric Golgi complex subunit 5 (COG complex subunit 5)(Component of oligomeric Golgi complex 5)(13S Golgi transport complex 90 kDa subunit)(GTC-90)(Golgi transport complex 1) [Source:UniProtKB/Swiss-Prot;Acc:Q9UP83]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 14857
     Entrez Gene : 10466
     UCSC : uc003vec.2
     GeneCards : 14857
     RefSeq : NM_001161520
     CCDS : CCDS5742.1
     Uniprot : Q9UP83
     Interpro : Q9UP83
     OMIM : 606821
     GeneTests : COG5
     CGAP : COG5
     PMID : 9792665

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  34737_at  0.11  3.65e-1  4.73e-1  -0.04  7.54e-1  8.21e-1
 HG_U133A  203629_s_at  0.09  1.81e-1  2.24e-1  1.37  1.84e-59  4.91e-59
 HG_U133A  203630_s_at  0.47  8.28e-11  3.17e-10  -0.82  7.21e-14  9.58e-14
 HG_U133_Plus2  203629_s_at  0.22  6.23e-3  1.34e-2  0.15  7.42e-2  1.02e-1
 HG_U133_Plus2  203630_s_at  0.62  3.53e-21  9.30e-20  0.66  7.26e-21  1.11e-19
 HG_U133_Plus2  227089_at  -0.20  2.82e-2  5.11e-2  -0.43  4.47e-5  1.05e-4
 Agilent_HS_21.6K  15050  0.06  1.19e-2  5.21e-2  0.06  1.41e-2  4.70e-2

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  203629_s_at  -0.01  9.63e-1  9.98e-1  0.02  8.91e-1  1.00e+0
 HG_U133A  203630_s_at  -0.24  2.84e-1  8.70e-1  -0.10  5.27e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 34737_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 203629_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 203630_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 203629_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 203630_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 227089_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 15050    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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