IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene GBAS Ensembl ENSG00000146729 Chromosome 7 Start 55999790 End 56035365
Description Protein NipSnap homolog 2 (NipSnap2)(Glioblastoma-amplified sequence) [Source:UniProtKB/Swiss-Prot;Acc:O75323]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 4179
     Entrez Gene : 2631
     UCSC : uc003tre.1
     GeneCards : 4179
     RefSeq : NM_001483
     CCDS : CCDS5521.1
     Uniprot : O75323
     Interpro : O75323
     OMIM : 603004
     GeneTests : GBAS
     CGAP : GBAS
     PMID : 9615231

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  39793_at  0.04  7.72e-1  8.35e-1  -0.17  2.63e-1  3.63e-1
 HG_U133A  201816_s_at  0.29  9.76e-4  1.78e-3  -0.06  4.88e-1  4.99e-1
 HG_U133_Plus2  201816_s_at  -0.03  7.44e-1  8.02e-1  -0.30  5.63e-3  9.59e-3
 HG_U133_Plus2  232285_at  0.61  2.91e-4  8.47e-4  0.62  1.17e-3  2.22e-3
 Agilent_HS_21.6K  187  0.22  1.07e-2  4.81e-2  0.14  7.45e-3  2.83e-2

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  201816_s_at  -0.57  1.19e-1  7.87e-1  -0.04  9.04e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 39793_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201816_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201816_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 232285_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 187    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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Cancer Gene Index        (help)

If 0 entry was found, please remove the search key "lung cancer".
Keyword DiseaseData Statement PubMed Organism
gbas tumors Here we report the identification of and coding sequence for a novel gene, GBAS, that is localized to this region and was found to be amplified in 2 of 12 tumors as well as in 2 of 3 cell lines with EGFR amplification. 9615231 Human

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