IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene CCT6A Ensembl ENSG00000146731 Chromosome 7 Start 56086872 End 56099176
Description T-complex protein 1 subunit zeta (TCP-1-zeta)(CCT-zeta)(CCT-zeta-1)(Tcp20)(HTR3)(Acute morphine dependence-related protein 2) [Source:UniProtKB/Swiss-Prot;Acc:P40227]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 1620
     Entrez Gene : 908
     UCSC : uc003trl.1
     GeneCards : 1620
     RefSeq : NM_001009186
     CCDS : CCDS5523.1
     Uniprot : P40227
     Interpro : P40227
     OMIM : 104613
     GeneTests : CCT6A
     CGAP : CCT6A
     PMID : 1352881

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  38416_at  0.25  3.37e-2  6.61e-2  0.43  8.90e-4  2.80e-3
 HG_U133A  201326_at  0.44  5.08e-7  1.35e-6  0.01  9.00e-1  9.03e-1
 HG_U133A  201327_s_at  1.02  1.55e-42  4.95e-41  1.80  2.32e-76  8.63e-76
 HG_U133_Plus2  201326_at  0.41  4.52e-8  2.52e-7  0.74  1.77e-11  9.28e-11
 HG_U133_Plus2  201327_s_at  0.50  4.50e-9  2.87e-8  0.71  9.23e-11  4.45e-10
 Stanford  3594  1.00  5.65e-3  4.41e-2  0.98  4.64e-3  4.06e-2
 Stanford  14157  1.09  3.56e-4  7.45e-3  0.99  8.05e-3  5.92e-2
 Stanford  16844  -1.31  1.15e-5  7.90e-4  -1.08  8.67e-5  2.47e-3
 Agilent_HS_21.6K  10987  0.32  2.91e-3  1.79e-2  0.44  3.01e-7  5.60e-6

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  201326_at  -0.36  1.81e-1  8.22e-1  0.15  5.41e-1  1.00e+0
 HG_U133A  201327_s_at  -0.32  3.91e-1  8.96e-1  0.00  9.97e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 38416_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201326_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 201327_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201326_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 201327_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 3594    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 14157    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 16844    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 10987    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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