IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SMC2 Ensembl ENSG00000136824 Chromosome 9 Start 105896362 End 105943519
Description Structural maintenance of chromosomes protein 2 (Chromosome-associated protein E)(hCAP-E)(XCAP-E homolog) [Source:UniProtKB/Swiss-Prot;Acc:O95347]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 14011
     Entrez Gene : 10592
     UCSC : uc004bbw.2
     GeneCards : 14011
     RefSeq : NM_001042550
     CCDS : CCDS35086.1
     Uniprot : O95347
     Interpro : O95347
     OMIM : 605576
     GeneTests : SMC2
     CGAP : SMC2
     PMID : 9789013

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  37502_at  0.01  9.69e-1  9.78e-1  0.55  1.27e-1  2.00e-1
 HG_U133A  204240_s_at  0.95  1.65e-17  1.07e-16  1.48  1.08e-20  1.59e-20
 HG_U133A  213253_at  0.37  1.42e-4  2.90e-4  1.62  3.29e-47  7.15e-47
 HG_U133_Plus2  204240_s_at  0.49  2.86e-4  8.32e-4  1.14  2.98e-12  1.72e-11
 HG_U133_Plus2  213253_at  0.12  3.05e-1  3.93e-1  0.66  1.75e-6  4.97e-6

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  204240_s_at  0.23  5.77e-1  9.48e-1  0.04  9.27e-1  1.00e+0
 HG_U133A  213253_at  -0.11  7.56e-1  9.75e-1  0.54  5.47e-2  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 37502_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204240_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 213253_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204240_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 213253_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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