IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SLC44A1 Ensembl ENSG00000070214 Chromosome 9 Start 107046724 End 107241273
Description Choline transporter-like protein 1 (Solute carrier family 44 member 1)(CDw92)(CD92 antigen) [Source:UniProtKB/Swiss-Prot;Acc:Q8WWI5]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 18798
     Entrez Gene : 23446
     UCSC : uc004bcn.2
     GeneCards : 18798
     RefSeq : NM_080546
     CCDS : CCDS6763.1
     Uniprot : Q8WWI5
     Interpro : Q8WWI5
     OMIM : 606105
     GeneTests : SLC44A1
     CGAP : SLC44A1
     PMID : 11698453

< Top >


Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  222364_at  -0.26  7.85e-2  1.05e-1  1.67  4.65e-28  7.59e-28
 HG_U133_Plus2  222364_at  -0.88  5.99e-10  4.32e-9  -0.57  1.60e-5  3.99e-5
 HG_U133_Plus2  224595_at  0.98  8.54e-13  8.85e-12  1.95  1.30e-30  6.49e-29
 HG_U133_Plus2  224596_at  0.43  4.05e-9  2.60e-8  0.93  2.51e-22  4.54e-21
 HG_U133_Plus2  227620_at  -1.19  1.42e-23  4.86e-22  -1.08  1.83e-19  2.39e-18
 HG_U133_Plus2  228485_s_at  -0.28  1.03e-2  2.09e-2  0.21  8.80e-2  1.20e-1
 HG_U133_Plus2  228486_at  -0.86  8.13e-11  6.55e-10  -1.25  4.61e-15  3.64e-14

< Top >


Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  222364_at  -1.08  1.16e-1  7.84e-1  0.44  2.86e-1  1.00e+0

< Top >


Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133A - 222364_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 222364_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 224595_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 224596_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 227620_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 228485_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 228486_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

< Top >


Download all image files.
Save all PNG files.    Save all PDF files.    Save all PS files.