IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene SVEP1 Ensembl ENSG00000165124 Chromosome 9 Start 112167352 End 112381981
Description Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 Precursor (Polydom)(Selectin-like osteoblast-derived protein)(SEL-OB)(CCP module-containing protein 22)(Serologically defined breast cancer antigen NY-BR-38) [Source:UniProtKB/Swiss-Prot;Acc:Q4LDE5]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :
     HGNC : 15985
     Entrez Gene : 79987
     UCSC : uc010mtz.2
     GeneCards : 15985
     RefSeq : NM_153366
     CCDS : CCDS48004.1
     Uniprot : Q8NBT9
     Interpro : Q8NBT9
     OMIM : 611691
     GeneTests : SVEP1
     CGAP : SVEP1

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  38786_at  -1.78  3.22e-22  2.88e-20  -1.84  2.92e-16  1.20e-14
 HG_U133A  213247_at  -2.68  4.40e-54  2.73e-52  -0.78  5.60e-23  8.48e-23
 HG_U133A  219552_at  -0.63  1.53e-5  3.47e-5  0.13  3.72e-1  3.82e-1
 HG_U133_Plus2  1553129_at  -1.00  8.40e-7  3.85e-6  -1.21  2.36e-8  8.49e-8
 HG_U133_Plus2  1566622_at  0.38  8.66e-2  1.35e-1  0.85  9.40e-4  1.82e-3
 HG_U133_Plus2  1566721_at  -0.26  6.77e-2  1.09e-1  -0.15  3.29e-1  3.89e-1
 HG_U133_Plus2  1566722_a_at  -0.84  1.70e-4  5.17e-4  -1.22  1.29e-6  3.73e-6
 HG_U133_Plus2  213247_at  -2.59  9.07e-35  1.05e-32  -2.28  5.59e-27  1.77e-25
 HG_U133_Plus2  219552_at  -1.78  2.61e-16  4.10e-15  -2.70  2.80e-24  6.36e-23
 HG_U133_Plus2  224543_at  0.40  1.22e-2  2.43e-2  1.12  1.95e-8  7.09e-8
 HG_U133_Plus2  236927_at  -0.69  9.20e-9  5.65e-8  -0.41  2.72e-3  4.88e-3

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  213247_at  1.23  4.36e-2  7.08e-1  0.19  6.07e-1  1.00e+0
 HG_U133A  219552_at  0.21  7.17e-1  9.71e-1  0.15  5.67e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 38786_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 213247_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 219552_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1553129_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1566622_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1566721_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1566722_a_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 213247_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 219552_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 224543_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 236927_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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Cancer Gene Index        (help)

If 0 entry was found, please remove the search key "lung cancer".
Keyword DiseaseData Statement PubMed Organism
svep1 primary tumor SVEP1 was identified also in breast carcinoma (BC) cells known to reside in bone when metastasized from the primary tumor. 17139625 Human
svep1 breast carcinoma (bc) SVEP1 was identified also in breast carcinoma (BC) cells known to reside in bone when metastasized from the primary tumor. 17139625 Human

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