IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene PRPF4 Ensembl ENSG00000136875 Chromosome 9 Start 115077444 End 115095287
Description U4/U6 small nuclear ribonucleoprotein Prp4 (U4/U6 snRNP 60 kDa protein)(WD splicing factor Prp4)(hPrp4)(PRP4 homolog) [Source:UniProtKB/Swiss-Prot;Acc:O43172]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 17349
     Entrez Gene : 9128
     UCSC : uc004bgx.2
     GeneCards : 17349
     RefSeq : NM_004697
     CCDS : CCDS6791.1
     Uniprot : O43172
     Interpro : O43172
     OMIM : 607795
     GeneTests : PRPF4
     CGAP : PRPF4
     PMID : 9257651

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  37935_at  0.07  3.53e-1  4.60e-1  0.66  1.17e-8  1.07e-7
 HG_U95  37936_at  0.24  5.70e-4  1.92e-3  0.73  1.59e-9  1.70e-8
 HG_U133A  209161_at  0.54  3.49e-16  2.06e-15  1.66  1.46e-44  3.03e-44
 HG_U133A  209162_s_at  1.10  1.52e-32  2.80e-31  3.50  1.90e-92  1.05e-91
 HG_U133_Plus2  209161_at  0.26  5.99e-4  1.63e-3  0.90  5.79e-16  5.08e-15
 HG_U133_Plus2  209162_s_at  0.22  1.08e-1  1.64e-1  0.95  3.13e-12  1.80e-11
 Agilent_HS_21.6K  775  0.02  5.96e-1  7.50e-1  0.07  1.23e-1  2.42e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  209161_at  0.25  2.53e-1  8.54e-1  -0.05  8.36e-1  1.00e+0
 HG_U133A  209162_s_at  0.01  9.76e-1  9.99e-1  -0.16  4.25e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 37935_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U95 - 37936_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 209161_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 209162_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 209161_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 209162_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 775    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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