IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene COL27A1 Ensembl ENSG00000196739 Chromosome 9 Start 115957661 End 116114612
Description Collagen alpha-1(XXVII) chain Precursor [Source:UniProtKB/Swiss-Prot;Acc:Q8IZC6]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 22986
     Entrez Gene : 85301
     UCSC : uc011lxl.1
     GeneCards : 22986
     RefSeq : NM_032888
     CCDS : CCDS6802.1
     Uniprot : Q8IZC6
     Interpro : Q8IZC6
     OMIM : 608461
     GeneTests : COL27A1
     CGAP : COL27A1
     PMID : 12766169

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133_Plus2  1564008_at  -0.07  7.31e-1  7.92e-1  0.58  1.13e-2  1.83e-2
 HG_U133_Plus2  225288_at  0.04  7.85e-1  8.36e-1  0.82  5.58e-7  1.69e-6
 HG_U133_Plus2  225292_at  0.22  9.45e-2  1.46e-1  0.74  4.78e-7  1.46e-6
 HG_U133_Plus2  225293_at  0.31  2.23e-2  4.15e-2  1.15  6.74e-16  5.87e-15
 HG_U133_Plus2  230603_at  0.41  3.31e-2  5.88e-2  1.05  1.85e-5  4.56e-5
 HG_U133_Plus2  237452_at  0.05  6.99e-1  7.65e-1  0.07  6.74e-1  7.21e-1
 Agilent_HS_21.6K  1527  -0.04  3.17e-1  5.05e-1  -0.03  5.64e-1  7.01e-1
 Agilent_HS_21.6K  12620  0.16  2.54e-2  9.02e-2  0.20  3.32e-2  9.06e-2

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133_Plus2 - 1564008_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 225288_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 225292_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 225293_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 230603_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 237452_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 1527    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 12620    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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