IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene PSMD5 Ensembl ENSG00000095261 Chromosome 9 Start 122617595 End 122645027
Description 26S proteasome non-ATPase regulatory subunit 5 (26S proteasome subunit S5B)(26S protease subunit S5 basic) [Source:UniProtKB/Swiss-Prot;Acc:Q16401]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 9563
     Entrez Gene : 5711
     UCSC : uc004bko.2
     GeneCards : 9563
     RefSeq : NM_005047
     CCDS : CCDS6824.1
     Uniprot : Q16401
     Interpro : Q16401
     OMIM : 604452
     GeneTests : PSMD5
     CGAP : PSMD5
     PMID : 7559544

< Top >


Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  32240_at  0.31  2.44e-6  1.46e-5  0.44  1.49e-6  8.98e-6
 HG_U133A  203447_at  0.32  3.99e-9  1.31e-8  0.24  3.08e-4  3.47e-4
 HG_U133A  215546_at  -0.07  6.13e-1  6.60e-1  3.46  1.13e-78  4.45e-78
 HG_U133_Plus2  1561640_at  -0.41  5.58e-4  1.53e-3  -0.49  4.10e-6  1.11e-5
 HG_U133_Plus2  203447_at  0.23  8.48e-5  2.73e-4  0.32  4.38e-4  8.92e-4
 HG_U133_Plus2  215546_at  0.25  1.96e-1  2.71e-1  0.61  3.81e-3  6.68e-3
 Stanford  3797  0.87  9.85e-4  1.45e-2  0.75  1.43e-2  8.82e-2
 Stanford  16434  0.62  6.42e-3  4.81e-2  0.66  9.18e-3  6.49e-2
 Agilent_HS_21.6K  4641  0.03  3.91e-1  5.78e-1  0.05  1.99e-1  3.43e-1
 Agilent_HS_21.6K  9181  0.02  3.56e-1  5.44e-1  0.02  2.67e-1  4.22e-1
 Agilent_HS_21.6K  16607  -0.03  1.70e-1  3.35e-1  -0.02  3.65e-1  5.26e-1

< Top >


Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  203447_at  -0.10  5.44e-1  9.38e-1  0.01  9.51e-1  1.00e+0
 HG_U133A  215546_at  -0.94  4.67e-2  7.08e-1  -0.48  1.85e-1  1.00e+0

< Top >


Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 32240_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 203447_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 215546_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 1561640_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 203447_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 215546_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 3797    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Stanford - 16434    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 4641    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 9181    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 16607    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

< Top >


Download all image files.
Save all PNG files.    Save all PDF files.    Save all PS files.