IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene LHX6 Ensembl ENSG00000106852 Chromosome 9 Start 124004677 End 124031041
Description LIM/homeobox protein Lhx6.1 (LIM homeobox protein 6.1)(Lhx6) [Source:UniProtKB/Swiss-Prot;Acc:Q9UPM6]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 21735
     Entrez Gene : 26468
     UCSC : uc004blx.3
     GeneCards : 21735
     RefSeq : NM_014368
     CCDS : CCDS6837.2
     Uniprot : Q9UPM6
     Interpro : Q9UPM6
     OMIM : 608215
     GeneTests : LHX6
     CGAP : LHX6
     PMID : 10393337

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  219884_at  -1.01  4.04e-23  3.97e-22  -0.97  1.22e-19  1.76e-19
 HG_U133_Plus2  219884_at  -0.56  1.07e-6  4.79e-6  -0.42  1.50e-2  2.37e-2
 HG_U133_Plus2  224556_s_at  -0.17  2.29e-1  3.10e-1  -0.18  2.91e-1  3.49e-1
 Agilent_HS_21.6K  432  -0.11  4.36e-4  3.91e-3  -0.09  5.68e-2  1.36e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  219884_at  0.49  1.56e-1  8.12e-1  0.81  2.82e-2  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U133A - 219884_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 219884_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 224556_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 432    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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Cancer Gene Index        (help)

If 0 entry was found, please remove the search key "lung cancer".
Keyword DiseaseData Statement PubMed Organism
lhx6 head and neck carcinomas LHX6 is a sensitive methylation marker in head and neck carcinomas. 16732332 Human

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