IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene GAPVD1 Ensembl ENSG00000165219 Chromosome 9 Start 127063929 End 127169307
Description GTPase-activating protein and VPS9 domain-containing protein 1 (Rab5-activating protein 6)(GAPex-5) [Source:UniProtKB/Swiss-Prot;Acc:Q14C86]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :
     HGNC : 23375
     Entrez Gene : 26130
     UCSC : uc004bpp.2
     GeneCards : 23375
     RefSeq : NM_015635
     CCDS : CCDS35138.1
     Uniprot : Q8WU86
     Interpro : Q8WU86
     OMIM : 611714
     GeneTests : GAPVD1
     CGAP : GAPVD1

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  40801_at  -0.70  9.68e-8  7.96e-7  -0.90  4.50e-7  3.02e-6
 HG_U95  40802_at  -0.05  6.77e-1  7.59e-1  0.06  7.12e-1  7.88e-1
 HG_U133A  212802_s_at  -0.58  1.02e-24  1.11e-23  -0.68  5.05e-40  9.79e-40
 HG_U133A  212804_s_at  0.11  6.68e-2  9.05e-2  1.67  1.08e-70  3.56e-70
 HG_U133A  214869_x_at  0.02  6.32e-1  6.77e-1  -4.76  4.96e-148  1.56e-146
 HG_U133_Plus2  212802_s_at  -0.52  6.38e-16  9.57e-15  -0.50  1.08e-11  5.81e-11
 HG_U133_Plus2  212804_s_at  -0.04  7.19e-1  7.82e-1  -0.28  4.94e-3  8.49e-3
 HG_U133_Plus2  214869_x_at  0.28  1.61e-4  4.93e-4  0.54  4.88e-12  2.74e-11

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  212802_s_at  -0.10  6.08e-1  9.53e-1  0.03  8.44e-1  1.00e+0
 HG_U133A  212804_s_at  -0.08  6.95e-1  9.68e-1  0.06  7.26e-1  1.00e+0
 HG_U133A  214869_x_at  -0.22  1.27e-1  7.93e-1  -0.08  4.32e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 40801_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U95 - 40802_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 212802_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 212804_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 214869_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 212802_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 212804_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 214869_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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