IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene ST6GALNAC4 Ensembl ENSG00000136840 Chromosome 9 Start 129709987 End 129719126
Description Alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3-N-acetyl-galactosaminide alpha-2,6-sialyltransferase (EC 2.4.99.7)(NeuAc-alpha-2,3-Gal-beta-1,3-GalNAc-alpha-2,6-sialyltransferase)(ST6GalNAc IV)(Sialyltransferase 7D)(Sialyltransferase 3C) [Source:UniProtKB/Swiss-Prot;Acc:Q9H4F1]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 17846
     Entrez Gene : 27090
     UCSC : uc004bss.2
     GeneCards : 17846
     RefSeq : NM_175039
     CCDS : CCDS6883.1
     Uniprot : Q9H4F1
     Interpro : Q9H4F1
     OMIM : 606378
     GeneTests : ST6GALNAC4
     CGAP : ST6GALNAC4
     PMID : 10207017

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  34779_at  0.06  4.66e-1  5.72e-1  -0.34  5.91e-4  1.95e-3
 HG_U133A  220937_s_at  0.71  1.71e-10  6.41e-10  -1.71  2.77e-30  4.68e-30
 HG_U133A  221551_x_at  0.30  1.19e-3  2.14e-3  -0.49  8.24e-13  1.08e-12
 HG_U133_Plus2  220937_s_at  0.20  4.87e-2  8.24e-2  -0.04  6.64e-1  7.13e-1
 HG_U133_Plus2  221551_x_at  0.36  2.79e-3  6.54e-3  -0.12  4.28e-1  4.89e-1
 HG_U133_Plus2  223285_s_at  0.37  8.84e-2  1.38e-1  -0.15  5.29e-1  5.88e-1
 HG_U133_Plus2  228163_at  -0.07  7.14e-1  7.77e-1  -0.02  9.30e-1  9.44e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  220937_s_at  0.76  1.61e-2  6.83e-1  -0.20  1.77e-1  1.00e+0
 HG_U133A  221551_x_at  0.58  1.23e-1  7.92e-1  -0.32  1.15e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 34779_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 220937_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 221551_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 220937_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 221551_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 223285_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 228163_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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