IGDB.NSCLC Gene View
 
Gene Information        (help)
Gene C9orf16 Ensembl ENSG00000171159 Chromosome 9 Start 129962360 End 129966028
Description UPF0184 protein C9orf16 [Source:UniProtKB/Swiss-Prot;Acc:Q9BUW7]
GENE RESOURCES :NUCLEOTIDE SEQUENCES :PROTEIN RESOURCES :CLINICAL RESOURCES :REFERENCES :
     HGNC : 17823
     Entrez Gene : 79095
     UCSC : uc004btp.1
     GeneCards : 17823
     RefSeq : NM_024112
     CCDS : CCDS6893.1
     Uniprot : Q9BUW7
     Interpro : Q9BUW7
     GeneTests : C9orf16
     CGAP : C9orf16
     PMID : 10369878

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Microarray Gene Expression Fold Change Result        (help)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background : these probesets might have mapping problems. ref 1, ref 2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U95  41047_at  0.23  3.48e-3  9.40e-3  0.47  6.92e-6  3.61e-5
 HG_U133A  204480_s_at  0.08  2.45e-1  2.95e-1  -2.11  7.81e-84  3.48e-83
 HG_U133A  222165_x_at  0.17  6.54e-2  8.88e-2  -4.15  2.15e-82  9.23e-82
 HG_U133A  222166_at  -0.28  2.11e-3  3.66e-3  -0.21  1.02e-1  1.07e-1
 HG_U133A  41047_at  0.14  2.03e-2  3.02e-2  -5.15  3.55e-96  2.16e-95
 HG_U133_Plus2  204480_s_at  0.84  6.88e-11  5.59e-10  1.52  3.85e-18  4.33e-17
 HG_U133_Plus2  222165_x_at  0.56  2.31e-7  1.16e-6  1.11  2.02e-15  1.66e-14
 HG_U133_Plus2  222166_at  0.25  2.10e-1  2.88e-1  0.19  4.25e-1  4.87e-1
 HG_U133_Plus2  41047_at  0.82  3.11e-15  4.32e-14  1.18  9.31e-18  1.00e-16
 Agilent_HS_21.6K  9093  0.04  3.43e-1  5.31e-1  0.06  1.16e-1  2.30e-1

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Adjuvant Cisplatin/vinorelbine Treatment vs Observation Result        (help) (Pubmed)
( red: up-regulation / green : down-regulation when p value < 0.01)
( gray background color : the mapping problems of probeset. ref_1, ref_2)
Chip Type Probeset Adenocarcinoma Squamous Cell Carcinoma
Fold Change p value q value Fold Change p value q value
 HG_U133A  204480_s_at  0.35  1.22e-1  7.91e-1  -0.05  7.55e-1  1.00e+0
 HG_U133A  222165_x_at  0.16  5.75e-1  9.48e-1  -0.09  5.86e-1  1.00e+0
 HG_U133A  222166_at  0.37  3.47e-1  8.87e-1  -0.19  5.22e-1  1.00e+0
 HG_U133A  41047_at  0.27  2.14e-1  8.38e-1  -0.05  7.53e-1  1.00e+0

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Microarray Sample Data        (help)
( The log2 value of tumor samples )
(Average : Average log2 value from Normal Samples.)
        HG_U95 - 41047_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 204480_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 222165_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 222166_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133A - 41047_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 204480_s_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 222165_x_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 222166_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        HG_U133_Plus2 - 41047_at    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

        Agilent_HS_21.6K - 9093    (back)       Save as a PNG file. Save as a PDF file. Save as a PS file.
Gene expression figure

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